Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 AL109913.1-201ENST00000421173 514 ntBASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 MTND1P32-201ENST00000433043 938 ntBASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 AL161651.1-201ENST00000440882 223 ntBASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 AL118520.1-201ENST00000450770 291 ntBASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 AC080013.2-201ENST00000460866 323 ntBASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 RN7SL274P-201ENST00000492268 272 ntBASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 AP006587.4-201ENST00000526053 529 ntBASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 OR5AQ1P-201ENST00000527596 927 ntBASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 RPS3AP4-201ENST00000555161 764 ntBASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 LRRC37A5P-203ENST00000580181 585 ntBASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 AL021997.1-201ENST00000605757 193 ntBASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 AL139022.2-201ENST00000606934 443 ntBASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 AC009974.1-201ENST00000608881 455 ntBASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 AC010678.1-201ENST00000614118 713 ntBASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 MIR8057-201ENST00000620957 69 ntBASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 ADAM3A-203ENST00000461344 2157 ntBASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 KPNA2P1-201ENST00000458289 1591 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 MTND5P30-201ENST00000452896 1731 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 RNU6-658P-201ENST00000384606 106 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 RNU6-925P-201ENST00000384629 104 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 SNORA48.3-201ENST00000391081 134 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 AL030996.1-201ENST00000411430 235 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 HMGB1P27-201ENST00000431429 603 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 HSFY7P-201ENST00000432672 318 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 TIMM9P1-201ENST00000436122 256 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 UBE2FP3-201ENST00000436366 524 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 HSFY8P-201ENST00000437934 318 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 IPO7P1-201ENST00000442031 636 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 HSFY5P-201ENST00000453726 309 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 RPL7P49-201ENST00000471402 708 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 AC022493.1-201ENST00000492984 337 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 AC139453.3-201ENST00000493276 369 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 AC104685.1-201ENST00000502445 371 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 MTND4P33-201ENST00000556706 766 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 AC106782.4-201ENST00000568264 210 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 MTND1P8-201ENST00000571424 950 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 RPS3AP23-202ENST00000574601 686 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 MIR4444-1-201ENST00000581696 74 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 MIR4444-2-201ENST00000584390 74 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 SRGNP1-201ENST00000603392 451 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 AC091965.4-201ENST00000607691 587 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 AC046143.2-201ENST00000609789 160 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 uc_338.14-201ENST00000613162 166 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 AL139418.1-201ENST00000613613 177 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 AC009159.1-201ENST00000618386 642 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 AC013470.4-201ENST00000619978 986 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 AC104454.1-201ENST00000421341 1401 ntBASIC1.89□□□□□ -2.11
SLIRPQ9GZT3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
SLIRPQ9GZT3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.88□□□□□ -2.11
SLIRPQ9GZT3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SLIRPQ9GZT3 RNY4P24-201ENST00000362735 96 ntBASIC1.88□□□□□ -2.11
SLIRPQ9GZT3 SNORA38-201ENST00000363946 132 ntBASIC1.88□□□□□ -2.11
SLIRPQ9GZT3 SNORA67.4-201ENST00000384688 142 ntBASIC1.88□□□□□ -2.11
SLIRPQ9GZT3 MIR218-1-201ENST00000384999 110 ntBASIC1.88□□□□□ -2.11
SLIRPQ9GZT3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SLIRPQ9GZT3 U3.40-201ENST00000408706 208 ntBASIC1.88□□□□□ -2.11
SLIRPQ9GZT3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.88□□□□□ -2.11
SLIRPQ9GZT3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.88□□□□□ -2.11
SLIRPQ9GZT3 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.88□□□□□ -2.11
SLIRPQ9GZT3 AC236972.1-201ENST00000433225 199 ntBASIC1.88□□□□□ -2.11
SLIRPQ9GZT3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.88□□□□□ -2.11
SLIRPQ9GZT3 ANKRD26P4-201ENST00000455755 950 ntBASIC1.88□□□□□ -2.11
SLIRPQ9GZT3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.88□□□□□ -2.11
SLIRPQ9GZT3 DYNLL1P5-201ENST00000467158 270 ntBASIC1.88□□□□□ -2.11
SLIRPQ9GZT3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.88□□□□□ -2.11
SLIRPQ9GZT3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms