Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 PTGES3P4-201ENST00000426243 356 ntBASIC2.33□□□□□ -2.04
LRRC40Q9H9A6 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.33□□□□□ -2.04
LRRC40Q9H9A6 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.33□□□□□ -2.04
LRRC40Q9H9A6 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.33□□□□□ -2.04
LRRC40Q9H9A6 OR6C5P-201ENST00000452388 923 ntBASIC2.33□□□□□ -2.04
LRRC40Q9H9A6 AP001486.1-201ENST00000463339 476 ntBASIC2.33□□□□□ -2.04
LRRC40Q9H9A6 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LRRC40Q9H9A6 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.33□□□□□ -2.04
LRRC40Q9H9A6 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
LRRC40Q9H9A6 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.33□□□□□ -2.04
LRRC40Q9H9A6 AC118465.1-201ENST00000513820 1271 ntBASIC2.33□□□□□ -2.04
LRRC40Q9H9A6 SNORA31.3-201ENST00000516029 96 ntBASIC2.33□□□□□ -2.04
LRRC40Q9H9A6 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.33□□□□□ -2.04
LRRC40Q9H9A6 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.33□□□□□ -2.04
LRRC40Q9H9A6 DEFB108A-201ENST00000530110 222 ntBASIC2.33□□□□□ -2.04
LRRC40Q9H9A6 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
LRRC40Q9H9A6 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.33□□□□□ -2.04
LRRC40Q9H9A6 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.33□□□□□ -2.04
LRRC40Q9H9A6 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.33□□□□□ -2.04
LRRC40Q9H9A6 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.33□□□□□ -2.04
LRRC40Q9H9A6 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.33□□□□□ -2.04
LRRC40Q9H9A6 AL592221.1-201ENST00000605266 382 ntBASIC2.33□□□□□ -2.04
LRRC40Q9H9A6 AC026790.2-201ENST00000606282 430 ntBASIC2.33□□□□□ -2.04
LRRC40Q9H9A6 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
LRRC40Q9H9A6 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 AL109809.4-201ENST00000603520 2185 ntBASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 AC005336.3-201ENST00000623833 2679 ntBASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 MIRLET7G-201ENST00000362280 84 ntBASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 RNU6-486P-201ENST00000363116 107 ntBASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 RNU6-1284P-201ENST00000363701 100 ntBASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 AF274854.1-201ENST00000413236 615 ntBASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 AC003685.2-201ENST00000422795 395 ntBASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 RPS3AP44-201ENST00000425466 790 ntBASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 PTENP1-201ENST00000447117 1215 ntBASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 AP001324.2-201ENST00000461163 319 ntBASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 AC134050.1-201ENST00000495088 933 ntBASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 RNA5SP112-201ENST00000515937 99 ntBASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 AP001646.1-201ENST00000527936 915 ntBASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 AP000889.2-201ENST00000532684 490 ntBASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 AL133241.1-201ENST00000556832 487 ntBASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 ROCK1P1-201ENST00000573767 549 ntBASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 MIR5694-201ENST00000581190 76 ntBASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 NRBF2P1-201ENST00000587407 859 ntBASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 BNIP3P23-201ENST00000599655 511 ntBASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 AL158042.1-201ENST00000605338 460 ntBASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 AL157392.4-201ENST00000609756 345 ntBASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 AC097478.2-201ENST00000610572 514 ntBASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 AC025034.2-201ENST00000623264 286 ntBASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.32□□□□□ -2.04
LRRC40Q9H9A6 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LRRC40Q9H9A6 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LRRC40Q9H9A6 MIR122-201ENST00000385044 85 ntBASIC2.31□□□□□ -2.04
LRRC40Q9H9A6 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
LRRC40Q9H9A6 AL591416.1-201ENST00000404015 867 ntBASIC2.31□□□□□ -2.04
LRRC40Q9H9A6 NDUFS5P1-201ENST00000405668 289 ntBASIC2.31□□□□□ -2.04
LRRC40Q9H9A6 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.31□□□□□ -2.04
LRRC40Q9H9A6 USP9YP6-201ENST00000413550 854 ntBASIC2.31□□□□□ -2.04
LRRC40Q9H9A6 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.31□□□□□ -2.04
LRRC40Q9H9A6 VPS26BP1-201ENST00000417155 755 ntBASIC2.31□□□□□ -2.04
LRRC40Q9H9A6 ZNF90P2-204ENST00000419323 1075 ntBASIC2.31□□□□□ -2.04
LRRC40Q9H9A6 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.31□□□□□ -2.04
LRRC40Q9H9A6 AL049873.1-201ENST00000480540 376 ntBASIC2.31□□□□□ -2.04
LRRC40Q9H9A6 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
LRRC40Q9H9A6 RNU6-581P-201ENST00000516214 105 ntBASIC2.31□□□□□ -2.04
LRRC40Q9H9A6 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.31□□□□□ -2.04
LRRC40Q9H9A6 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.31□□□□□ -2.04
LRRC40Q9H9A6 MIR4509-3-201ENST00000578671 94 ntBASIC2.31□□□□□ -2.04
LRRC40Q9H9A6 MIR544B-201ENST00000582372 78 ntBASIC2.31□□□□□ -2.04
LRRC40Q9H9A6 MIR4509-2-201ENST00000583920 94 ntBASIC2.31□□□□□ -2.04
LRRC40Q9H9A6 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
LRRC40Q9H9A6 MIR4509-1-201ENST00000618224 94 ntBASIC2.31□□□□□ -2.04
LRRC40Q9H9A6 AL109620.1-201ENST00000618738 1197 ntBASIC2.31□□□□□ -2.04
LRRC40Q9H9A6 U6.99-201ENST00000637524 83 ntBASIC2.31□□□□□ -2.04
LRRC40Q9H9A6 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LRRC40Q9H9A6 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LRRC40Q9H9A6 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 OR5H15-201ENST00000383696 930 ntBASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 SNORD23.1-201ENST00000408212 104 ntBASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 PIGPP2-201ENST00000411569 458 ntBASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 AC107081.1-201ENST00000414975 361 ntBASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 NPM1P11-201ENST00000417106 855 ntBASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.3□□□□□ -2.04
LRRC40Q9H9A6 UBE2D3P1-201ENST00000436669 444 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms