Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 VPS26BP1-201ENST00000417155 755 ntBASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 Z80107.1-201ENST00000436830 412 ntBASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 PGBD4P3-201ENST00000440731 581 ntBASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 ELOCP30-201ENST00000447108 299 ntBASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 MTATP6P7-201ENST00000453315 681 ntBASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 RPS20P22-201ENST00000473700 357 ntBASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 AC055855.1-201ENST00000489563 579 ntBASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 AC106872.3-201ENST00000495104 446 ntBASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 AC020699.1-201ENST00000505161 445 ntBASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 LTV1P1-201ENST00000510683 1237 ntBASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 RNA5SP216-201ENST00000516111 123 ntBASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 SNORA31.6-201ENST00000516241 130 ntBASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 RNA5SP291-201ENST00000517222 105 ntBASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 MTCYBP20-201ENST00000524239 1129 ntBASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 AP004247.1-201ENST00000531556 1289 ntBASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 AL359212.1-201ENST00000556608 614 ntBASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 AC008121.1-201ENST00000603244 268 ntBASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 AC026790.2-201ENST00000606282 430 ntBASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 AC012640.5-201ENST00000623897 319 ntBASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 CTSLP2-204ENST00000629029 392 ntBASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 AC097655.1-201ENST00000635075 318 ntBASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 MTND4P35-201ENST00000604257 1375 ntBASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.96□□□□□ -2.1
EXOSC4Q9NPD3 AC010329.5-201ENST00000623497 2174 ntBASIC1.95□□□□□ -2.1
EXOSC4Q9NPD3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
EXOSC4Q9NPD3 OR56A5-201ENST00000340110 738 ntBASIC1.95□□□□□ -2.1
EXOSC4Q9NPD3 RNU6-931P-201ENST00000363850 107 ntBASIC1.95□□□□□ -2.1
EXOSC4Q9NPD3 RNU6-1200P-201ENST00000384162 107 ntBASIC1.95□□□□□ -2.1
EXOSC4Q9NPD3 SNORA67.4-201ENST00000384688 142 ntBASIC1.95□□□□□ -2.1
EXOSC4Q9NPD3 RSL24D1P4-201ENST00000400938 484 ntBASIC1.95□□□□□ -2.1
EXOSC4Q9NPD3 MIR1305-201ENST00000408300 86 ntBASIC1.95□□□□□ -2.1
EXOSC4Q9NPD3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.95□□□□□ -2.1
EXOSC4Q9NPD3 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.95□□□□□ -2.1
EXOSC4Q9NPD3 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.95□□□□□ -2.1
EXOSC4Q9NPD3 RPL7P36-201ENST00000444633 681 ntBASIC1.95□□□□□ -2.1
EXOSC4Q9NPD3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.95□□□□□ -2.1
EXOSC4Q9NPD3 CECR9-201ENST00000453421 199 ntBASIC1.95□□□□□ -2.1
EXOSC4Q9NPD3 RPL26P9-201ENST00000457466 433 ntBASIC1.95□□□□□ -2.1
EXOSC4Q9NPD3 AC126389.1-201ENST00000477436 290 ntBASIC1.95□□□□□ -2.1
EXOSC4Q9NPD3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
EXOSC4Q9NPD3 AC023141.11-201ENST00000508864 202 ntBASIC1.95□□□□□ -2.1
EXOSC4Q9NPD3 RNU5A-4P-201ENST00000516588 111 ntBASIC1.95□□□□□ -2.1
EXOSC4Q9NPD3 BTF3P12-201ENST00000519620 469 ntBASIC1.95□□□□□ -2.1
EXOSC4Q9NPD3 MTND2P32-201ENST00000521584 1038 ntBASIC1.95□□□□□ -2.1
EXOSC4Q9NPD3 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.95□□□□□ -2.1
EXOSC4Q9NPD3 SNORD53-201ENST00000579969 78 ntBASIC1.95□□□□□ -2.1
EXOSC4Q9NPD3 AP000403.1-201ENST00000603349 851 ntBASIC1.95□□□□□ -2.1
EXOSC4Q9NPD3 AC013244.3-201ENST00000605614 388 ntBASIC1.95□□□□□ -2.1
EXOSC4Q9NPD3 AL355472.4-201ENST00000610233 626 ntBASIC1.95□□□□□ -2.1
EXOSC4Q9NPD3 MIR6840-201ENST00000611937 71 ntBASIC1.95□□□□□ -2.1
EXOSC4Q9NPD3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.95□□□□□ -2.1
EXOSC4Q9NPD3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
EXOSC4Q9NPD3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 AL136360.1-201ENST00000503377 1900 ntBASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 SNORA16B-201ENST00000364674 135 ntBASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 MIR888-201ENST00000401186 77 ntBASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 AC078974.1-201ENST00000411597 223 ntBASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 AC244035.1-201ENST00000430042 390 ntBASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 AC020550.1-201ENST00000447385 163 ntBASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 AL160314.1-201ENST00000490836 438 ntBASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 RN7SL636P-201ENST00000497504 294 ntBASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 MTND5P13-201ENST00000513046 1079 ntBASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 RNU6-415P-201ENST00000516252 97 ntBASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 RNU6-64P-201ENST00000517119 105 ntBASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 RNA5SP290-201ENST00000517133 127 ntBASIC1.94□□□□□ -2.1
EXOSC4Q9NPD3 AC025755.1-201ENST00000521306 278 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms