Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5□□□□□ -1.61
COL25A1Q9BXS0 RNU6-347P-201ENST00000516658 105 ntBASIC5□□□□□ -1.61
COL25A1Q9BXS0 AC103783.1-201ENST00000520506 373 ntBASIC5□□□□□ -1.61
COL25A1Q9BXS0 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5□□□□□ -1.61
COL25A1Q9BXS0 AC005000.2-201ENST00000605468 310 ntBASIC5□□□□□ -1.61
COL25A1Q9BXS0 RNU6-6P-201ENST00000606623 107 ntBASIC5□□□□□ -1.61
COL25A1Q9BXS0 AC099669.2-201ENST00000616549 437 ntBASIC5□□□□□ -1.61
COL25A1Q9BXS0 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5□□□□□ -1.61
COL25A1Q9BXS0 snoU18.1-201ENST00000629629 71 ntBASIC5□□□□□ -1.61
COL25A1Q9BXS0 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL25A1Q9BXS0 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5□□□□□ -1.61
COL25A1Q9BXS0 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL25A1Q9BXS0 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5□□□□□ -1.61
COL25A1Q9BXS0 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL25A1Q9BXS0 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5□□□□□ -1.61
COL25A1Q9BXS0 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 AP001284.1-201ENST00000528393 2118 ntBASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 RNU6-899P-201ENST00000363947 107 ntBASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 RNU6-275P-201ENST00000364910 107 ntBASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 MIR34B-201ENST00000385076 84 ntBASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 LAP3P1-201ENST00000403648 294 ntBASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 AL117339.3-201ENST00000418733 162 ntBASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 RNU6-1218P-201ENST00000458990 108 ntBASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 AC117440.1-201ENST00000474107 571 ntBASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 SNRPCP3-201ENST00000474888 476 ntBASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 RN7SL810P-201ENST00000493031 276 ntBASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 PARP4P3-201ENST00000510265 317 ntBASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 KLKP1-201ENST00000595979 403 ntBASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 AC006115.2-201ENST00000596823 202 ntBASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 AC112484.5-201ENST00000624189 228 ntBASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 AC008758.3-201ENST00000507003 1829 ntBASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 AC138907.8-201ENST00000623981 2256 ntBASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL25A1Q9BXS0 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 AC125336.1-201ENST00000508893 2827 ntBASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 AC010300.1-201ENST00000600671 5134 ntBASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 SNORD8-201ENST00000363915 110 ntBASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 Y_RNA.369-201ENST00000365568 117 ntBASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 SNORD12B-201ENST00000410433 91 ntBASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 RN7SKP284-201ENST00000411002 343 ntBASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 AC234781.4-201ENST00000419384 244 ntBASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 AC007568.1-201ENST00000422912 471 ntBASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 RPL30P3-201ENST00000424262 333 ntBASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 AL031736.2-201ENST00000426573 787 ntBASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 RPS15AP7-201ENST00000439294 405 ntBASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 AL133244.1-201ENST00000456007 258 ntBASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 AC022493.1-201ENST00000492984 337 ntBASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 RPS27AP13-201ENST00000498403 237 ntBASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 SNORA40.9-201ENST00000515895 93 ntBASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 RNA5SP392-201ENST00000516905 112 ntBASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 AC103996.1-201ENST00000555468 102 ntBASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 AC060766.3-201ENST00000591442 263 ntBASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 DNAJC19P2-201ENST00000593340 302 ntBASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 SNORD91B-202ENST00000608459 222 ntBASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 MIR6130-201ENST00000619419 109 ntBASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.98□□□□□ -1.61
COL25A1Q9BXS0 AC000374.1-201ENST00000434698 1745 ntBASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
COL25A1Q9BXS0 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms