Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC1.34□□□□□ -2.19
PHRF1Q9P1Y6 MIR1264-201ENST00000616374 69 ntBASIC1.34□□□□□ -2.19
PHRF1Q9P1Y6 ZNF663P-202ENST00000641770 1131 ntBASIC1.34□□□□□ -2.19
PHRF1Q9P1Y6 AL442644.1-201ENST00000454390 3105 ntBASIC1.34□□□□□ -2.19
PHRF1Q9P1Y6 CR848007.1-201ENST00000442354 1699 ntBASIC1.34□□□□□ -2.2
PHRF1Q9P1Y6 TPTE2P4-201ENST00000258589 1605 ntBASIC1.34□□□□□ -2.2
PHRF1Q9P1Y6 RNU6-37P-201ENST00000362692 107 ntBASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 RNU6-11P-201ENST00000364234 107 ntBASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 MIR493-201ENST00000385254 89 ntBASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 AC092047.1-201ENST00000424997 240 ntBASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 ARF4P4-201ENST00000439608 520 ntBASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 GDI2P2-201ENST00000445131 608 ntBASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 RPL31P60-201ENST00000478450 367 ntBASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 RPS27P23-201ENST00000487608 251 ntBASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 RNU6-27P-201ENST00000516146 107 ntBASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 SNORA31.18-201ENST00000517043 134 ntBASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 HSPE1P4-201ENST00000550617 308 ntBASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 MIR3616-201ENST00000584070 92 ntBASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 AP006248.3-201ENST00000623580 594 ntBASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 AC091812.1-201ENST00000432235 1948 ntBASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 AC009812.4-201ENST00000569134 1805 ntBASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 RNA5SP457-201ENST00000363657 124 ntBASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 U3.29-201ENST00000391296 212 ntBASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 AP002784.2-201ENST00000397300 549 ntBASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 SNORD23.1-201ENST00000408212 104 ntBASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 BEND7P1-201ENST00000422058 457 ntBASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 MTCO3P46-201ENST00000425787 232 ntBASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 RPP40P1-201ENST00000426762 456 ntBASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 AC007560.1-201ENST00000426912 237 ntBASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 AL135752.1-201ENST00000479477 471 ntBASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 AC020699.1-201ENST00000505161 445 ntBASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 AL138955.1-201ENST00000622881 1040 ntBASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
PHRF1Q9P1Y6 MTCO1P18-201ENST00000455518 1419 ntBASIC1.32□□□□□ -2.2
PHRF1Q9P1Y6 RNU6-252P-201ENST00000363232 107 ntBASIC1.32□□□□□ -2.2
PHRF1Q9P1Y6 RNU6-198P-201ENST00000384258 104 ntBASIC1.32□□□□□ -2.2
PHRF1Q9P1Y6 CISD1P1-201ENST00000393907 327 ntBASIC1.32□□□□□ -2.2
PHRF1Q9P1Y6 AL590623.1-201ENST00000427864 105 ntBASIC1.32□□□□□ -2.2
PHRF1Q9P1Y6 AC012497.1-201ENST00000429392 575 ntBASIC1.32□□□□□ -2.2
PHRF1Q9P1Y6 NEFMP1-201ENST00000443423 1006 ntBASIC1.32□□□□□ -2.2
PHRF1Q9P1Y6 BX248409.1-201ENST00000455497 255 ntBASIC1.32□□□□□ -2.2
PHRF1Q9P1Y6 MTCO3P2-201ENST00000457365 171 ntBASIC1.32□□□□□ -2.2
PHRF1Q9P1Y6 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.32□□□□□ -2.2
PHRF1Q9P1Y6 PABPC1P3-201ENST00000469174 459 ntBASIC1.32□□□□□ -2.2
PHRF1Q9P1Y6 RPS27P26-201ENST00000494583 239 ntBASIC1.32□□□□□ -2.2
PHRF1Q9P1Y6 ZNF705CP-201ENST00000530515 889 ntBASIC1.32□□□□□ -2.2
PHRF1Q9P1Y6 LSM6P2-201ENST00000552208 177 ntBASIC1.32□□□□□ -2.2
PHRF1Q9P1Y6 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.32□□□□□ -2.2
PHRF1Q9P1Y6 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
PHRF1Q9P1Y6 AC023824.2-201ENST00000566185 400 ntBASIC1.32□□□□□ -2.2
PHRF1Q9P1Y6 AC022662.1-201ENST00000580252 331 ntBASIC1.32□□□□□ -2.2
PHRF1Q9P1Y6 MIR3117-201ENST00000584034 78 ntBASIC1.32□□□□□ -2.2
PHRF1Q9P1Y6 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.32□□□□□ -2.2
PHRF1Q9P1Y6 AC005498.1-201ENST00000592125 465 ntBASIC1.32□□□□□ -2.2
PHRF1Q9P1Y6 AL031274.2-201ENST00000599419 203 ntBASIC1.32□□□□□ -2.2
PHRF1Q9P1Y6 AC012669.1-201ENST00000603209 283 ntBASIC1.32□□□□□ -2.2
PHRF1Q9P1Y6 AC025588.3-201ENST00000604182 274 ntBASIC1.32□□□□□ -2.2
PHRF1Q9P1Y6 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.32□□□□□ -2.2
PHRF1Q9P1Y6 AC004908.2-201ENST00000609090 574 ntBASIC1.32□□□□□ -2.2
PHRF1Q9P1Y6 AP005137.2-201ENST00000609238 400 ntBASIC1.32□□□□□ -2.2
PHRF1Q9P1Y6 HMGB1P24-202ENST00000615653 685 ntBASIC1.32□□□□□ -2.2
PHRF1Q9P1Y6 AC090617.9-201ENST00000623751 147 ntBASIC1.32□□□□□ -2.2
PHRF1Q9P1Y6 AC010889.1-201ENST00000566193 2666 ntBASIC1.31□□□□□ -2.2
PHRF1Q9P1Y6 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
PHRF1Q9P1Y6 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
PHRF1Q9P1Y6 RNU6-444P-201ENST00000383988 108 ntBASIC1.31□□□□□ -2.2
PHRF1Q9P1Y6 RNU6-40P-201ENST00000384254 107 ntBASIC1.31□□□□□ -2.2
PHRF1Q9P1Y6 AL121978.1-201ENST00000402778 359 ntBASIC1.31□□□□□ -2.2
PHRF1Q9P1Y6 AC008850.1-201ENST00000427546 362 ntBASIC1.31□□□□□ -2.2
PHRF1Q9P1Y6 RPL7L1P10-201ENST00000427790 463 ntBASIC1.31□□□□□ -2.2
PHRF1Q9P1Y6 EZH2P1-201ENST00000431167 291 ntBASIC1.31□□□□□ -2.2
PHRF1Q9P1Y6 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.31□□□□□ -2.2
PHRF1Q9P1Y6 RPS15AP27-201ENST00000449183 343 ntBASIC1.31□□□□□ -2.2
PHRF1Q9P1Y6 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC1.31□□□□□ -2.2
PHRF1Q9P1Y6 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.31□□□□□ -2.2
PHRF1Q9P1Y6 OR5AK1P-201ENST00000524837 922 ntBASIC1.31□□□□□ -2.2
PHRF1Q9P1Y6 AP004247.1-201ENST00000531556 1289 ntBASIC1.31□□□□□ -2.2
PHRF1Q9P1Y6 CBX3P8-201ENST00000532412 525 ntBASIC1.31□□□□□ -2.2
PHRF1Q9P1Y6 CBX3P7-201ENST00000532876 502 ntBASIC1.31□□□□□ -2.2
PHRF1Q9P1Y6 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.31□□□□□ -2.2
PHRF1Q9P1Y6 MIR3609-201ENST00000582661 80 ntBASIC1.31□□□□□ -2.2
PHRF1Q9P1Y6 AC012443.1-201ENST00000605605 231 ntBASIC1.31□□□□□ -2.2
PHRF1Q9P1Y6 AL050343.2-201ENST00000607338 280 ntBASIC1.31□□□□□ -2.2
PHRF1Q9P1Y6 RNU2-47P-201ENST00000410649 186 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms