Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 GLUD1P4-201ENST00000590914 418 ntBASIC3.75□□□□□ -1.81
VPS16Q9H269 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.75□□□□□ -1.81
VPS16Q9H269 AL354950.2-201ENST00000617939 290 ntBASIC3.75□□□□□ -1.81
VPS16Q9H269 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS16Q9H269 TPTEP1-208ENST00000636884 213 ntBASIC3.75□□□□□ -1.81
VPS16Q9H269 AC007496.3-201ENST00000624987 3443 ntBASIC3.75□□□□□ -1.81
VPS16Q9H269 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS16Q9H269 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS16Q9H269 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
VPS16Q9H269 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VPS16Q9H269 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VPS16Q9H269 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
VPS16Q9H269 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VPS16Q9H269 MFSD8-233ENST00000641482 4860 ntBASIC3.74□□□□□ -1.81
VPS16Q9H269 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VPS16Q9H269 AC073343.1-201ENST00000328239 651 ntBASIC3.74□□□□□ -1.81
VPS16Q9H269 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VPS16Q9H269 Y_RNA.132-201ENST00000363421 102 ntBASIC3.74□□□□□ -1.81
VPS16Q9H269 Y_RNA.184-201ENST00000363884 108 ntBASIC3.74□□□□□ -1.81
VPS16Q9H269 DEFB109C-201ENST00000382575 264 ntBASIC3.74□□□□□ -1.81
VPS16Q9H269 DEFB109B-201ENST00000382656 264 ntBASIC3.74□□□□□ -1.81
VPS16Q9H269 AL356967.1-201ENST00000406305 431 ntBASIC3.74□□□□□ -1.81
VPS16Q9H269 RNU2-36P-201ENST00000410361 191 ntBASIC3.74□□□□□ -1.81
VPS16Q9H269 RNA5SP31-201ENST00000411144 127 ntBASIC3.74□□□□□ -1.81
VPS16Q9H269 AC093578.1-201ENST00000415219 368 ntBASIC3.74□□□□□ -1.81
VPS16Q9H269 MED13P1-201ENST00000428342 171 ntBASIC3.74□□□□□ -1.81
VPS16Q9H269 SRIP2-201ENST00000428470 166 ntBASIC3.74□□□□□ -1.81
VPS16Q9H269 AC018644.1-201ENST00000429934 551 ntBASIC3.74□□□□□ -1.81
VPS16Q9H269 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS16Q9H269 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS16Q9H269 AC008264.1-201ENST00000447612 367 ntBASIC3.74□□□□□ -1.81
VPS16Q9H269 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS16Q9H269 HMGN1P18-201ENST00000457642 277 ntBASIC3.74□□□□□ -1.81
VPS16Q9H269 RN7SL432P-201ENST00000484057 298 ntBASIC3.74□□□□□ -1.81
VPS16Q9H269 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS16Q9H269 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS16Q9H269 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.74□□□□□ -1.81
VPS16Q9H269 SNORD60.2-201ENST00000516883 86 ntBASIC3.74□□□□□ -1.81
VPS16Q9H269 RNU6-410P-201ENST00000517006 107 ntBASIC3.74□□□□□ -1.81
VPS16Q9H269 AC022690.1-201ENST00000526681 550 ntBASIC3.74□□□□□ -1.81
VPS16Q9H269 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.74□□□□□ -1.81
VPS16Q9H269 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS16Q9H269 SCOCP1-201ENST00000554676 349 ntBASIC3.74□□□□□ -1.81
VPS16Q9H269 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS16Q9H269 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS16Q9H269 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS16Q9H269 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS16Q9H269 AC098848.2-201ENST00000588023 330 ntBASIC3.74□□□□□ -1.81
VPS16Q9H269 AP001029.3-201ENST00000588063 596 ntBASIC3.74□□□□□ -1.81
VPS16Q9H269 AC243960.4-201ENST00000600532 288 ntBASIC3.74□□□□□ -1.81
VPS16Q9H269 AL133255.1-201ENST00000606374 441 ntBASIC3.74□□□□□ -1.81
VPS16Q9H269 AL365204.3-201ENST00000612448 685 ntBASIC3.74□□□□□ -1.81
VPS16Q9H269 AL121772.2-201ENST00000614331 297 ntBASIC3.74□□□□□ -1.81
VPS16Q9H269 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS16Q9H269 RMST_7.1-201ENST00000621935 268 ntBASIC3.74□□□□□ -1.81
VPS16Q9H269 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS16Q9H269 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VPS16Q9H269 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS16Q9H269 AC010733.2-201ENST00000589496 5702 ntBASIC3.73□□□□□ -1.81
VPS16Q9H269 AL137003.2-201ENST00000606924 2538 ntBASIC3.73□□□□□ -1.81
VPS16Q9H269 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS16Q9H269 RNA5SP197-201ENST00000363357 119 ntBASIC3.73□□□□□ -1.81
VPS16Q9H269 RNU6-960P-201ENST00000364056 120 ntBASIC3.73□□□□□ -1.81
VPS16Q9H269 MIR558-201ENST00000384920 94 ntBASIC3.73□□□□□ -1.81
VPS16Q9H269 NDUFA5P4-201ENST00000436704 385 ntBASIC3.73□□□□□ -1.81
VPS16Q9H269 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS16Q9H269 MTND4P19-201ENST00000446659 478 ntBASIC3.73□□□□□ -1.81
VPS16Q9H269 GAPDHP27-201ENST00000447427 1020 ntBASIC3.73□□□□□ -1.81
VPS16Q9H269 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS16Q9H269 RNU7-63P-201ENST00000459054 62 ntBASIC3.73□□□□□ -1.81
VPS16Q9H269 RNU6-1092P-201ENST00000516955 87 ntBASIC3.73□□□□□ -1.81
VPS16Q9H269 BTF3P12-201ENST00000519620 469 ntBASIC3.73□□□□□ -1.81
VPS16Q9H269 HMGB1P41-201ENST00000520234 440 ntBASIC3.73□□□□□ -1.81
VPS16Q9H269 AC093331.1-201ENST00000521474 169 ntBASIC3.73□□□□□ -1.81
VPS16Q9H269 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS16Q9H269 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS16Q9H269 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.73□□□□□ -1.81
VPS16Q9H269 AL020997.2-201ENST00000602607 184 ntBASIC3.73□□□□□ -1.81
VPS16Q9H269 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.73□□□□□ -1.81
VPS16Q9H269 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.73□□□□□ -1.81
VPS16Q9H269 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS16Q9H269 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS16Q9H269 NACAP2-201ENST00000318548 624 ntBASIC3.72□□□□□ -1.81
VPS16Q9H269 RNA5SP124-201ENST00000362739 110 ntBASIC3.72□□□□□ -1.81
VPS16Q9H269 Y_RNA.255-201ENST00000364581 97 ntBASIC3.72□□□□□ -1.81
VPS16Q9H269 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS16Q9H269 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
VPS16Q9H269 SNORA32.2-201ENST00000384049 122 ntBASIC3.72□□□□□ -1.81
VPS16Q9H269 Y_RNA.474-201ENST00000384341 102 ntBASIC3.72□□□□□ -1.81
VPS16Q9H269 RNU6-39P-201ENST00000384344 107 ntBASIC3.72□□□□□ -1.81
VPS16Q9H269 MIR514A1-201ENST00000385133 98 ntBASIC3.72□□□□□ -1.81
VPS16Q9H269 RPL21P17-201ENST00000397467 475 ntBASIC3.72□□□□□ -1.81
VPS16Q9H269 RN7SKP140-201ENST00000411196 284 ntBASIC3.72□□□□□ -1.81
VPS16Q9H269 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.72□□□□□ -1.81
VPS16Q9H269 MTCO2P12-201ENST00000427426 682 ntBASIC3.72□□□□□ -1.81
VPS16Q9H269 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.72□□□□□ -1.81
VPS16Q9H269 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS16Q9H269 AL356010.1-201ENST00000456364 102 ntBASIC3.72□□□□□ -1.81
VPS16Q9H269 HMGN2P26-201ENST00000463169 339 ntBASIC3.72□□□□□ -1.81
VPS16Q9H269 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms