Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 RNU6-328P-201ENST00000390887 106 ntBASIC4.14□□□□□ -1.75
VPS11Q9H270 RNU6-278P-201ENST00000390945 109 ntBASIC4.14□□□□□ -1.75
VPS11Q9H270 SNORA75.6-201ENST00000391318 127 ntBASIC4.14□□□□□ -1.75
VPS11Q9H270 NDUFS5P1-201ENST00000405668 289 ntBASIC4.14□□□□□ -1.75
VPS11Q9H270 RPL37P18-201ENST00000411602 243 ntBASIC4.14□□□□□ -1.75
VPS11Q9H270 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VPS11Q9H270 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.14□□□□□ -1.75
VPS11Q9H270 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.14□□□□□ -1.75
VPS11Q9H270 AC087650.1-201ENST00000431445 468 ntBASIC4.14□□□□□ -1.75
VPS11Q9H270 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS11Q9H270 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS11Q9H270 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS11Q9H270 AL162389.1-201ENST00000449233 177 ntBASIC4.14□□□□□ -1.75
VPS11Q9H270 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.14□□□□□ -1.75
VPS11Q9H270 RPL21P93-201ENST00000480465 489 ntBASIC4.14□□□□□ -1.75
VPS11Q9H270 AC108860.1-201ENST00000484521 383 ntBASIC4.14□□□□□ -1.75
VPS11Q9H270 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS11Q9H270 AC116655.1-201ENST00000508324 901 ntBASIC4.14□□□□□ -1.75
VPS11Q9H270 RNA5SP468-201ENST00000516782 93 ntBASIC4.14□□□□□ -1.75
VPS11Q9H270 SNORA31.22-201ENST00000517204 135 ntBASIC4.14□□□□□ -1.75
VPS11Q9H270 RN7SKP289-201ENST00000517244 295 ntBASIC4.14□□□□□ -1.75
VPS11Q9H270 ERHP1-201ENST00000523006 310 ntBASIC4.14□□□□□ -1.75
VPS11Q9H270 MTND4P7-201ENST00000523876 130 ntBASIC4.14□□□□□ -1.75
VPS11Q9H270 RPL21P12-201ENST00000559810 515 ntBASIC4.14□□□□□ -1.75
VPS11Q9H270 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS11Q9H270 AC023043.4-201ENST00000612081 449 ntBASIC4.14□□□□□ -1.75
VPS11Q9H270 TUG1_2.1-201ENST00000614234 87 ntBASIC4.14□□□□□ -1.75
VPS11Q9H270 AC011155.2-201ENST00000623202 216 ntBASIC4.14□□□□□ -1.75
VPS11Q9H270 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS11Q9H270 AC091812.1-201ENST00000432235 1948 ntBASIC4.14□□□□□ -1.75
VPS11Q9H270 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
VPS11Q9H270 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS11Q9H270 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS11Q9H270 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS11Q9H270 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS11Q9H270 GABPAP-201ENST00000419271 1356 ntBASIC4.14□□□□□ -1.75
VPS11Q9H270 AL353746.1-201ENST00000566293 6881 ntBASIC4.14□□□□□ -1.75
VPS11Q9H270 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS11Q9H270 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS11Q9H270 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS11Q9H270 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS11Q9H270 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS11Q9H270 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS11Q9H270 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS11Q9H270 LINC02471-203ENST00000641941 4752 ntBASIC4.13□□□□□ -1.75
VPS11Q9H270 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS11Q9H270 Y_RNA.60-201ENST00000362831 98 ntBASIC4.13□□□□□ -1.75
VPS11Q9H270 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS11Q9H270 RNU6-33P-201ENST00000384793 107 ntBASIC4.13□□□□□ -1.75
VPS11Q9H270 MIR129-1-201ENST00000384972 72 ntBASIC4.13□□□□□ -1.75
VPS11Q9H270 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
VPS11Q9H270 RNU6-823P-201ENST00000391042 103 ntBASIC4.13□□□□□ -1.75
VPS11Q9H270 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS11Q9H270 RPS16P5-201ENST00000406501 404 ntBASIC4.13□□□□□ -1.75
VPS11Q9H270 MED13P1-201ENST00000428342 171 ntBASIC4.13□□□□□ -1.75
VPS11Q9H270 RPL23AP1-201ENST00000428990 471 ntBASIC4.13□□□□□ -1.75
VPS11Q9H270 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.13□□□□□ -1.75
VPS11Q9H270 ANP32BP2-201ENST00000454525 545 ntBASIC4.13□□□□□ -1.75
VPS11Q9H270 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS11Q9H270 SNRPFP3-201ENST00000457792 225 ntBASIC4.13□□□□□ -1.75
VPS11Q9H270 AC008571.1-201ENST00000467232 300 ntBASIC4.13□□□□□ -1.75
VPS11Q9H270 AC103987.1-201ENST00000473394 348 ntBASIC4.13□□□□□ -1.75
VPS11Q9H270 RPS4XP13-201ENST00000483219 789 ntBASIC4.13□□□□□ -1.75
VPS11Q9H270 GZMAP1-201ENST00000503054 631 ntBASIC4.13□□□□□ -1.75
VPS11Q9H270 AC116562.3-201ENST00000506136 177 ntBASIC4.13□□□□□ -1.75
VPS11Q9H270 AL592156.1-201ENST00000508758 304 ntBASIC4.13□□□□□ -1.75
VPS11Q9H270 AC008526.1-201ENST00000509149 338 ntBASIC4.13□□□□□ -1.75
VPS11Q9H270 HIGD1AP13-201ENST00000509878 289 ntBASIC4.13□□□□□ -1.75
VPS11Q9H270 Y_RNA.670-201ENST00000516255 105 ntBASIC4.13□□□□□ -1.75
VPS11Q9H270 RNA5SP503-201ENST00000517047 117 ntBASIC4.13□□□□□ -1.75
VPS11Q9H270 RN7SKP92-201ENST00000517266 244 ntBASIC4.13□□□□□ -1.75
VPS11Q9H270 AC068587.5-201ENST00000528506 175 ntBASIC4.13□□□□□ -1.75
VPS11Q9H270 MIR4700-201ENST00000578311 74 ntBASIC4.13□□□□□ -1.75
VPS11Q9H270 AC092747.3-201ENST00000603769 301 ntBASIC4.13□□□□□ -1.75
VPS11Q9H270 AC110741.2-201ENST00000605278 268 ntBASIC4.13□□□□□ -1.75
VPS11Q9H270 AC004805.2-201ENST00000605382 482 ntBASIC4.13□□□□□ -1.75
VPS11Q9H270 AC098479.1-201ENST00000609225 154 ntBASIC4.13□□□□□ -1.75
VPS11Q9H270 AL138726.1-201ENST00000614873 333 ntBASIC4.13□□□□□ -1.75
VPS11Q9H270 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.13□□□□□ -1.75
VPS11Q9H270 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS11Q9H270 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS11Q9H270 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VPS11Q9H270 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS11Q9H270 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS11Q9H270 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS11Q9H270 MAPK10-373ENST00000641983 6772 ntBASIC4.12□□□□□ -1.75
VPS11Q9H270 AC079741.1-201ENST00000321498 212 ntBASIC4.12□□□□□ -1.75
VPS11Q9H270 SNORD3E-201ENST00000362899 217 ntBASIC4.12□□□□□ -1.75
VPS11Q9H270 Y_RNA.106-201ENST00000363189 100 ntBASIC4.12□□□□□ -1.75
VPS11Q9H270 Y_RNA.350-201ENST00000365409 98 ntBASIC4.12□□□□□ -1.75
VPS11Q9H270 MT-TW-201ENST00000387382 68 ntBASIC4.12□□□□□ -1.75
VPS11Q9H270 RNA5SP129-201ENST00000410276 118 ntBASIC4.12□□□□□ -1.75
VPS11Q9H270 RNU4-25P-201ENST00000410569 230 ntBASIC4.12□□□□□ -1.75
VPS11Q9H270 POLHP1-201ENST00000411806 470 ntBASIC4.12□□□□□ -1.75
VPS11Q9H270 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS11Q9H270 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.12□□□□□ -1.75
VPS11Q9H270 RPL23AP46-201ENST00000438548 490 ntBASIC4.12□□□□□ -1.75
VPS11Q9H270 AC093156.1-201ENST00000440382 670 ntBASIC4.12□□□□□ -1.75
VPS11Q9H270 HMGN2P7-201ENST00000456186 273 ntBASIC4.12□□□□□ -1.75
VPS11Q9H270 RPL36AP13-201ENST00000457490 317 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms