Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
MKS1Q9NXB0 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
MKS1Q9NXB0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
MKS1Q9NXB0 SNORD3E-201ENST00000362899 217 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 RNU6-1252P-201ENST00000363054 104 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 RNA5SP447-201ENST00000363749 119 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 RNU6-398P-201ENST00000384143 109 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 RNU6-1013P-201ENST00000384180 107 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 MT-TD-201ENST00000387419 68 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
MKS1Q9NXB0 RNU2-3P-201ENST00000410144 191 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 AC011933.1-201ENST00000413334 321 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 CYCSP33-201ENST00000414485 327 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.88□□□□□ -1.79
MKS1Q9NXB0 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.88□□□□□ -1.79
MKS1Q9NXB0 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.88□□□□□ -1.79
MKS1Q9NXB0 BRK1P2-201ENST00000442875 223 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.88□□□□□ -1.79
MKS1Q9NXB0 AC117503.1-201ENST00000472241 394 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.88□□□□□ -1.79
MKS1Q9NXB0 RN7SL860P-201ENST00000473738 223 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 TRBV12-2-201ENST00000489763 344 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.88□□□□□ -1.79
MKS1Q9NXB0 AC103851.1-201ENST00000506833 274 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 AC006445.2-201ENST00000510061 472 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 MTND3P22-201ENST00000510932 243 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.88□□□□□ -1.79
MKS1Q9NXB0 RNU1-86P-201ENST00000516108 154 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 RNU1-107P-201ENST00000516617 154 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 SNORA25.17-201ENST00000517184 124 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 RNU6-1231P-201ENST00000517185 103 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.88□□□□□ -1.79
MKS1Q9NXB0 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
MKS1Q9NXB0 AL163153.1-201ENST00000554223 283 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 HMGB1P14-201ENST00000557424 591 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 AC005668.1-201ENST00000571142 476 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.88□□□□□ -1.79
MKS1Q9NXB0 MIR3942-201ENST00000585264 109 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 MIR5692C1-201ENST00000585309 91 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 C8orf59P2-201ENST00000603441 271 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 AL137849.1-201ENST00000604767 169 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 BRDTP1-201ENST00000605735 677 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 AC002044.1-201ENST00000606707 158 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 MIR6868-201ENST00000611215 58 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 MIR6820-201ENST00000611508 62 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 AC002076.2-201ENST00000617362 122 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 MIR6076-201ENST00000617521 113 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.88□□□□□ -1.79
MKS1Q9NXB0 TPTEP1-208ENST00000636884 213 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.88□□□□□ -1.79
MKS1Q9NXB0 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.88□□□□□ -1.79
MKS1Q9NXB0 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.88□□□□□ -1.79
MKS1Q9NXB0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
MKS1Q9NXB0 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
MKS1Q9NXB0 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.87□□□□□ -1.79
MKS1Q9NXB0 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
MKS1Q9NXB0 RNU6-266P-201ENST00000364225 107 ntBASIC3.87□□□□□ -1.79
MKS1Q9NXB0 RNA5SP505-201ENST00000364748 108 ntBASIC3.87□□□□□ -1.79
MKS1Q9NXB0 Y_RNA.301-201ENST00000364990 103 ntBASIC3.87□□□□□ -1.79
MKS1Q9NXB0 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
MKS1Q9NXB0 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
MKS1Q9NXB0 RNU6-1035P-201ENST00000384477 107 ntBASIC3.87□□□□□ -1.79
MKS1Q9NXB0 SNORA40C-201ENST00000391285 128 ntBASIC3.87□□□□□ -1.79
MKS1Q9NXB0 MIR450B-201ENST00000401182 78 ntBASIC3.87□□□□□ -1.79
MKS1Q9NXB0 AL122016.1-201ENST00000403365 367 ntBASIC3.87□□□□□ -1.79
MKS1Q9NXB0 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.87□□□□□ -1.79
MKS1Q9NXB0 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.87□□□□□ -1.79
MKS1Q9NXB0 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.87□□□□□ -1.79
MKS1Q9NXB0 SNRPEP4-201ENST00000435815 279 ntBASIC3.87□□□□□ -1.79
MKS1Q9NXB0 AL590664.1-201ENST00000448065 339 ntBASIC3.87□□□□□ -1.79
MKS1Q9NXB0 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.87□□□□□ -1.79
MKS1Q9NXB0 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.87□□□□□ -1.79
MKS1Q9NXB0 RN7SKP83-201ENST00000516512 178 ntBASIC3.87□□□□□ -1.79
MKS1Q9NXB0 RNU6-928P-201ENST00000516876 104 ntBASIC3.87□□□□□ -1.79
MKS1Q9NXB0 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.87□□□□□ -1.79
MKS1Q9NXB0 AP000889.2-201ENST00000532684 490 ntBASIC3.87□□□□□ -1.79
MKS1Q9NXB0 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
MKS1Q9NXB0 AC011602.1-201ENST00000546484 331 ntBASIC3.87□□□□□ -1.79
MKS1Q9NXB0 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.87□□□□□ -1.79
MKS1Q9NXB0 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.87□□□□□ -1.79
MKS1Q9NXB0 RMST_4.1-201ENST00000616886 107 ntBASIC3.87□□□□□ -1.79
MKS1Q9NXB0 MIR8059-201ENST00000620427 81 ntBASIC3.87□□□□□ -1.79
MKS1Q9NXB0 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.87□□□□□ -1.79
MKS1Q9NXB0 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
MKS1Q9NXB0 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
MKS1Q9NXB0 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
MKS1Q9NXB0 LARP1BP1-201ENST00000506036 1359 ntBASIC3.87□□□□□ -1.79
MKS1Q9NXB0 AF117829.1-206ENST00000621883 3802 ntBASIC3.87□□□□□ -1.79
MKS1Q9NXB0 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.86□□□□□ -1.79
MKS1Q9NXB0 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.86□□□□□ -1.79
MKS1Q9NXB0 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
MKS1Q9NXB0 RNU6-270P-201ENST00000364131 105 ntBASIC3.86□□□□□ -1.79
MKS1Q9NXB0 Y_RNA.356-201ENST00000365475 113 ntBASIC3.86□□□□□ -1.79
MKS1Q9NXB0 AL592148.1-201ENST00000413568 445 ntBASIC3.86□□□□□ -1.79
MKS1Q9NXB0 AC245028.1-201ENST00000423259 256 ntBASIC3.86□□□□□ -1.79
MKS1Q9NXB0 AC002075.2-201ENST00000425207 252 ntBASIC3.86□□□□□ -1.79
MKS1Q9NXB0 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
MKS1Q9NXB0 MTND3P23-201ENST00000431980 347 ntBASIC3.86□□□□□ -1.79
MKS1Q9NXB0 HMGB1P18-201ENST00000438801 619 ntBASIC3.86□□□□□ -1.79
MKS1Q9NXB0 NDUFB1P2-201ENST00000449477 176 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms