Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 AL590233.1-201ENST00000430017 456 ntBASIC1.39□□□□□ -2.19
ALPK3Q96L96 MICF-203ENST00000432679 129 ntBASIC1.39□□□□□ -2.19
ALPK3Q96L96 THAP5P1-201ENST00000439089 262 ntBASIC1.39□□□□□ -2.19
ALPK3Q96L96 SCARNA3-201ENST00000517097 143 ntBASIC1.39□□□□□ -2.19
ALPK3Q96L96 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
ALPK3Q96L96 AC090821.2-201ENST00000523552 176 ntBASIC1.39□□□□□ -2.19
ALPK3Q96L96 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.39□□□□□ -2.19
ALPK3Q96L96 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.39□□□□□ -2.19
ALPK3Q96L96 HMGB1P14-201ENST00000557424 591 ntBASIC1.39□□□□□ -2.19
ALPK3Q96L96 GAS5-AS1-201ENST00000602767 694 ntBASIC1.39□□□□□ -2.19
ALPK3Q96L96 AL109918.3-201ENST00000603072 338 ntBASIC1.39□□□□□ -2.19
ALPK3Q96L96 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.39□□□□□ -2.19
ALPK3Q96L96 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
ALPK3Q96L96 SNORD56-201ENST00000413522 71 ntBASIC1.38□□□□□ -2.19
ALPK3Q96L96 AL022400.1-201ENST00000423946 935 ntBASIC1.38□□□□□ -2.19
ALPK3Q96L96 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC1.38□□□□□ -2.19
ALPK3Q96L96 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.38□□□□□ -2.19
ALPK3Q96L96 AC092757.1-201ENST00000467293 467 ntBASIC1.38□□□□□ -2.19
ALPK3Q96L96 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.38□□□□□ -2.19
ALPK3Q96L96 RNU5F-8P-201ENST00000515941 111 ntBASIC1.38□□□□□ -2.19
ALPK3Q96L96 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.38□□□□□ -2.19
ALPK3Q96L96 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.38□□□□□ -2.19
ALPK3Q96L96 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.38□□□□□ -2.19
ALPK3Q96L96 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
ALPK3Q96L96 RNU6-882P-201ENST00000391025 103 ntBASIC1.38□□□□□ -2.19
ALPK3Q96L96 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.38□□□□□ -2.19
ALPK3Q96L96 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC1.38□□□□□ -2.19
ALPK3Q96L96 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.38□□□□□ -2.19
ALPK3Q96L96 HMGN1P33-201ENST00000432945 451 ntBASIC1.38□□□□□ -2.19
ALPK3Q96L96 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.38□□□□□ -2.19
ALPK3Q96L96 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.38□□□□□ -2.19
ALPK3Q96L96 COL6A4P2-205ENST00000509855 506 ntBASIC1.38□□□□□ -2.19
ALPK3Q96L96 RNA5SP61-201ENST00000516453 100 ntBASIC1.38□□□□□ -2.19
ALPK3Q96L96 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC1.38□□□□□ -2.19
ALPK3Q96L96 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.38□□□□□ -2.19
ALPK3Q96L96 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC1.38□□□□□ -2.19
ALPK3Q96L96 AC012669.1-201ENST00000603209 283 ntBASIC1.38□□□□□ -2.19
ALPK3Q96L96 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.38□□□□□ -2.19
ALPK3Q96L96 AC096586.1-201ENST00000610267 561 ntBASIC1.38□□□□□ -2.19
ALPK3Q96L96 AC006213.4-201ENST00000616184 634 ntBASIC1.38□□□□□ -2.19
ALPK3Q96L96 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.37□□□□□ -2.19
ALPK3Q96L96 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
ALPK3Q96L96 MIR373-201ENST00000362273 69 ntBASIC1.37□□□□□ -2.19
ALPK3Q96L96 RNU6-921P-201ENST00000384361 107 ntBASIC1.37□□□□□ -2.19
ALPK3Q96L96 RNA5SP465-201ENST00000391195 109 ntBASIC1.37□□□□□ -2.19
ALPK3Q96L96 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.37□□□□□ -2.19
ALPK3Q96L96 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.37□□□□□ -2.19
ALPK3Q96L96 EIF4EP4-201ENST00000424916 578 ntBASIC1.37□□□□□ -2.19
ALPK3Q96L96 AC079780.1-201ENST00000428259 207 ntBASIC1.37□□□□□ -2.19
ALPK3Q96L96 AL512661.1-201ENST00000434586 1253 ntBASIC1.37□□□□□ -2.19
ALPK3Q96L96 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.37□□□□□ -2.19
ALPK3Q96L96 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.37□□□□□ -2.19
ALPK3Q96L96 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.37□□□□□ -2.19
ALPK3Q96L96 AC021146.8-201ENST00000507455 733 ntBASIC1.37□□□□□ -2.19
ALPK3Q96L96 AC118273.2-201ENST00000532092 465 ntBASIC1.37□□□□□ -2.19
ALPK3Q96L96 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.37□□□□□ -2.19
ALPK3Q96L96 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.37□□□□□ -2.19
ALPK3Q96L96 AC023825.1-201ENST00000566704 1030 ntBASIC1.37□□□□□ -2.19
ALPK3Q96L96 BX322635.1-201ENST00000605804 496 ntBASIC1.37□□□□□ -2.19
ALPK3Q96L96 AC106052.1-201ENST00000608029 497 ntBASIC1.37□□□□□ -2.19
ALPK3Q96L96 AC009318.4-201ENST00000620496 486 ntBASIC1.37□□□□□ -2.19
ALPK3Q96L96 AC109454.4-201ENST00000623411 649 ntBASIC1.37□□□□□ -2.19
ALPK3Q96L96 AC025263.3-201ENST00000622965 1396 ntBASIC1.37□□□□□ -2.19
ALPK3Q96L96 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
ALPK3Q96L96 AL121978.1-201ENST00000402778 359 ntBASIC1.36□□□□□ -2.19
ALPK3Q96L96 RPS3AP24-201ENST00000407896 734 ntBASIC1.36□□□□□ -2.19
ALPK3Q96L96 VN1R36P-201ENST00000414936 291 ntBASIC1.36□□□□□ -2.19
ALPK3Q96L96 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.36□□□□□ -2.19
ALPK3Q96L96 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.36□□□□□ -2.19
ALPK3Q96L96 AC092170.1-201ENST00000440211 356 ntBASIC1.36□□□□□ -2.19
ALPK3Q96L96 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
ALPK3Q96L96 AC055731.1-201ENST00000474387 401 ntBASIC1.36□□□□□ -2.19
ALPK3Q96L96 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.36□□□□□ -2.19
ALPK3Q96L96 AC093752.1-206ENST00000511823 336 ntBASIC1.36□□□□□ -2.19
ALPK3Q96L96 AC022447.1-201ENST00000515358 464 ntBASIC1.36□□□□□ -2.19
ALPK3Q96L96 AP003066.2-201ENST00000529375 555 ntBASIC1.36□□□□□ -2.19
ALPK3Q96L96 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
ALPK3Q96L96 AC011260.1-201ENST00000578420 472 ntBASIC1.36□□□□□ -2.19
ALPK3Q96L96 MIR4714-201ENST00000580728 77 ntBASIC1.36□□□□□ -2.19
ALPK3Q96L96 AC012443.1-201ENST00000605605 231 ntBASIC1.36□□□□□ -2.19
ALPK3Q96L96 AC080100.1-201ENST00000624239 5356 ntBASIC1.36□□□□□ -2.19
ALPK3Q96L96 Y_RNA.393-201ENST00000383936 102 ntBASIC1.36□□□□□ -2.19
ALPK3Q96L96 AL356432.1-201ENST00000405809 419 ntBASIC1.36□□□□□ -2.19
ALPK3Q96L96 CYCSP33-201ENST00000414485 327 ntBASIC1.36□□□□□ -2.19
ALPK3Q96L96 HGF-207ENST00000453018 721 ntTSL 3 BASIC1.36□□□□□ -2.19
ALPK3Q96L96 OR9N1P-202ENST00000494289 481 ntBASIC1.36□□□□□ -2.19
ALPK3Q96L96 AC093801.2-201ENST00000503966 1050 ntBASIC1.36□□□□□ -2.19
ALPK3Q96L96 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.36□□□□□ -2.19
ALPK3Q96L96 MTCYBP27-201ENST00000555160 670 ntBASIC1.36□□□□□ -2.19
ALPK3Q96L96 AC233266.2-201ENST00000567067 528 ntBASIC1.36□□□□□ -2.19
ALPK3Q96L96 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.36□□□□□ -2.19
ALPK3Q96L96 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.36□□□□□ -2.19
ALPK3Q96L96 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.36□□□□□ -2.19
ALPK3Q96L96 AL031176.1-201ENST00000604554 466 ntBASIC1.36□□□□□ -2.19
ALPK3Q96L96 AL355297.2-201ENST00000604792 129 ntBASIC1.36□□□□□ -2.19
ALPK3Q96L96 AL163051.2-201ENST00000618976 735 ntBASIC1.36□□□□□ -2.19
ALPK3Q96L96 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
ALPK3Q96L96 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
ALPK3Q96L96 RNU2-15P-201ENST00000410692 191 ntBASIC1.35□□□□□ -2.19
ALPK3Q96L96 USP9YP19-201ENST00000412165 485 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms