Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RPL30P10-201ENST00000488148 337 ntBASIC4.48□□□□□ -1.69
SSU72Q9NP77 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.48□□□□□ -1.69
SSU72Q9NP77 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.48□□□□□ -1.69
SSU72Q9NP77 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.48□□□□□ -1.69
SSU72Q9NP77 AC067942.3-201ENST00000512025 362 ntBASIC4.48□□□□□ -1.69
SSU72Q9NP77 MIR4310-201ENST00000582950 57 ntBASIC4.48□□□□□ -1.69
SSU72Q9NP77 AC006116.3-201ENST00000592968 361 ntBASIC4.48□□□□□ -1.69
SSU72Q9NP77 AC009318.2-201ENST00000610917 651 ntBASIC4.48□□□□□ -1.69
SSU72Q9NP77 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SSU72Q9NP77 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSU72Q9NP77 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
SSU72Q9NP77 AL592182.3-201ENST00000642132 3304 ntBASIC4.48□□□□□ -1.69
SSU72Q9NP77 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SSU72Q9NP77 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSU72Q9NP77 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.48□□□□□ -1.69
SSU72Q9NP77 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.48□□□□□ -1.69
SSU72Q9NP77 SAMMSON-226ENST00000642089 1582 ntBASIC4.48□□□□□ -1.69
SSU72Q9NP77 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SSU72Q9NP77 AL450326.2-201ENST00000421913 1962 ntBASIC4.47□□□□□ -1.69
SSU72Q9NP77 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSU72Q9NP77 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSU72Q9NP77 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSU72Q9NP77 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSU72Q9NP77 AL049555.1-201ENST00000562834 1933 ntBASIC4.47□□□□□ -1.69
SSU72Q9NP77 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.47□□□□□ -1.69
SSU72Q9NP77 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSU72Q9NP77 RNY1-201ENST00000364228 113 ntBASIC4.47□□□□□ -1.69
SSU72Q9NP77 MIR628-201ENST00000385229 95 ntBASIC4.47□□□□□ -1.69
SSU72Q9NP77 RNU6-700P-201ENST00000391043 107 ntBASIC4.47□□□□□ -1.69
SSU72Q9NP77 MIR548H3-201ENST00000408771 118 ntBASIC4.47□□□□□ -1.69
SSU72Q9NP77 AP000275.1-201ENST00000411943 390 ntBASIC4.47□□□□□ -1.69
SSU72Q9NP77 AC112498.1-201ENST00000444401 332 ntBASIC4.47□□□□□ -1.69
SSU72Q9NP77 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.47□□□□□ -1.69
SSU72Q9NP77 RPS18P6-201ENST00000476880 458 ntBASIC4.47□□□□□ -1.69
SSU72Q9NP77 Y_RNA.700-201ENST00000516806 100 ntBASIC4.47□□□□□ -1.69
SSU72Q9NP77 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.47□□□□□ -1.69
SSU72Q9NP77 AL110118.1-201ENST00000553543 400 ntBASIC4.47□□□□□ -1.69
SSU72Q9NP77 AL137100.2-201ENST00000555786 315 ntBASIC4.47□□□□□ -1.69
SSU72Q9NP77 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.47□□□□□ -1.69
SSU72Q9NP77 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.47□□□□□ -1.69
SSU72Q9NP77 AC136932.1-201ENST00000574771 208 ntBASIC4.47□□□□□ -1.69
SSU72Q9NP77 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.47□□□□□ -1.69
SSU72Q9NP77 AC107294.1-201ENST00000609524 467 ntBASIC4.47□□□□□ -1.69
SSU72Q9NP77 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.47□□□□□ -1.69
SSU72Q9NP77 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.47□□□□□ -1.69
SSU72Q9NP77 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.47□□□□□ -1.69
SSU72Q9NP77 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.47□□□□□ -1.69
SSU72Q9NP77 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.47□□□□□ -1.69
SSU72Q9NP77 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSU72Q9NP77 OR4G2P-202ENST00000641004 1759 ntBASIC4.47□□□□□ -1.69
SSU72Q9NP77 Z75746.1-201ENST00000440243 2080 ntBASIC4.47□□□□□ -1.69
SSU72Q9NP77 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.47□□□□□ -1.69
SSU72Q9NP77 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSU72Q9NP77 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSU72Q9NP77 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
SSU72Q9NP77 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SSU72Q9NP77 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
SSU72Q9NP77 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SSU72Q9NP77 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSU72Q9NP77 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SSU72Q9NP77 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SSU72Q9NP77 Y_RNA.27-201ENST00000362540 103 ntBASIC4.46□□□□□ -1.7
SSU72Q9NP77 Y_RNA.150-201ENST00000363562 102 ntBASIC4.46□□□□□ -1.7
SSU72Q9NP77 SNORD14B-201ENST00000364533 90 ntBASIC4.46□□□□□ -1.7
SSU72Q9NP77 MIR514A1-201ENST00000385133 98 ntBASIC4.46□□□□□ -1.7
SSU72Q9NP77 SNORD115-46-201ENST00000390982 71 ntBASIC4.46□□□□□ -1.7
SSU72Q9NP77 RNA5SP39-201ENST00000411245 120 ntBASIC4.46□□□□□ -1.7
SSU72Q9NP77 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.46□□□□□ -1.7
SSU72Q9NP77 RPL23AP22-201ENST00000437556 453 ntBASIC4.46□□□□□ -1.7
SSU72Q9NP77 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.46□□□□□ -1.7
SSU72Q9NP77 FABP5P15-201ENST00000453566 214 ntBASIC4.46□□□□□ -1.7
SSU72Q9NP77 RPS29P27-201ENST00000463711 170 ntBASIC4.46□□□□□ -1.7
SSU72Q9NP77 AL049874.1-201ENST00000489560 388 ntBASIC4.46□□□□□ -1.7
SSU72Q9NP77 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.46□□□□□ -1.7
SSU72Q9NP77 RNU6-143P-201ENST00000516942 93 ntBASIC4.46□□□□□ -1.7
SSU72Q9NP77 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.46□□□□□ -1.7
SSU72Q9NP77 AC103996.1-201ENST00000555468 102 ntBASIC4.46□□□□□ -1.7
SSU72Q9NP77 AP000787.2-201ENST00000604432 568 ntBASIC4.46□□□□□ -1.7
SSU72Q9NP77 AC006077.1-201ENST00000604746 343 ntBASIC4.46□□□□□ -1.7
SSU72Q9NP77 AL160290.3-201ENST00000604869 165 ntBASIC4.46□□□□□ -1.7
SSU72Q9NP77 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.46□□□□□ -1.7
SSU72Q9NP77 MIR6861-201ENST00000618657 64 ntBASIC4.46□□□□□ -1.7
SSU72Q9NP77 U3.53-201ENST00000628922 216 ntBASIC4.46□□□□□ -1.7
SSU72Q9NP77 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSU72Q9NP77 AC116096.1-201ENST00000566804 2314 ntBASIC4.46□□□□□ -1.7
SSU72Q9NP77 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSU72Q9NP77 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.46□□□□□ -1.7
SSU72Q9NP77 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.46□□□□□ -1.7
SSU72Q9NP77 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSU72Q9NP77 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
SSU72Q9NP77 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSU72Q9NP77 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
SSU72Q9NP77 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SSU72Q9NP77 SDAD1P2-201ENST00000441308 2028 ntBASIC4.45□□□□□ -1.7
SSU72Q9NP77 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SSU72Q9NP77 NCAPGP1-201ENST00000505112 1814 ntBASIC4.45□□□□□ -1.7
SSU72Q9NP77 MIR323A-201ENST00000362199 86 ntBASIC4.45□□□□□ -1.7
SSU72Q9NP77 AL603910.2-201ENST00000407268 136 ntBASIC4.45□□□□□ -1.7
SSU72Q9NP77 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.45□□□□□ -1.7
SSU72Q9NP77 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms