Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 U3.12-201ENST00000364498 214 ntBASIC1.51□□□□□ -2.17
VCX3BQ9H321 MIR320A-201ENST00000385302 82 ntBASIC1.51□□□□□ -2.17
VCX3BQ9H321 USP9YP6-201ENST00000413550 854 ntBASIC1.51□□□□□ -2.17
VCX3BQ9H321 BTF3P8-201ENST00000414577 526 ntBASIC1.51□□□□□ -2.17
VCX3BQ9H321 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.51□□□□□ -2.17
VCX3BQ9H321 AL449283.1-202ENST00000418249 604 ntBASIC1.51□□□□□ -2.17
VCX3BQ9H321 MTCO2P5-201ENST00000422621 426 ntBASIC1.51□□□□□ -2.17
VCX3BQ9H321 EIF4EP2-201ENST00000422816 654 ntBASIC1.51□□□□□ -2.17
VCX3BQ9H321 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.51□□□□□ -2.17
VCX3BQ9H321 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.51□□□□□ -2.17
VCX3BQ9H321 ZYG11AP1-201ENST00000430329 837 ntBASIC1.51□□□□□ -2.17
VCX3BQ9H321 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.51□□□□□ -2.17
VCX3BQ9H321 RSU1P2-202ENST00000437884 485 ntBASIC1.51□□□□□ -2.17
VCX3BQ9H321 AC025750.2-201ENST00000442609 450 ntBASIC1.51□□□□□ -2.17
VCX3BQ9H321 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.51□□□□□ -2.17
VCX3BQ9H321 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC1.51□□□□□ -2.17
VCX3BQ9H321 CYP2C59P-201ENST00000457790 269 ntBASIC1.51□□□□□ -2.17
VCX3BQ9H321 TRBV1-201ENST00000476502 284 ntBASIC1.51□□□□□ -2.17
VCX3BQ9H321 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.51□□□□□ -2.17
VCX3BQ9H321 AC114981.1-201ENST00000503897 678 ntBASIC1.51□□□□□ -2.17
VCX3BQ9H321 AC098862.1-201ENST00000504991 413 ntBASIC1.51□□□□□ -2.17
VCX3BQ9H321 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.51□□□□□ -2.17
VCX3BQ9H321 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
VCX3BQ9H321 RANP3-201ENST00000530970 276 ntBASIC1.51□□□□□ -2.17
VCX3BQ9H321 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.51□□□□□ -2.17
VCX3BQ9H321 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.51□□□□□ -2.17
VCX3BQ9H321 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC1.51□□□□□ -2.17
VCX3BQ9H321 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.51□□□□□ -2.17
VCX3BQ9H321 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.51□□□□□ -2.17
VCX3BQ9H321 AC243773.3-201ENST00000613270 256 ntBASIC1.51□□□□□ -2.17
VCX3BQ9H321 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
VCX3BQ9H321 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
VCX3BQ9H321 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
VCX3BQ9H321 RNU6-343P-201ENST00000364709 104 ntBASIC1.5□□□□□ -2.17
VCX3BQ9H321 SNORA67.3-201ENST00000384366 140 ntBASIC1.5□□□□□ -2.17
VCX3BQ9H321 BTF3L4P2-201ENST00000392798 346 ntBASIC1.5□□□□□ -2.17
VCX3BQ9H321 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.5□□□□□ -2.17
VCX3BQ9H321 AC007919.1-201ENST00000429380 217 ntBASIC1.5□□□□□ -2.17
VCX3BQ9H321 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.5□□□□□ -2.17
VCX3BQ9H321 MTND2P20-201ENST00000440805 661 ntBASIC1.5□□□□□ -2.17
VCX3BQ9H321 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.5□□□□□ -2.17
VCX3BQ9H321 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.5□□□□□ -2.17
VCX3BQ9H321 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.5□□□□□ -2.17
VCX3BQ9H321 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.5□□□□□ -2.17
VCX3BQ9H321 AC126389.1-201ENST00000477436 290 ntBASIC1.5□□□□□ -2.17
VCX3BQ9H321 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.5□□□□□ -2.17
VCX3BQ9H321 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.5□□□□□ -2.17
VCX3BQ9H321 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.5□□□□□ -2.17
VCX3BQ9H321 SLC2A13P1-201ENST00000531560 322 ntBASIC1.5□□□□□ -2.17
VCX3BQ9H321 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.5□□□□□ -2.17
VCX3BQ9H321 CYB5AP5-201ENST00000549779 389 ntBASIC1.5□□□□□ -2.17
VCX3BQ9H321 HIGD1AP17-201ENST00000554576 276 ntBASIC1.5□□□□□ -2.17
VCX3BQ9H321 AC008269.2-201ENST00000561915 1105 ntBASIC1.5□□□□□ -2.17
VCX3BQ9H321 AC026271.5-201ENST00000577873 130 ntBASIC1.5□□□□□ -2.17
VCX3BQ9H321 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.5□□□□□ -2.17
VCX3BQ9H321 AL512506.1-201ENST00000613918 449 ntBASIC1.5□□□□□ -2.17
VCX3BQ9H321 AC013476.2-201ENST00000614456 459 ntBASIC1.5□□□□□ -2.17
VCX3BQ9H321 MIR3199-2-201ENST00000636243 86 ntBASIC1.5□□□□□ -2.17
VCX3BQ9H321 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
VCX3BQ9H321 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
VCX3BQ9H321 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.5□□□□□ -2.17
VCX3BQ9H321 AC092881.1-201ENST00000638218 2733 ntBASIC1.5□□□□□ -2.17
VCX3BQ9H321 CDR1-202ENST00000625883 1485 ntBASIC1.5□□□□□ -2.17
VCX3BQ9H321 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
VCX3BQ9H321 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
VCX3BQ9H321 GNG5P1-201ENST00000255500 204 ntBASIC1.49□□□□□ -2.17
VCX3BQ9H321 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.49□□□□□ -2.17
VCX3BQ9H321 RNU1-39P-201ENST00000383897 165 ntBASIC1.49□□□□□ -2.17
VCX3BQ9H321 MIR150-201ENST00000385048 84 ntBASIC1.49□□□□□ -2.17
VCX3BQ9H321 MIR30A-201ENST00000385092 71 ntBASIC1.49□□□□□ -2.17
VCX3BQ9H321 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
VCX3BQ9H321 RPL23AP29-201ENST00000397284 453 ntBASIC1.49□□□□□ -2.17
VCX3BQ9H321 AL031679.1-201ENST00000400616 525 ntBASIC1.49□□□□□ -2.17
VCX3BQ9H321 RNA5SP425-201ENST00000410336 112 ntBASIC1.49□□□□□ -2.17
VCX3BQ9H321 AL135786.1-201ENST00000415892 214 ntBASIC1.49□□□□□ -2.17
VCX3BQ9H321 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.49□□□□□ -2.17
VCX3BQ9H321 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.49□□□□□ -2.17
VCX3BQ9H321 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.49□□□□□ -2.17
VCX3BQ9H321 SNORD121B-201ENST00000458838 81 ntBASIC1.49□□□□□ -2.17
VCX3BQ9H321 snoU13.8-201ENST00000458890 104 ntBASIC1.49□□□□□ -2.17
VCX3BQ9H321 MTCYBP16-201ENST00000509187 1129 ntBASIC1.49□□□□□ -2.17
VCX3BQ9H321 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.49□□□□□ -2.17
VCX3BQ9H321 NRON-201ENST00000517270 370 ntBASIC1.49□□□□□ -2.17
VCX3BQ9H321 RNU6-840P-201ENST00000517275 65 ntBASIC1.49□□□□□ -2.17
VCX3BQ9H321 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.49□□□□□ -2.17
VCX3BQ9H321 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
VCX3BQ9H321 IMMP1LP2-201ENST00000552954 492 ntBASIC1.49□□□□□ -2.17
VCX3BQ9H321 DUXAP1-201ENST00000556632 463 ntBASIC1.49□□□□□ -2.17
VCX3BQ9H321 MIR5708-201ENST00000579723 85 ntBASIC1.49□□□□□ -2.17
VCX3BQ9H321 MIR4444-1-201ENST00000581696 74 ntBASIC1.49□□□□□ -2.17
VCX3BQ9H321 MIR4444-2-201ENST00000584390 74 ntBASIC1.49□□□□□ -2.17
VCX3BQ9H321 AL390838.2-201ENST00000602394 274 ntBASIC1.49□□□□□ -2.17
VCX3BQ9H321 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.49□□□□□ -2.17
VCX3BQ9H321 AC104763.2-201ENST00000604179 382 ntBASIC1.49□□□□□ -2.17
VCX3BQ9H321 AL445435.1-201ENST00000604232 665 ntBASIC1.49□□□□□ -2.17
VCX3BQ9H321 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.49□□□□□ -2.17
VCX3BQ9H321 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.49□□□□□ -2.17
VCX3BQ9H321 MTND1P37-201ENST00000636562 264 ntBASIC1.49□□□□□ -2.17
VCX3BQ9H321 ZNF876P-202ENST00000398732 1485 ntBASIC1.49□□□□□ -2.17
VCX3BQ9H321 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms