Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM47Q96LD4 RNU7-87P-201ENST00000459343 62 ntBASIC5.56□□□□□ -1.52
TRIM47Q96LD4 RNU6-168P-201ENST00000516189 101 ntBASIC5.56□□□□□ -1.52
TRIM47Q96LD4 Y_RNA.709-201ENST00000516952 92 ntBASIC5.56□□□□□ -1.52
TRIM47Q96LD4 AC090151.1-201ENST00000520784 730 ntBASIC5.56□□□□□ -1.52
TRIM47Q96LD4 AC090281.1-201ENST00000523019 276 ntBASIC5.56□□□□□ -1.52
TRIM47Q96LD4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM47Q96LD4 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM47Q96LD4 AC115085.1-201ENST00000588924 229 ntBASIC5.56□□□□□ -1.52
TRIM47Q96LD4 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM47Q96LD4 SNORD113-5-201ENST00000607261 78 ntBASIC5.56□□□□□ -1.52
TRIM47Q96LD4 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM47Q96LD4 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM47Q96LD4 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM47Q96LD4 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
TRIM47Q96LD4 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM47Q96LD4 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM47Q96LD4 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM47Q96LD4 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM47Q96LD4 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM47Q96LD4 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM47Q96LD4 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM47Q96LD4 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM47Q96LD4 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM47Q96LD4 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM47Q96LD4 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
TRIM47Q96LD4 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM47Q96LD4 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM47Q96LD4 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM47Q96LD4 RNU6-312P-201ENST00000364629 107 ntBASIC5.55□□□□□ -1.52
TRIM47Q96LD4 Y_RNA.571-201ENST00000384753 98 ntBASIC5.55□□□□□ -1.52
TRIM47Q96LD4 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
TRIM47Q96LD4 AL357515.1-201ENST00000402967 542 ntBASIC5.55□□□□□ -1.52
TRIM47Q96LD4 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM47Q96LD4 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM47Q96LD4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM47Q96LD4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM47Q96LD4 SEPT7P4-201ENST00000437076 306 ntBASIC5.55□□□□□ -1.52
TRIM47Q96LD4 RPS17P13-201ENST00000448974 407 ntBASIC5.55□□□□□ -1.52
TRIM47Q96LD4 AL133244.1-201ENST00000456007 258 ntBASIC5.55□□□□□ -1.52
TRIM47Q96LD4 AC091959.1-201ENST00000495857 238 ntBASIC5.55□□□□□ -1.52
TRIM47Q96LD4 AC005840.1-201ENST00000498412 377 ntBASIC5.55□□□□□ -1.52
TRIM47Q96LD4 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM47Q96LD4 SNORA25.12-201ENST00000516202 82 ntBASIC5.55□□□□□ -1.52
TRIM47Q96LD4 CASP1P1-201ENST00000526345 212 ntBASIC5.55□□□□□ -1.52
TRIM47Q96LD4 AC133555.2-201ENST00000550213 292 ntBASIC5.55□□□□□ -1.52
TRIM47Q96LD4 FKBP1BP1-201ENST00000553366 325 ntBASIC5.55□□□□□ -1.52
TRIM47Q96LD4 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM47Q96LD4 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM47Q96LD4 AC023043.4-201ENST00000612081 449 ntBASIC5.55□□□□□ -1.52
TRIM47Q96LD4 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM47Q96LD4 AL137003.2-201ENST00000606924 2538 ntBASIC5.55□□□□□ -1.52
TRIM47Q96LD4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM47Q96LD4 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
TRIM47Q96LD4 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM47Q96LD4 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM47Q96LD4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM47Q96LD4 MTND5P32-201ENST00000560711 1802 ntBASIC5.55□□□□□ -1.52
TRIM47Q96LD4 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM47Q96LD4 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
TRIM47Q96LD4 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM47Q96LD4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM47Q96LD4 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM47Q96LD4 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.54□□□□□ -1.52
TRIM47Q96LD4 AC000374.1-201ENST00000434698 1745 ntBASIC5.54□□□□□ -1.52
TRIM47Q96LD4 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM47Q96LD4 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM47Q96LD4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM47Q96LD4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM47Q96LD4 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM47Q96LD4 RNU6-701P-201ENST00000384059 107 ntBASIC5.54□□□□□ -1.52
TRIM47Q96LD4 SNORA20-201ENST00000384662 132 ntBASIC5.54□□□□□ -1.52
TRIM47Q96LD4 RNU6-516P-201ENST00000411381 104 ntBASIC5.54□□□□□ -1.52
TRIM47Q96LD4 AC092809.3-201ENST00000415453 231 ntBASIC5.54□□□□□ -1.52
TRIM47Q96LD4 RPL30P13-201ENST00000418873 348 ntBASIC5.54□□□□□ -1.52
TRIM47Q96LD4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM47Q96LD4 HMGB1P21-201ENST00000502313 581 ntBASIC5.54□□□□□ -1.52
TRIM47Q96LD4 Y_RNA.694-201ENST00000516677 117 ntBASIC5.54□□□□□ -1.52
TRIM47Q96LD4 RPL23AP53-201ENST00000521854 457 ntBASIC5.54□□□□□ -1.52
TRIM47Q96LD4 AC115990.1-201ENST00000526957 301 ntBASIC5.54□□□□□ -1.52
TRIM47Q96LD4 AC106785.1-201ENST00000565935 262 ntBASIC5.54□□□□□ -1.52
TRIM47Q96LD4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM47Q96LD4 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM47Q96LD4 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
TRIM47Q96LD4 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.54□□□□□ -1.52
TRIM47Q96LD4 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
TRIM47Q96LD4 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
TRIM47Q96LD4 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
TRIM47Q96LD4 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM47Q96LD4 RAD17P1-201ENST00000418130 2042 ntBASIC5.53□□□□□ -1.52
TRIM47Q96LD4 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM47Q96LD4 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM47Q96LD4 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
TRIM47Q96LD4 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM47Q96LD4 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM47Q96LD4 SNORA73.1-201ENST00000363107 205 ntBASIC5.53□□□□□ -1.52
TRIM47Q96LD4 RNA5SP28-201ENST00000363841 119 ntBASIC5.53□□□□□ -1.52
TRIM47Q96LD4 Y_RNA.563-201ENST00000384707 108 ntBASIC5.53□□□□□ -1.52
TRIM47Q96LD4 RNU4-30P-201ENST00000410245 143 ntBASIC5.53□□□□□ -1.52
TRIM47Q96LD4 EBAG9P1-201ENST00000418955 543 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms