Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.73□□□□□ -1.97
CCM2Q9BSQ5 AC138853.1-201ENST00000503549 823 ntBASIC2.73□□□□□ -1.97
CCM2Q9BSQ5 RNA5SP471-201ENST00000516971 106 ntBASIC2.73□□□□□ -1.97
CCM2Q9BSQ5 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.73□□□□□ -1.97
CCM2Q9BSQ5 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.73□□□□□ -1.97
CCM2Q9BSQ5 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.73□□□□□ -1.97
CCM2Q9BSQ5 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
CCM2Q9BSQ5 MTCO3P13-201ENST00000577757 781 ntBASIC2.73□□□□□ -1.97
CCM2Q9BSQ5 MIR3682-201ENST00000581338 84 ntBASIC2.73□□□□□ -1.97
CCM2Q9BSQ5 MIR3605-201ENST00000583214 100 ntBASIC2.73□□□□□ -1.97
CCM2Q9BSQ5 AC136601.2-201ENST00000604356 474 ntBASIC2.73□□□□□ -1.97
CCM2Q9BSQ5 AC007619.2-201ENST00000605743 379 ntBASIC2.73□□□□□ -1.97
CCM2Q9BSQ5 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
CCM2Q9BSQ5 AC107871.2-201ENST00000612894 502 ntBASIC2.73□□□□□ -1.97
CCM2Q9BSQ5 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.73□□□□□ -1.97
CCM2Q9BSQ5 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.73□□□□□ -1.97
CCM2Q9BSQ5 AC034102.8-201ENST00000615146 484 ntBASIC2.73□□□□□ -1.97
CCM2Q9BSQ5 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.73□□□□□ -1.97
CCM2Q9BSQ5 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.73□□□□□ -1.97
CCM2Q9BSQ5 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.73□□□□□ -1.97
CCM2Q9BSQ5 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCM2Q9BSQ5 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 AL161431.1-201ENST00000618966 4205 ntBASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 U8.3-201ENST00000363321 132 ntBASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 Y_RNA.201-201ENST00000364052 96 ntBASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 RNY1P12-201ENST00000364251 105 ntBASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 RNU6-512P-201ENST00000364438 103 ntBASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 RNU5E-6P-201ENST00000365574 115 ntBASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 RNU6-217P-201ENST00000384164 104 ntBASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 AL138827.1-201ENST00000402666 306 ntBASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 AL139095.1-201ENST00000404326 391 ntBASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 RNU2-25P-201ENST00000411041 191 ntBASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 RNU6-195P-201ENST00000411352 109 ntBASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 AL513477.1-202ENST00000417061 214 ntBASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 ARPC3P1-201ENST00000437218 533 ntBASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 AC105272.1-201ENST00000438604 198 ntBASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 MTATP6P26-201ENST00000445926 662 ntBASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 ST13P20-201ENST00000447996 1065 ntBASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 AC092798.1-201ENST00000458542 409 ntBASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 AC087588.1-201ENST00000462203 316 ntBASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 MTCO2P29-201ENST00000465212 189 ntBASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 SNORA9.3-201ENST00000516383 129 ntBASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 RNU7-51P-201ENST00000516560 62 ntBASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 AL356057.1-201ENST00000533798 831 ntBASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 AC006504.3-201ENST00000586818 523 ntBASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 AC073544.2-201ENST00000601155 540 ntBASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 AC098826.3-201ENST00000603823 466 ntBASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 AC091304.9-201ENST00000612091 226 ntBASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 AP001506.1-201ENST00000615444 211 ntBASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 AC026241.1-201ENST00000517873 2142 ntBASIC2.72□□□□□ -1.97
CCM2Q9BSQ5 OR5J1P-201ENST00000313544 939 ntBASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 RNU4-1-201ENST00000363925 141 ntBASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 RNU6-188P-201ENST00000364207 107 ntBASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 SNORA20.2-201ENST00000383922 131 ntBASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 MIR9-1-201ENST00000385198 89 ntBASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 AL139397.2-201ENST00000404529 772 ntBASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 ZNF90P2-204ENST00000419323 1075 ntBASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 AC104850.1-201ENST00000435940 476 ntBASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 MTND1P27-201ENST00000451117 902 ntBASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 CECR9-201ENST00000453421 199 ntBASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 RPL31P3-201ENST00000458430 332 ntBASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 RNU6-956P-201ENST00000458868 103 ntBASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 SNORD42A-201ENST00000459584 64 ntBASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 RNU6-1092P-201ENST00000516955 87 ntBASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 HMGB1P41-201ENST00000520234 440 ntBASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 AC040904.1-201ENST00000590850 223 ntBASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 AC119751.7-201ENST00000600494 245 ntBASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 AC007363.1-201ENST00000604736 620 ntBASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 AC004805.2-201ENST00000605382 482 ntBASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 AC005046.1-201ENST00000608515 625 ntBASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 AL161734.1-201ENST00000609720 557 ntBASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 FTX_3.1-201ENST00000610451 147 ntBASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 TEX21P-201ENST00000447107 1476 ntBASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms