Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 RNU6-470P-201ENST00000515954 104 ntBASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 RNU6-699P-201ENST00000517081 110 ntBASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 AP006587.4-201ENST00000526053 529 ntBASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 AP002404.1-201ENST00000532005 451 ntBASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 U6.105-201ENST00000637379 88 ntBASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 Z82217.1-201ENST00000625157 8149 ntBASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 HSPA8P4-201ENST00000511877 1920 ntBASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 RNU1-108P-201ENST00000362556 161 ntBASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 RNU6-335P-201ENST00000364563 113 ntBASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 Y_RNA.496-201ENST00000384444 101 ntBASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 MIR135A2-201ENST00000384854 100 ntBASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 RPS4XP7-201ENST00000406274 780 ntBASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 AC092809.3-201ENST00000415453 231 ntBASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 AP000907.1-201ENST00000428428 510 ntBASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 AL121871.1-201ENST00000443413 436 ntBASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 RPS11P1-201ENST00000451072 473 ntBASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 AC074250.1-201ENST00000511117 192 ntBASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 AC023442.1-201ENST00000531247 422 ntBASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 YPEL5P3-201ENST00000547227 352 ntBASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.48□□□□□ -1.69
PDLIM7Q9NR12 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 SNORA23-201ENST00000365128 182 ntBASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 SET-203ENST00000372688 801 ntTSL 2 BASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 RNU6-190P-201ENST00000384154 102 ntBASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 RNU6-1181P-201ENST00000384191 106 ntBASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 RNU6-306P-201ENST00000384617 107 ntBASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 RNU6-95P-201ENST00000384697 107 ntBASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 MIR634-201ENST00000385208 97 ntBASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 MT-TG-201ENST00000387429 68 ntBASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 RNA5SP239-201ENST00000410218 129 ntBASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 RN7SKP58-201ENST00000411010 305 ntBASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 Z92545.1-201ENST00000411782 234 ntBASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 AC008267.5-201ENST00000424928 265 ntBASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 NEFMP1-201ENST00000443423 1006 ntBASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 AL121603.1-201ENST00000553815 142 ntBASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 AC022968.1-201ENST00000567372 442 ntBASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 AC025627.2-201ENST00000576220 160 ntBASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 AC007619.2-201ENST00000605743 379 ntBASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 HMGN2P28-201ENST00000606102 262 ntBASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 MIR6130-201ENST00000619419 109 ntBASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.47□□□□□ -1.69
PDLIM7Q9NR12 Y_RNA.188-201ENST00000363952 111 ntBASIC4.46□□□□□ -1.7
PDLIM7Q9NR12 Y_RNA.455-201ENST00000384230 98 ntBASIC4.46□□□□□ -1.7
PDLIM7Q9NR12 RNU6-1222P-201ENST00000384615 107 ntBASIC4.46□□□□□ -1.7
PDLIM7Q9NR12 AC110754.1-201ENST00000399740 601 ntBASIC4.46□□□□□ -1.7
PDLIM7Q9NR12 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.46□□□□□ -1.7
PDLIM7Q9NR12 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.46□□□□□ -1.7
PDLIM7Q9NR12 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.46□□□□□ -1.7
PDLIM7Q9NR12 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.46□□□□□ -1.7
PDLIM7Q9NR12 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.46□□□□□ -1.7
PDLIM7Q9NR12 RNU6-120P-201ENST00000516077 103 ntBASIC4.46□□□□□ -1.7
PDLIM7Q9NR12 AP004371.1-201ENST00000525240 214 ntBASIC4.46□□□□□ -1.7
PDLIM7Q9NR12 AC026371.1-201ENST00000551867 419 ntBASIC4.46□□□□□ -1.7
PDLIM7Q9NR12 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.46□□□□□ -1.7
PDLIM7Q9NR12 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms