Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC0.55□□□□□ -2.32
SPG11Q96JI7 MIR6718-201ENST00000616153 80 ntBASIC0.55□□□□□ -2.32
SPG11Q96JI7 AL589935.2-201ENST00000616471 1231 ntBASIC0.55□□□□□ -2.32
SPG11Q96JI7 AL162373.1-201ENST00000620433 407 ntBASIC0.55□□□□□ -2.32
SPG11Q96JI7 AC068787.1-201ENST00000623908 691 ntBASIC0.55□□□□□ -2.32
SPG11Q96JI7 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
SPG11Q96JI7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
SPG11Q96JI7 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
SPG11Q96JI7 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
SPG11Q96JI7 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC0.54□□□□□ -2.32
SPG11Q96JI7 VN1R42P-201ENST00000424651 344 ntBASIC0.54□□□□□ -2.32
SPG11Q96JI7 AC092628.1-201ENST00000436250 252 ntBASIC0.54□□□□□ -2.32
SPG11Q96JI7 HMGN2P16-201ENST00000456802 261 ntBASIC0.54□□□□□ -2.32
SPG11Q96JI7 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
SPG11Q96JI7 AC023050.1-201ENST00000498198 304 ntBASIC0.54□□□□□ -2.32
SPG11Q96JI7 AP003355.1-201ENST00000518956 587 ntBASIC0.54□□□□□ -2.32
SPG11Q96JI7 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.54□□□□□ -2.32
SPG11Q96JI7 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC0.54□□□□□ -2.32
SPG11Q96JI7 uc_338.9-201ENST00000617424 182 ntBASIC0.54□□□□□ -2.32
SPG11Q96JI7 AC110079.1-202ENST00000635213 138 ntBASIC0.54□□□□□ -2.32
SPG11Q96JI7 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
SPG11Q96JI7 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.54□□□□□ -2.32
SPG11Q96JI7 RNU6-50P-201ENST00000362356 103 ntBASIC0.54□□□□□ -2.32
SPG11Q96JI7 SNORD114-3-201ENST00000364969 75 ntBASIC0.54□□□□□ -2.32
SPG11Q96JI7 OSTCP8-201ENST00000445117 448 ntBASIC0.54□□□□□ -2.32
SPG11Q96JI7 SUMO2P2-201ENST00000456482 255 ntBASIC0.54□□□□□ -2.32
SPG11Q96JI7 AC005908.1-201ENST00000468701 347 ntBASIC0.54□□□□□ -2.32
SPG11Q96JI7 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
SPG11Q96JI7 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.54□□□□□ -2.32
SPG11Q96JI7 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.54□□□□□ -2.32
SPG11Q96JI7 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
SPG11Q96JI7 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.54□□□□□ -2.32
SPG11Q96JI7 AC009220.3-201ENST00000604318 586 ntBASIC0.54□□□□□ -2.32
SPG11Q96JI7 AC025594.3-201ENST00000613068 790 ntBASIC0.54□□□□□ -2.32
SPG11Q96JI7 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC0.54□□□□□ -2.32
SPG11Q96JI7 AC097372.5-201ENST00000623665 376 ntBASIC0.54□□□□□ -2.32
SPG11Q96JI7 AC091932.3-201ENST00000624223 323 ntBASIC0.54□□□□□ -2.32
SPG11Q96JI7 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.53□□□□□ -2.32
SPG11Q96JI7 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
SPG11Q96JI7 RNA5SP118-201ENST00000410385 109 ntBASIC0.53□□□□□ -2.32
SPG11Q96JI7 RNU6-733P-201ENST00000410759 104 ntBASIC0.53□□□□□ -2.32
SPG11Q96JI7 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC0.53□□□□□ -2.32
SPG11Q96JI7 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
SPG11Q96JI7 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.53□□□□□ -2.32
SPG11Q96JI7 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.53□□□□□ -2.32
SPG11Q96JI7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC0.53□□□□□ -2.32
SPG11Q96JI7 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.53□□□□□ -2.32
SPG11Q96JI7 AL121839.1-201ENST00000556233 1185 ntBASIC0.53□□□□□ -2.32
SPG11Q96JI7 LINC00557-201ENST00000563184 1279 ntBASIC0.53□□□□□ -2.32
SPG11Q96JI7 MIR4305-201ENST00000583252 102 ntBASIC0.53□□□□□ -2.32
SPG11Q96JI7 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC0.53□□□□□ -2.32
SPG11Q96JI7 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC0.53□□□□□ -2.33
SPG11Q96JI7 MIR604-201ENST00000384880 94 ntBASIC0.53□□□□□ -2.33
SPG11Q96JI7 RN7SKP61-201ENST00000410642 295 ntBASIC0.53□□□□□ -2.33
SPG11Q96JI7 ELOCP6-201ENST00000429066 328 ntBASIC0.53□□□□□ -2.33
SPG11Q96JI7 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.53□□□□□ -2.33
SPG11Q96JI7 ELOCP12-201ENST00000458706 328 ntBASIC0.53□□□□□ -2.33
SPG11Q96JI7 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC0.53□□□□□ -2.33
SPG11Q96JI7 RPL31P60-201ENST00000478450 367 ntBASIC0.53□□□□□ -2.33
SPG11Q96JI7 AL135752.1-201ENST00000479477 471 ntBASIC0.53□□□□□ -2.33
SPG11Q96JI7 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC0.53□□□□□ -2.33
SPG11Q96JI7 AC025768.1-201ENST00000510057 267 ntBASIC0.53□□□□□ -2.33
SPG11Q96JI7 SMARCE1P4-201ENST00000523647 241 ntBASIC0.53□□□□□ -2.33
SPG11Q96JI7 AC023824.2-201ENST00000566185 400 ntBASIC0.53□□□□□ -2.33
SPG11Q96JI7 COX6CP3-201ENST00000580869 223 ntBASIC0.53□□□□□ -2.33
SPG11Q96JI7 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC0.53□□□□□ -2.33
SPG11Q96JI7 AC007275.1-201ENST00000621243 671 ntBASIC0.53□□□□□ -2.33
SPG11Q96JI7 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC0.53□□□□□ -2.33
SPG11Q96JI7 AC087359.1-201ENST00000508335 1740 ntBASIC0.52□□□□□ -2.33
SPG11Q96JI7 AL022578.1-201ENST00000439330 1433 ntBASIC0.52□□□□□ -2.33
SPG11Q96JI7 Y_RNA.288-201ENST00000364854 92 ntBASIC0.52□□□□□ -2.33
SPG11Q96JI7 RNU6-225P-201ENST00000384613 103 ntBASIC0.52□□□□□ -2.33
SPG11Q96JI7 SSR1P1-201ENST00000407630 814 ntBASIC0.52□□□□□ -2.33
SPG11Q96JI7 HMGN2P21-201ENST00000447764 270 ntBASIC0.52□□□□□ -2.33
SPG11Q96JI7 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
SPG11Q96JI7 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.52□□□□□ -2.33
SPG11Q96JI7 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.52□□□□□ -2.33
SPG11Q96JI7 HMGN1P30-201ENST00000589286 268 ntBASIC0.52□□□□□ -2.33
SPG11Q96JI7 AC109809.1-201ENST00000619665 545 ntBASIC0.52□□□□□ -2.33
SPG11Q96JI7 AC006249.1-201ENST00000621223 471 ntBASIC0.52□□□□□ -2.33
SPG11Q96JI7 AC132825.8-201ENST00000640783 297 ntBASIC0.52□□□□□ -2.33
SPG11Q96JI7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.52□□□□□ -2.33
SPG11Q96JI7 SNORA7.2-201ENST00000364446 145 ntBASIC0.52□□□□□ -2.33
SPG11Q96JI7 LAMTOR3P1-201ENST00000428620 370 ntBASIC0.52□□□□□ -2.33
SPG11Q96JI7 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.52□□□□□ -2.33
SPG11Q96JI7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.52□□□□□ -2.33
SPG11Q96JI7 RNU7-26P-201ENST00000458980 63 ntBASIC0.52□□□□□ -2.33
SPG11Q96JI7 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC0.52□□□□□ -2.33
SPG11Q96JI7 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC0.52□□□□□ -2.33
SPG11Q96JI7 AC002545.1-201ENST00000592511 181 ntBASIC0.52□□□□□ -2.33
SPG11Q96JI7 AL133507.1-201ENST00000605269 557 ntBASIC0.52□□□□□ -2.33
SPG11Q96JI7 Y_RNA.804-201ENST00000615262 101 ntBASIC0.52□□□□□ -2.33
SPG11Q96JI7 MIR6076-201ENST00000617521 113 ntBASIC0.52□□□□□ -2.33
SPG11Q96JI7 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.52□□□□□ -2.33
SPG11Q96JI7 MIR92A2-201ENST00000385299 75 ntBASIC0.51□□□□□ -2.33
SPG11Q96JI7 RPL23AP32-201ENST00000395315 459 ntBASIC0.51□□□□□ -2.33
SPG11Q96JI7 AC244098.2-201ENST00000422068 99 ntBASIC0.51□□□□□ -2.33
SPG11Q96JI7 SNRPEP4-201ENST00000435815 279 ntBASIC0.51□□□□□ -2.33
SPG11Q96JI7 RPL21P104-201ENST00000464143 478 ntBASIC0.51□□□□□ -2.33
SPG11Q96JI7 MTCO3P35-201ENST00000485582 781 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms