Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.52□□□□□ -2.33
COL12A1Q99715 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.52□□□□□ -2.33
COL12A1Q99715 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC0.52□□□□□ -2.33
COL12A1Q99715 RNA5SP57-201ENST00000459463 123 ntBASIC0.52□□□□□ -2.33
COL12A1Q99715 AC005410.1-202ENST00000460347 485 ntBASIC0.52□□□□□ -2.33
COL12A1Q99715 RNU4-77P-201ENST00000516692 156 ntBASIC0.52□□□□□ -2.33
COL12A1Q99715 AC068620.3-201ENST00000602749 560 ntBASIC0.52□□□□□ -2.33
COL12A1Q99715 AC110491.1-201ENST00000562191 2010 ntBASIC0.52□□□□□ -2.33
COL12A1Q99715 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC0.52□□□□□ -2.33
COL12A1Q99715 AL356432.1-201ENST00000405809 419 ntBASIC0.52□□□□□ -2.33
COL12A1Q99715 RPL30P13-201ENST00000418873 348 ntBASIC0.52□□□□□ -2.33
COL12A1Q99715 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC0.52□□□□□ -2.33
COL12A1Q99715 AC093155.1-201ENST00000440164 826 ntBASIC0.52□□□□□ -2.33
COL12A1Q99715 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.52□□□□□ -2.33
COL12A1Q99715 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.52□□□□□ -2.33
COL12A1Q99715 AC023932.2-201ENST00000603176 175 ntBASIC0.52□□□□□ -2.33
COL12A1Q99715 RPL21P136-201ENST00000605378 396 ntBASIC0.52□□□□□ -2.33
COL12A1Q99715 AC107214.2-201ENST00000608204 634 ntBASIC0.52□□□□□ -2.33
COL12A1Q99715 RNU6-1126P-201ENST00000384002 107 ntBASIC0.51□□□□□ -2.33
COL12A1Q99715 SNORD26-201ENST00000384147 75 ntBASIC0.51□□□□□ -2.33
COL12A1Q99715 CCNB2P1-201ENST00000399411 1150 ntBASIC0.51□□□□□ -2.33
COL12A1Q99715 MTCO1P3-201ENST00000429327 192 ntBASIC0.51□□□□□ -2.33
COL12A1Q99715 AC073614.1-201ENST00000438690 650 ntBASIC0.51□□□□□ -2.33
COL12A1Q99715 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.51□□□□□ -2.33
COL12A1Q99715 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
COL12A1Q99715 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.51□□□□□ -2.33
COL12A1Q99715 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.51□□□□□ -2.33
COL12A1Q99715 uc_338.9-201ENST00000617424 182 ntBASIC0.51□□□□□ -2.33
COL12A1Q99715 KLF3P2-201ENST00000465138 268 ntBASIC0.51□□□□□ -2.33
COL12A1Q99715 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
COL12A1Q99715 OR5H4P-201ENST00000510851 923 ntBASIC0.51□□□□□ -2.33
COL12A1Q99715 AC005741.1-201ENST00000511094 432 ntBASIC0.51□□□□□ -2.33
COL12A1Q99715 LINC00557-201ENST00000563184 1279 ntBASIC0.51□□□□□ -2.33
COL12A1Q99715 SNRPGP17-201ENST00000603780 214 ntBASIC0.51□□□□□ -2.33
COL12A1Q99715 DUSP12P1-201ENST00000612874 516 ntBASIC0.51□□□□□ -2.33
COL12A1Q99715 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
COL12A1Q99715 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.51□□□□□ -2.33
COL12A1Q99715 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC0.51□□□□□ -2.33
COL12A1Q99715 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.51□□□□□ -2.33
COL12A1Q99715 HMGN2P16-201ENST00000456802 261 ntBASIC0.51□□□□□ -2.33
COL12A1Q99715 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.51□□□□□ -2.33
COL12A1Q99715 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC0.51□□□□□ -2.33
COL12A1Q99715 LINC00933-203ENST00000559812 219 ntBASIC0.51□□□□□ -2.33
COL12A1Q99715 AC145207.9-201ENST00000623802 325 ntBASIC0.51□□□□□ -2.33
COL12A1Q99715 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.51□□□□□ -2.33
COL12A1Q99715 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.5□□□□□ -2.33
COL12A1Q99715 Y_RNA.453-201ENST00000384223 109 ntBASIC0.5□□□□□ -2.33
COL12A1Q99715 SNX3P1X-201ENST00000414887 175 ntBASIC0.5□□□□□ -2.33
COL12A1Q99715 AC093716.1-201ENST00000435923 377 ntBASIC0.5□□□□□ -2.33
COL12A1Q99715 snoU109.1-201ENST00000459339 135 ntBASIC0.5□□□□□ -2.33
COL12A1Q99715 AC020699.1-201ENST00000505161 445 ntBASIC0.5□□□□□ -2.33
COL12A1Q99715 AC103851.1-201ENST00000506833 274 ntBASIC0.5□□□□□ -2.33
COL12A1Q99715 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
COL12A1Q99715 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC0.5□□□□□ -2.33
COL12A1Q99715 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.5□□□□□ -2.33
COL12A1Q99715 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC0.5□□□□□ -2.33
COL12A1Q99715 AL355802.3-201ENST00000607571 545 ntBASIC0.5□□□□□ -2.33
COL12A1Q99715 AC243829.3-201ENST00000622177 108 ntBASIC0.5□□□□□ -2.33
COL12A1Q99715 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
COL12A1Q99715 OR5H6-203ENST00000642105 978 ntBASIC0.5□□□□□ -2.33
COL12A1Q99715 RNA5SP368-201ENST00000364298 116 ntBASIC0.5□□□□□ -2.33
COL12A1Q99715 SNORA7.2-201ENST00000364446 145 ntBASIC0.5□□□□□ -2.33
COL12A1Q99715 SNORA16B-201ENST00000364674 135 ntBASIC0.5□□□□□ -2.33
COL12A1Q99715 MIR508-201ENST00000384857 115 ntBASIC0.5□□□□□ -2.33
COL12A1Q99715 ARL2BPP3-201ENST00000421226 480 ntBASIC0.5□□□□□ -2.33
COL12A1Q99715 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
COL12A1Q99715 MTCYBP23-201ENST00000558717 1102 ntBASIC0.5□□□□□ -2.33
COL12A1Q99715 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC0.49□□□□□ -2.33
COL12A1Q99715 RNA5SP205-201ENST00000364653 136 ntBASIC0.49□□□□□ -2.33
COL12A1Q99715 AL356473.1-201ENST00000406203 1408 ntBASIC0.49□□□□□ -2.33
COL12A1Q99715 TOMM22P2-201ENST00000430735 237 ntBASIC0.49□□□□□ -2.33
COL12A1Q99715 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.49□□□□□ -2.33
COL12A1Q99715 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.49□□□□□ -2.33
COL12A1Q99715 AC004817.2-201ENST00000561794 651 ntBASIC0.49□□□□□ -2.33
COL12A1Q99715 AC007792.1-201ENST00000623023 402 ntBASIC0.49□□□□□ -2.33
COL12A1Q99715 MIR198-201ENST00000637333 62 ntBASIC0.49□□□□□ -2.33
COL12A1Q99715 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
COL12A1Q99715 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
COL12A1Q99715 RN7SKP61-201ENST00000410642 295 ntBASIC0.49□□□□□ -2.33
COL12A1Q99715 AC096649.2-201ENST00000416186 393 ntBASIC0.49□□□□□ -2.33
COL12A1Q99715 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
COL12A1Q99715 OR5AL2P-201ENST00000532185 920 ntBASIC0.49□□□□□ -2.33
COL12A1Q99715 MIR5087-201ENST00000635826 76 ntBASIC0.49□□□□□ -2.33
COL12A1Q99715 AL022578.1-201ENST00000439330 1433 ntBASIC0.49□□□□□ -2.33
COL12A1Q99715 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
COL12A1Q99715 RNU6-1077P-201ENST00000410506 102 ntBASIC0.49□□□□□ -2.33
COL12A1Q99715 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC0.49□□□□□ -2.33
COL12A1Q99715 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC0.49□□□□□ -2.33
COL12A1Q99715 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC0.49□□□□□ -2.33
COL12A1Q99715 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.49□□□□□ -2.33
COL12A1Q99715 AC004908.2-201ENST00000609090 574 ntBASIC0.49□□□□□ -2.33
COL12A1Q99715 MIR6076-201ENST00000617521 113 ntBASIC0.49□□□□□ -2.33
COL12A1Q99715 RNU6-1072P-201ENST00000384703 107 ntBASIC0.48□□□□□ -2.33
COL12A1Q99715 RNU6-443P-201ENST00000384780 107 ntBASIC0.48□□□□□ -2.33
COL12A1Q99715 MIR518A2-201ENST00000384966 87 ntBASIC0.48□□□□□ -2.33
COL12A1Q99715 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
COL12A1Q99715 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.48□□□□□ -2.33
COL12A1Q99715 AC006461.1-201ENST00000412637 326 ntBASIC0.48□□□□□ -2.33
COL12A1Q99715 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
COL12A1Q99715 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms