Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 AL513331.1-201ENST00000411908 397 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.53□□□□□ -1.84
SNX18Q96RF0 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SNX18Q96RF0 RPL21P66-201ENST00000426566 466 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 SAR1AP4-201ENST00000429225 591 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.53□□□□□ -1.84
SNX18Q96RF0 AL591212.2-201ENST00000433923 257 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 AC236972.2-201ENST00000434979 310 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.53□□□□□ -1.84
SNX18Q96RF0 NDUFA5P4-201ENST00000436704 385 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 PRDX3P3-201ENST00000447765 522 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 AC006539.3-201ENST00000454258 129 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 SNORD19B-201ENST00000459623 84 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 AP000873.1-201ENST00000463987 400 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 DYNLL1P5-201ENST00000467158 270 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 RPL7P43-201ENST00000478876 753 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 MTCO1P29-201ENST00000496868 288 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 TRBVA-201ENST00000498804 316 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 SLC25A15P5-201ENST00000508033 253 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 HIGD1AP13-201ENST00000509878 289 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.53□□□□□ -1.84
SNX18Q96RF0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.53□□□□□ -1.84
SNX18Q96RF0 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SNX18Q96RF0 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.53□□□□□ -1.84
SNX18Q96RF0 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.53□□□□□ -1.84
SNX18Q96RF0 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.53□□□□□ -1.84
SNX18Q96RF0 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.53□□□□□ -1.84
SNX18Q96RF0 AL121821.2-201ENST00000556081 394 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.53□□□□□ -1.84
SNX18Q96RF0 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.53□□□□□ -1.84
SNX18Q96RF0 FRG2DP-202ENST00000566967 323 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.53□□□□□ -1.84
SNX18Q96RF0 AC022893.3-201ENST00000607665 437 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 MIR6868-201ENST00000611215 58 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 MIR6875-201ENST00000617506 72 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 AC103705.1-201ENST00000619013 241 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 AC112200.1-201ENST00000625015 234 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.53□□□□□ -1.84
SNX18Q96RF0 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
SNX18Q96RF0 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SNX18Q96RF0 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SNX18Q96RF0 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SNX18Q96RF0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.85
SNX18Q96RF0 RLIMP1-201ENST00000339626 1680 ntBASIC3.52□□□□□ -1.85
SNX18Q96RF0 HSPA8P4-201ENST00000511877 1920 ntBASIC3.52□□□□□ -1.85
SNX18Q96RF0 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SNX18Q96RF0 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.52□□□□□ -1.85
SNX18Q96RF0 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SNX18Q96RF0 Y_RNA.138-201ENST00000363462 102 ntBASIC3.52□□□□□ -1.85
SNX18Q96RF0 RNA5SP399-201ENST00000364003 117 ntBASIC3.52□□□□□ -1.85
SNX18Q96RF0 RN7SKP280-201ENST00000364196 304 ntBASIC3.52□□□□□ -1.85
SNX18Q96RF0 Y_RNA.259-201ENST00000364619 101 ntBASIC3.52□□□□□ -1.85
SNX18Q96RF0 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.52□□□□□ -1.85
SNX18Q96RF0 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.52□□□□□ -1.85
SNX18Q96RF0 RNU6-393P-201ENST00000384475 107 ntBASIC3.52□□□□□ -1.85
SNX18Q96RF0 AC005534.2-201ENST00000431047 433 ntBASIC3.52□□□□□ -1.85
SNX18Q96RF0 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.52□□□□□ -1.85
SNX18Q96RF0 VN1R17P-201ENST00000472048 1090 ntBASIC3.52□□□□□ -1.85
SNX18Q96RF0 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.52□□□□□ -1.85
SNX18Q96RF0 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SNX18Q96RF0 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SNX18Q96RF0 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.52□□□□□ -1.85
SNX18Q96RF0 AL359273.1-201ENST00000510918 627 ntBASIC3.52□□□□□ -1.85
SNX18Q96RF0 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.52□□□□□ -1.85
SNX18Q96RF0 RNU6-559P-201ENST00000516151 98 ntBASIC3.52□□□□□ -1.85
SNX18Q96RF0 SNORA31.8-201ENST00000516327 108 ntBASIC3.52□□□□□ -1.85
SNX18Q96RF0 AC087369.1-201ENST00000520775 996 ntBASIC3.52□□□□□ -1.85
SNX18Q96RF0 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.52□□□□□ -1.85
SNX18Q96RF0 YPEL5P3-201ENST00000547227 352 ntBASIC3.52□□□□□ -1.85
SNX18Q96RF0 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.52□□□□□ -1.85
SNX18Q96RF0 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.52□□□□□ -1.85
SNX18Q96RF0 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.52□□□□□ -1.85
SNX18Q96RF0 AC034105.4-201ENST00000568304 277 ntBASIC3.52□□□□□ -1.85
SNX18Q96RF0 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.52□□□□□ -1.85
SNX18Q96RF0 MIR3672-201ENST00000584290 82 ntBASIC3.52□□□□□ -1.85
SNX18Q96RF0 AC002545.1-201ENST00000592511 181 ntBASIC3.52□□□□□ -1.85
SNX18Q96RF0 AL670379.10-201ENST00000604330 253 ntBASIC3.52□□□□□ -1.85
SNX18Q96RF0 APOOP1-201ENST00000604695 592 ntBASIC3.52□□□□□ -1.85
SNX18Q96RF0 AC245389.1-201ENST00000605141 529 ntBASIC3.52□□□□□ -1.85
SNX18Q96RF0 AL670379.9-201ENST00000605428 253 ntBASIC3.52□□□□□ -1.85
SNX18Q96RF0 AP002826.1-201ENST00000608835 315 ntBASIC3.52□□□□□ -1.85
SNX18Q96RF0 U2.17-201ENST00000611454 95 ntBASIC3.52□□□□□ -1.85
SNX18Q96RF0 MTND4LP32-201ENST00000636111 270 ntBASIC3.52□□□□□ -1.85
SNX18Q96RF0 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SNX18Q96RF0 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.52□□□□□ -1.85
SNX18Q96RF0 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.52□□□□□ -1.85
SNX18Q96RF0 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
SNX18Q96RF0 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.51□□□□□ -1.85
SNX18Q96RF0 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SNX18Q96RF0 RNU6-254P-201ENST00000363377 107 ntBASIC3.51□□□□□ -1.85
SNX18Q96RF0 Y_RNA.339-201ENST00000365325 102 ntBASIC3.51□□□□□ -1.85
SNX18Q96RF0 MIR199A2-201ENST00000385289 110 ntBASIC3.51□□□□□ -1.85
SNX18Q96RF0 RNU4-14P-201ENST00000410858 122 ntBASIC3.51□□□□□ -1.85
SNX18Q96RF0 RPS12P24-201ENST00000412619 387 ntBASIC3.51□□□□□ -1.85
SNX18Q96RF0 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.51□□□□□ -1.85
SNX18Q96RF0 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.51□□□□□ -1.85
SNX18Q96RF0 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms