Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AC079382.1-201ENST00000493346 557 ntBASIC3.45□□□□□ -1.86
CDT1Q9H211 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.45□□□□□ -1.86
CDT1Q9H211 AC025465.4-201ENST00000513422 638 ntBASIC3.45□□□□□ -1.86
CDT1Q9H211 RNU6-390P-201ENST00000516259 103 ntBASIC3.45□□□□□ -1.86
CDT1Q9H211 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.45□□□□□ -1.86
CDT1Q9H211 AC100870.1-201ENST00000522035 505 ntBASIC3.45□□□□□ -1.86
CDT1Q9H211 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.45□□□□□ -1.86
CDT1Q9H211 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.45□□□□□ -1.86
CDT1Q9H211 AL512310.1-201ENST00000548639 172 ntBASIC3.45□□□□□ -1.86
CDT1Q9H211 UBL5P2-201ENST00000583788 219 ntBASIC3.45□□□□□ -1.86
CDT1Q9H211 UBE2V2P2-201ENST00000587677 504 ntBASIC3.45□□□□□ -1.86
CDT1Q9H211 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.45□□□□□ -1.86
CDT1Q9H211 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDT1Q9H211 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.45□□□□□ -1.86
CDT1Q9H211 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.45□□□□□ -1.86
CDT1Q9H211 AL355810.1-201ENST00000614629 552 ntBASIC3.45□□□□□ -1.86
CDT1Q9H211 FER-210ENST00000628534 558 ntTSL 5 BASIC3.45□□□□□ -1.86
CDT1Q9H211 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDT1Q9H211 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
CDT1Q9H211 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDT1Q9H211 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDT1Q9H211 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDT1Q9H211 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDT1Q9H211 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.44□□□□□ -1.86
CDT1Q9H211 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDT1Q9H211 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.44□□□□□ -1.86
CDT1Q9H211 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDT1Q9H211 HSPE1P11-201ENST00000339579 310 ntBASIC3.44□□□□□ -1.86
CDT1Q9H211 Y_RNA.22-201ENST00000362492 102 ntBASIC3.44□□□□□ -1.86
CDT1Q9H211 Y_RNA.86-201ENST00000363020 111 ntBASIC3.44□□□□□ -1.86
CDT1Q9H211 RNU6-1284P-201ENST00000363701 100 ntBASIC3.44□□□□□ -1.86
CDT1Q9H211 Y_RNA.279-201ENST00000364763 95 ntBASIC3.44□□□□□ -1.86
CDT1Q9H211 RNU5E-6P-201ENST00000365574 115 ntBASIC3.44□□□□□ -1.86
CDT1Q9H211 RNU6-74P-201ENST00000384235 107 ntBASIC3.44□□□□□ -1.86
CDT1Q9H211 MIR558-201ENST00000384920 94 ntBASIC3.44□□□□□ -1.86
CDT1Q9H211 AL591416.1-201ENST00000404015 867 ntBASIC3.44□□□□□ -1.86
CDT1Q9H211 AL359634.1-202ENST00000404721 284 ntBASIC3.44□□□□□ -1.86
CDT1Q9H211 OR9R1P-201ENST00000412200 877 ntBASIC3.44□□□□□ -1.86
CDT1Q9H211 ZNF90P2-204ENST00000419323 1075 ntBASIC3.44□□□□□ -1.86
CDT1Q9H211 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.44□□□□□ -1.86
CDT1Q9H211 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.44□□□□□ -1.86
CDT1Q9H211 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.44□□□□□ -1.86
CDT1Q9H211 OR2AS1P-201ENST00000427827 319 ntBASIC3.44□□□□□ -1.86
CDT1Q9H211 RPL23AP69-201ENST00000431134 458 ntBASIC3.44□□□□□ -1.86
CDT1Q9H211 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.44□□□□□ -1.86
CDT1Q9H211 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.44□□□□□ -1.86
CDT1Q9H211 HMGN1P18-201ENST00000457642 277 ntBASIC3.44□□□□□ -1.86
CDT1Q9H211 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.44□□□□□ -1.86
CDT1Q9H211 RNA5SP401-201ENST00000515920 127 ntBASIC3.44□□□□□ -1.86
CDT1Q9H211 RNU7-51P-201ENST00000516560 62 ntBASIC3.44□□□□□ -1.86
CDT1Q9H211 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.44□□□□□ -1.86
CDT1Q9H211 ERHP1-201ENST00000523006 310 ntBASIC3.44□□□□□ -1.86
CDT1Q9H211 OR5B19P-201ENST00000531766 928 ntBASIC3.44□□□□□ -1.86
CDT1Q9H211 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.44□□□□□ -1.86
CDT1Q9H211 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.44□□□□□ -1.86
CDT1Q9H211 MED28P6-201ENST00000558776 231 ntBASIC3.44□□□□□ -1.86
CDT1Q9H211 ANP32BP3-201ENST00000559213 706 ntBASIC3.44□□□□□ -1.86
CDT1Q9H211 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.44□□□□□ -1.86
CDT1Q9H211 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.44□□□□□ -1.86
CDT1Q9H211 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.44□□□□□ -1.86
CDT1Q9H211 AC005951.2-201ENST00000576282 495 ntBASIC3.44□□□□□ -1.86
CDT1Q9H211 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.44□□□□□ -1.86
CDT1Q9H211 AL121992.2-201ENST00000606262 256 ntBASIC3.44□□□□□ -1.86
CDT1Q9H211 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.44□□□□□ -1.86
CDT1Q9H211 YWHAEP7-203ENST00000622054 312 ntBASIC3.44□□□□□ -1.86
CDT1Q9H211 PLCE1P1-201ENST00000622094 305 ntBASIC3.44□□□□□ -1.86
CDT1Q9H211 AC091903.1-201ENST00000624322 454 ntBASIC3.44□□□□□ -1.86
CDT1Q9H211 AL359697.1-201ENST00000624879 587 ntBASIC3.44□□□□□ -1.86
CDT1Q9H211 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDT1Q9H211 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.44□□□□□ -1.86
CDT1Q9H211 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDT1Q9H211 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDT1Q9H211 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDT1Q9H211 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
CDT1Q9H211 ZNF680P1-201ENST00000436625 1469 ntBASIC3.43□□□□□ -1.86
CDT1Q9H211 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDT1Q9H211 RNU6-1097P-201ENST00000363586 107 ntBASIC3.43□□□□□ -1.86
CDT1Q9H211 RNY3P3-201ENST00000363816 102 ntBASIC3.43□□□□□ -1.86
CDT1Q9H211 SNORA69-201ENST00000383895 132 ntBASIC3.43□□□□□ -1.86
CDT1Q9H211 SNORA36C-201ENST00000384289 132 ntBASIC3.43□□□□□ -1.86
CDT1Q9H211 MIR591-201ENST00000385290 95 ntBASIC3.43□□□□□ -1.86
CDT1Q9H211 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CDT1Q9H211 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.43□□□□□ -1.86
CDT1Q9H211 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDT1Q9H211 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.43□□□□□ -1.86
CDT1Q9H211 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.43□□□□□ -1.86
CDT1Q9H211 AC093106.2-201ENST00000428212 385 ntBASIC3.43□□□□□ -1.86
CDT1Q9H211 AC098614.3-201ENST00000438957 440 ntBASIC3.43□□□□□ -1.86
CDT1Q9H211 BNIP3P2-201ENST00000441221 577 ntBASIC3.43□□□□□ -1.86
CDT1Q9H211 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.43□□□□□ -1.86
CDT1Q9H211 AC079781.2-201ENST00000446424 169 ntBASIC3.43□□□□□ -1.86
CDT1Q9H211 CACYBPP2-201ENST00000453625 678 ntBASIC3.43□□□□□ -1.86
CDT1Q9H211 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.43□□□□□ -1.86
CDT1Q9H211 MTND1P11-201ENST00000456661 876 ntBASIC3.43□□□□□ -1.86
CDT1Q9H211 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.43□□□□□ -1.86
CDT1Q9H211 RNU6-261P-201ENST00000459506 102 ntBASIC3.43□□□□□ -1.86
CDT1Q9H211 AL049830.2-201ENST00000480072 201 ntBASIC3.43□□□□□ -1.86
CDT1Q9H211 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.43□□□□□ -1.86
CDT1Q9H211 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.43□□□□□ -1.86
CDT1Q9H211 RNU6-410P-201ENST00000517006 107 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms