Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 CKAP2P1-201ENST00000555477 2049 ntBASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 AC092435.3-201ENST00000565538 3654 ntBASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 RNU1-75P-201ENST00000347264 129 ntBASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 RNA5SP72-201ENST00000364442 117 ntBASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 SNORD115-7-201ENST00000365306 82 ntBASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 RNU4-48P-201ENST00000365559 182 ntBASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 VN1R108P-201ENST00000431580 830 ntBASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 AC006512.1-201ENST00000468816 291 ntBASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 RN7SL293P-201ENST00000481765 281 ntBASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 EIF4EP3-201ENST00000498782 656 ntBASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 RNA5SP503-201ENST00000517047 117 ntBASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 RNU6-1183P-201ENST00000517054 60 ntBASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 AC093331.1-201ENST00000521474 169 ntBASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 AL451007.1-201ENST00000595491 289 ntBASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 AL138889.2-201ENST00000603883 242 ntBASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 AC069200.1-201ENST00000609511 323 ntBASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 Z99129.1-201ENST00000612510 255 ntBASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 U6.42-201ENST00000618440 107 ntBASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 U6.105-201ENST00000637379 88 ntBASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 AL392088.2-201ENST00000637607 285 ntBASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 MTCO1P12-201ENST00000414273 1543 ntBASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
HERPUD2Q9BSE4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 SNORD46.1-201ENST00000364139 104 ntBASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 MIR183-201ENST00000384958 110 ntBASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 RNU6-750P-201ENST00000390946 107 ntBASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 RNU2-9P-201ENST00000410194 145 ntBASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 RNU2-16P-201ENST00000410712 136 ntBASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 AC093578.1-201ENST00000415219 368 ntBASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 AC096649.2-201ENST00000416186 393 ntBASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 MTATP6P18-201ENST00000417994 673 ntBASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 RPL31P12-201ENST00000422587 358 ntBASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 USP9YP14-201ENST00000430663 563 ntBASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 AL078601.1-201ENST00000444542 271 ntBASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 CYCSP35-201ENST00000451978 304 ntBASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 PRSS3P4-201ENST00000453323 162 ntBASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 HMGN1P18-201ENST00000457642 277 ntBASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 AC091153.1-201ENST00000466297 402 ntBASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 RPL7P49-201ENST00000471402 708 ntBASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 RPL31P41-201ENST00000477967 372 ntBASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 SNORD27.1-201ENST00000516319 72 ntBASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 AC021739.1-201ENST00000559631 174 ntBASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 MIR548AC-201ENST00000585049 88 ntBASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 AC020895.1-201ENST00000595362 272 ntBASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 DEFB131E-202ENST00000602581 683 ntBASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 AC007938.3-201ENST00000604965 623 ntBASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 AC064807.4-201ENST00000607201 407 ntBASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 AC007684.1-201ENST00000609671 477 ntBASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 ZNF519P1-201ENST00000449011 1626 ntBASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.48□□□□□ -1.85
HERPUD2Q9BSE4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 RNU6-1120P-201ENST00000362988 108 ntBASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 RNA5SP50-201ENST00000363731 107 ntBASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 RNU6-116P-201ENST00000384042 109 ntBASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 AC006946.1-201ENST00000429106 328 ntBASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 AC002486.1-201ENST00000435098 391 ntBASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 AC009296.1-201ENST00000443146 155 ntBASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 MTCO2P7-201ENST00000446518 666 ntBASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 HMGN2P10-201ENST00000448085 265 ntBASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 AC091179.1-201ENST00000461606 579 ntBASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.47□□□□□ -1.85
HERPUD2Q9BSE4 TRBV1-201ENST00000476502 284 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms