Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.09□□□□□ -2.07
HDHD3Q9BSH5 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.09□□□□□ -2.07
HDHD3Q9BSH5 AL451007.1-201ENST00000595491 289 ntBASIC2.09□□□□□ -2.07
HDHD3Q9BSH5 AP001981.2-201ENST00000603241 418 ntBASIC2.09□□□□□ -2.07
HDHD3Q9BSH5 AL645944.1-201ENST00000603857 493 ntBASIC2.09□□□□□ -2.07
HDHD3Q9BSH5 Z94722.1-201ENST00000604328 474 ntBASIC2.09□□□□□ -2.07
HDHD3Q9BSH5 AC121247.2-201ENST00000604776 136 ntBASIC2.09□□□□□ -2.07
HDHD3Q9BSH5 AC121334.2-201ENST00000605387 271 ntBASIC2.09□□□□□ -2.07
HDHD3Q9BSH5 AC025594.3-201ENST00000613068 790 ntBASIC2.09□□□□□ -2.07
HDHD3Q9BSH5 AC006338.1-201ENST00000618453 749 ntBASIC2.09□□□□□ -2.07
HDHD3Q9BSH5 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.09□□□□□ -2.07
HDHD3Q9BSH5 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.09□□□□□ -2.07
HDHD3Q9BSH5 AC110079.1-202ENST00000635213 138 ntBASIC2.09□□□□□ -2.07
HDHD3Q9BSH5 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.09□□□□□ -2.08
HDHD3Q9BSH5 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 AC008669.1-201ENST00000565823 2178 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 AL137003.2-201ENST00000606924 2538 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 U8.3-201ENST00000363321 132 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 RNU6-960P-201ENST00000364056 120 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 SNORD46.1-201ENST00000364139 104 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 RNA5SP139-201ENST00000364340 117 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 SNORA9-201ENST00000384215 133 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 MIR888-201ENST00000401186 77 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 Y_RNA.598-201ENST00000410480 95 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 RNU2-52P-201ENST00000410680 190 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 RNU6-248P-201ENST00000410720 107 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 RNU2-62P-201ENST00000410868 191 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 AC023141.4-201ENST00000412031 328 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 BX682237.1-201ENST00000415016 335 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 AC009518.2-201ENST00000418056 731 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 AC009414.1-201ENST00000427200 443 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 AC093106.2-201ENST00000428212 385 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 MTATP6P17-201ENST00000431030 672 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 SNRPEP9-201ENST00000436794 238 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 RPL22P17-201ENST00000438729 315 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 USP9YP15-201ENST00000442391 422 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 SSXP1-201ENST00000453640 473 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 MTCO2P29-201ENST00000465212 189 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 RPS29P20-201ENST00000489592 171 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 AC010587.1-201ENST00000505809 469 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 AC008088.1-201ENST00000580993 280 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 HMGN2P15-201ENST00000585707 270 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 AF131215.7-201ENST00000602443 707 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 AL359999.1-201ENST00000604513 294 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 AL136363.1-201ENST00000605349 337 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 CR848007.1-201ENST00000442354 1699 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 AC073346.2-201ENST00000624724 2058 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 AL359693.1-201ENST00000614959 2407 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 AC099654.7-201ENST00000635788 2127 ntBASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
HDHD3Q9BSH5 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 ELF2P3-201ENST00000445099 1506 ntBASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 MIR21-201ENST00000362134 72 ntBASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 RNU6-859P-201ENST00000362728 107 ntBASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 RNU4-91P-201ENST00000364778 135 ntBASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 MIR128-1-201ENST00000384921 82 ntBASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 AL356057.2-201ENST00000403318 432 ntBASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 RAC1P6-201ENST00000423911 575 ntBASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 GTF2IP20-201ENST00000431663 360 ntBASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 AC009961.2-201ENST00000435771 251 ntBASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 AP000936.2-201ENST00000447151 681 ntBASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 CECR9-201ENST00000453421 199 ntBASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 SNORD109B-201ENST00000458961 67 ntBASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 RNA5SP269-201ENST00000459032 137 ntBASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 SNORD109A-201ENST00000459128 67 ntBASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 SNORD97-201ENST00000459187 142 ntBASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 SNORD42A-201ENST00000459584 64 ntBASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 MRPS17P3-201ENST00000465453 385 ntBASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 AC107626.1-201ENST00000471084 183 ntBASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 AC096725.1-201ENST00000514266 313 ntBASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 RNU6-1092P-201ENST00000516955 87 ntBASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.07□□□□□ -2.08
HDHD3Q9BSH5 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms