Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.97□□□□□ -1.93
SIX2Q9NPC8 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.97□□□□□ -1.93
SIX2Q9NPC8 AC022364.2-201ENST00000457963 554 ntBASIC2.97□□□□□ -1.93
SIX2Q9NPC8 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.97□□□□□ -1.93
SIX2Q9NPC8 AC108860.1-201ENST00000484521 383 ntBASIC2.97□□□□□ -1.93
SIX2Q9NPC8 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.97□□□□□ -1.93
SIX2Q9NPC8 Y_RNA.704-201ENST00000516851 102 ntBASIC2.97□□□□□ -1.93
SIX2Q9NPC8 RNU6-1092P-201ENST00000516955 87 ntBASIC2.97□□□□□ -1.93
SIX2Q9NPC8 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.97□□□□□ -1.93
SIX2Q9NPC8 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SIX2Q9NPC8 AL157687.1-201ENST00000554853 619 ntBASIC2.97□□□□□ -1.93
SIX2Q9NPC8 AL512360.1-201ENST00000555346 234 ntBASIC2.97□□□□□ -1.93
SIX2Q9NPC8 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.97□□□□□ -1.93
SIX2Q9NPC8 AC092325.1-201ENST00000566449 554 ntBASIC2.97□□□□□ -1.93
SIX2Q9NPC8 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.97□□□□□ -1.93
SIX2Q9NPC8 MIR4506-201ENST00000584693 77 ntBASIC2.97□□□□□ -1.93
SIX2Q9NPC8 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.97□□□□□ -1.93
SIX2Q9NPC8 AL121992.2-201ENST00000606262 256 ntBASIC2.97□□□□□ -1.93
SIX2Q9NPC8 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.97□□□□□ -1.93
SIX2Q9NPC8 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.97□□□□□ -1.93
SIX2Q9NPC8 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.97□□□□□ -1.93
SIX2Q9NPC8 C2orf27A-204ENST00000623058 969 ntBASIC2.97□□□□□ -1.93
SIX2Q9NPC8 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SIX2Q9NPC8 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SIX2Q9NPC8 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SIX2Q9NPC8 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
SIX2Q9NPC8 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SIX2Q9NPC8 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.97□□□□□ -1.93
SIX2Q9NPC8 ZNF680P1-201ENST00000436625 1469 ntBASIC2.96□□□□□ -1.93
SIX2Q9NPC8 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
SIX2Q9NPC8 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.96□□□□□ -1.94
SIX2Q9NPC8 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.96□□□□□ -1.94
SIX2Q9NPC8 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
SIX2Q9NPC8 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SIX2Q9NPC8 SNORA31-201ENST00000362607 130 ntBASIC2.96□□□□□ -1.94
SIX2Q9NPC8 RNY4P14-201ENST00000363656 96 ntBASIC2.96□□□□□ -1.94
SIX2Q9NPC8 RNU1-112P-201ENST00000364401 164 ntBASIC2.96□□□□□ -1.94
SIX2Q9NPC8 RNA5SP189-201ENST00000364920 115 ntBASIC2.96□□□□□ -1.94
SIX2Q9NPC8 RNU6-1283P-201ENST00000365314 105 ntBASIC2.96□□□□□ -1.94
SIX2Q9NPC8 SNORD6-201ENST00000365444 73 ntBASIC2.96□□□□□ -1.94
SIX2Q9NPC8 Y_RNA.402-201ENST00000383972 102 ntBASIC2.96□□□□□ -1.94
SIX2Q9NPC8 RNU2-9P-201ENST00000410194 145 ntBASIC2.96□□□□□ -1.94
SIX2Q9NPC8 RNA5SP344-201ENST00000411081 104 ntBASIC2.96□□□□□ -1.94
SIX2Q9NPC8 AL139415.2-201ENST00000431968 163 ntBASIC2.96□□□□□ -1.94
SIX2Q9NPC8 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.96□□□□□ -1.94
SIX2Q9NPC8 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.96□□□□□ -1.94
SIX2Q9NPC8 AC000111.3-201ENST00000433478 193 ntBASIC2.96□□□□□ -1.94
SIX2Q9NPC8 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.96□□□□□ -1.94
SIX2Q9NPC8 RBMX2P4-201ENST00000441256 376 ntBASIC2.96□□□□□ -1.94
SIX2Q9NPC8 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.96□□□□□ -1.94
SIX2Q9NPC8 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC2.96□□□□□ -1.94
SIX2Q9NPC8 RPL23AP31-201ENST00000456160 467 ntBASIC2.96□□□□□ -1.94
SIX2Q9NPC8 AC027673.1-201ENST00000456245 405 ntBASIC2.96□□□□□ -1.94
SIX2Q9NPC8 MTCO3P38-201ENST00000468910 766 ntBASIC2.96□□□□□ -1.94
SIX2Q9NPC8 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
SIX2Q9NPC8 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.96□□□□□ -1.94
SIX2Q9NPC8 AC117522.3-201ENST00000507974 584 ntBASIC2.96□□□□□ -1.94
SIX2Q9NPC8 RNA5SP385-201ENST00000515947 110 ntBASIC2.96□□□□□ -1.94
SIX2Q9NPC8 SNORD27.1-201ENST00000516319 72 ntBASIC2.96□□□□□ -1.94
SIX2Q9NPC8 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.96□□□□□ -1.94
SIX2Q9NPC8 OR4R1P-201ENST00000529879 463 ntBASIC2.96□□□□□ -1.94
SIX2Q9NPC8 AC104383.1-201ENST00000530297 370 ntBASIC2.96□□□□□ -1.94
SIX2Q9NPC8 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.96□□□□□ -1.94
SIX2Q9NPC8 AC093012.1-202ENST00000549403 582 ntBASIC2.96□□□□□ -1.94
SIX2Q9NPC8 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.96□□□□□ -1.94
SIX2Q9NPC8 MED28P6-201ENST00000558776 231 ntBASIC2.96□□□□□ -1.94
SIX2Q9NPC8 HMGB1P6-201ENST00000569046 646 ntBASIC2.96□□□□□ -1.94
SIX2Q9NPC8 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.96□□□□□ -1.94
SIX2Q9NPC8 SNORA59B-202ENST00000578183 701 ntBASIC2.96□□□□□ -1.94
SIX2Q9NPC8 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.96□□□□□ -1.94
SIX2Q9NPC8 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.96□□□□□ -1.94
SIX2Q9NPC8 AP001330.4-201ENST00000604350 154 ntBASIC2.96□□□□□ -1.94
SIX2Q9NPC8 AP001596.2-201ENST00000608410 312 ntBASIC2.96□□□□□ -1.94
SIX2Q9NPC8 AL355810.1-201ENST00000614629 552 ntBASIC2.96□□□□□ -1.94
SIX2Q9NPC8 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.96□□□□□ -1.94
SIX2Q9NPC8 FRG1KP-201ENST00000623592 341 ntBASIC2.96□□□□□ -1.94
SIX2Q9NPC8 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.96□□□□□ -1.94
SIX2Q9NPC8 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
SIX2Q9NPC8 AC108206.1-201ENST00000570186 4159 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 RNU6-600P-201ENST00000362524 99 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 RNU6-960P-201ENST00000364056 120 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 RNU6-1090P-201ENST00000364065 94 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 RNU6-1322P-201ENST00000364309 107 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 SNORA51.2-201ENST00000364595 132 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 RNU1-140P-201ENST00000365040 165 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 SNORA70.4-201ENST00000365509 134 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 DYNLT3P1-201ENST00000378574 347 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 Y_RNA.481-201ENST00000384373 102 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SIX2Q9NPC8 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.95□□□□□ -1.94
SIX2Q9NPC8 RPL21P66-201ENST00000426566 466 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.95□□□□□ -1.94
SIX2Q9NPC8 ELOCP14-201ENST00000428070 331 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.95□□□□□ -1.94
SIX2Q9NPC8 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.95□□□□□ -1.94
SIX2Q9NPC8 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.95□□□□□ -1.94
SIX2Q9NPC8 AL596276.1-201ENST00000434465 418 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 MTATP6P16-201ENST00000434543 526 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 HMGB3P12-201ENST00000438745 556 ntBASIC2.95□□□□□ -1.94
SIX2Q9NPC8 ELOCP7-201ENST00000439968 331 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms