Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AL133216.2-202ENST00000634512 349 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 AL512643.1-201ENST00000635735 524 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 Z99571.1-201ENST00000636677 394 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 AC006026.1-201ENST00000444025 1803 ntBASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
CTHRC1Q96CG8 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 MIR423-201ENST00000362201 94 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 Y_RNA.67-201ENST00000362870 100 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 RNU6-1252P-201ENST00000363054 104 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 RNU1-18P-201ENST00000363062 164 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 SNORA4.3-201ENST00000365564 137 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 Y_RNA.387-201ENST00000383918 102 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 Y_RNA.431-201ENST00000384086 102 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 MIR450B-201ENST00000401182 78 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 RNA5SP129-201ENST00000410276 118 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 AC063979.1-201ENST00000415539 377 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 RPLP0P7-201ENST00000416050 667 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 AC091390.3-201ENST00000426478 338 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 AL669831.1-202ENST00000428504 417 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 RPL23AP69-201ENST00000431134 458 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 HSPD1P21-201ENST00000436541 245 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 GTF2IP13-201ENST00000438487 386 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 NOTCH2P1-201ENST00000443481 624 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 SNORA84-201ENST00000459229 133 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 AC012181.1-201ENST00000479895 423 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 NDUFB4P9-201ENST00000511646 388 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 RPL39P5-202ENST00000512505 151 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 SNORA14.1-201ENST00000516113 141 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 RNU6-277P-201ENST00000516272 106 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 Y_RNA.682-201ENST00000516457 100 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 SNORA67.7-201ENST00000516664 135 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 RNU6-256P-201ENST00000516747 97 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 RNA5SP468-201ENST00000516782 93 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 RNA5SP143-201ENST00000516936 115 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 RNU6-273P-201ENST00000516937 96 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 RNU1-45P-201ENST00000517191 141 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 AC023632.4-201ENST00000517783 191 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 CYCSP27-201ENST00000527643 293 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 AC093027.1-201ENST00000546698 429 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 MIR548AC-201ENST00000585049 88 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 MIR3942-201ENST00000585264 109 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 AC044792.1-201ENST00000593294 196 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 AC012119.1-201ENST00000603184 222 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 AC106900.2-201ENST00000604994 317 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 AC039056.2-201ENST00000622261 511 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 ZNF285B-201ENST00000561698 1767 ntBASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CTHRC1Q96CG8 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 Y_RNA.245-201ENST00000364493 95 ntBASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 Y_RNA.480-201ENST00000384364 102 ntBASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 U8.11-201ENST00000384699 133 ntBASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 U8.12-201ENST00000384701 133 ntBASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 FAT1P1-201ENST00000406588 507 ntBASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 RNU6ATAC-201ENST00000408749 126 ntBASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 AL139396.1-201ENST00000421137 167 ntBASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 AC007919.1-201ENST00000429380 217 ntBASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 AL592045.1-201ENST00000429867 352 ntBASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 AC107399.1-201ENST00000451226 265 ntBASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 AC233279.1-201ENST00000455300 423 ntBASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 U8.18-201ENST00000459285 133 ntBASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 VN1R17P-201ENST00000472048 1090 ntBASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 RPL21P129-201ENST00000491732 478 ntBASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 RNA5SP471-201ENST00000516971 106 ntBASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 AC007991.1-201ENST00000522680 631 ntBASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 CBX3P7-201ENST00000532876 502 ntBASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 MIR1273C-201ENST00000578669 77 ntBASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 MIR3158-1-201ENST00000583596 81 ntBASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 AL161798.1-201ENST00000604630 131 ntBASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 AL442067.2-201ENST00000614033 363 ntBASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.46□□□□□ -1.86
CTHRC1Q96CG8 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms