Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 MIR3186-201ENST00000577404 85 ntBASIC3.63□□□□□ -1.83
ATP2A3Q93084 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.63□□□□□ -1.83
ATP2A3Q93084 AL162413.1-201ENST00000603198 110 ntBASIC3.63□□□□□ -1.83
ATP2A3Q93084 RMST_8.1-201ENST00000610287 165 ntBASIC3.63□□□□□ -1.83
ATP2A3Q93084 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.63□□□□□ -1.83
ATP2A3Q93084 U4.6-201ENST00000621618 127 ntBASIC3.63□□□□□ -1.83
ATP2A3Q93084 AC010338.1-201ENST00000621823 717 ntBASIC3.63□□□□□ -1.83
ATP2A3Q93084 AC110801.1-201ENST00000623590 212 ntBASIC3.63□□□□□ -1.83
ATP2A3Q93084 AC009033.1-201ENST00000624279 431 ntBASIC3.63□□□□□ -1.83
ATP2A3Q93084 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
ATP2A3Q93084 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.63□□□□□ -1.83
ATP2A3Q93084 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.63□□□□□ -1.83
ATP2A3Q93084 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.63□□□□□ -1.83
ATP2A3Q93084 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATP2A3Q93084 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ATP2A3Q93084 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
ATP2A3Q93084 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.62□□□□□ -1.83
ATP2A3Q93084 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATP2A3Q93084 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATP2A3Q93084 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ATP2A3Q93084 Y_RNA.22-201ENST00000362492 102 ntBASIC3.62□□□□□ -1.83
ATP2A3Q93084 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATP2A3Q93084 SNORD17-201ENST00000390930 237 ntBASIC3.62□□□□□ -1.83
ATP2A3Q93084 AL359634.1-202ENST00000404721 284 ntBASIC3.62□□□□□ -1.83
ATP2A3Q93084 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.62□□□□□ -1.83
ATP2A3Q93084 MTND1P14-201ENST00000427400 950 ntBASIC3.62□□□□□ -1.83
ATP2A3Q93084 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.62□□□□□ -1.83
ATP2A3Q93084 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.62□□□□□ -1.83
ATP2A3Q93084 NDUFB4P6-201ENST00000436819 366 ntBASIC3.62□□□□□ -1.83
ATP2A3Q93084 RPS15AP9-201ENST00000439856 381 ntBASIC3.62□□□□□ -1.83
ATP2A3Q93084 MTND4LP16-201ENST00000440828 295 ntBASIC3.62□□□□□ -1.83
ATP2A3Q93084 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.62□□□□□ -1.83
ATP2A3Q93084 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.62□□□□□ -1.83
ATP2A3Q93084 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.62□□□□□ -1.83
ATP2A3Q93084 DDX3P2-201ENST00000446138 111 ntBASIC3.62□□□□□ -1.83
ATP2A3Q93084 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.62□□□□□ -1.83
ATP2A3Q93084 AC083798.1-201ENST00000472671 131 ntBASIC3.62□□□□□ -1.83
ATP2A3Q93084 AC010631.1-201ENST00000474150 156 ntBASIC3.62□□□□□ -1.83
ATP2A3Q93084 HSPE1P6-201ENST00000479457 291 ntBASIC3.62□□□□□ -1.83
ATP2A3Q93084 MTCO2P30-201ENST00000503662 364 ntBASIC3.62□□□□□ -1.83
ATP2A3Q93084 GMPSP1-201ENST00000514075 579 ntBASIC3.62□□□□□ -1.83
ATP2A3Q93084 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.62□□□□□ -1.83
ATP2A3Q93084 AP006245.1-201ENST00000522549 120 ntBASIC3.62□□□□□ -1.83
ATP2A3Q93084 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.62□□□□□ -1.83
ATP2A3Q93084 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ATP2A3Q93084 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.62□□□□□ -1.83
ATP2A3Q93084 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.62□□□□□ -1.83
ATP2A3Q93084 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.62□□□□□ -1.83
ATP2A3Q93084 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.62□□□□□ -1.83
ATP2A3Q93084 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.62□□□□□ -1.83
ATP2A3Q93084 AL670379.6-201ENST00000603753 252 ntBASIC3.62□□□□□ -1.83
ATP2A3Q93084 AL670379.11-201ENST00000604059 253 ntBASIC3.62□□□□□ -1.83
ATP2A3Q93084 AC008162.1-201ENST00000604718 254 ntBASIC3.62□□□□□ -1.83
ATP2A3Q93084 AL670379.1-201ENST00000604752 252 ntBASIC3.62□□□□□ -1.83
ATP2A3Q93084 AL670379.5-201ENST00000605253 252 ntBASIC3.62□□□□□ -1.83
ATP2A3Q93084 AL670379.12-201ENST00000605291 253 ntBASIC3.62□□□□□ -1.83
ATP2A3Q93084 AL670379.8-201ENST00000605353 252 ntBASIC3.62□□□□□ -1.83
ATP2A3Q93084 AL670379.7-201ENST00000605823 252 ntBASIC3.62□□□□□ -1.83
ATP2A3Q93084 AL121992.2-201ENST00000606262 256 ntBASIC3.62□□□□□ -1.83
ATP2A3Q93084 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.62□□□□□ -1.83
ATP2A3Q93084 AL359697.1-201ENST00000624879 587 ntBASIC3.62□□□□□ -1.83
ATP2A3Q93084 MIR3662-201ENST00000637030 95 ntBASIC3.62□□□□□ -1.83
ATP2A3Q93084 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATP2A3Q93084 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATP2A3Q93084 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.62□□□□□ -1.83
ATP2A3Q93084 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
ATP2A3Q93084 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ATP2A3Q93084 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ATP2A3Q93084 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ATP2A3Q93084 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.61□□□□□ -1.83
ATP2A3Q93084 SNORA38.1-201ENST00000364172 131 ntBASIC3.61□□□□□ -1.83
ATP2A3Q93084 Y_RNA.367-201ENST00000365544 101 ntBASIC3.61□□□□□ -1.83
ATP2A3Q93084 RNU4-48P-201ENST00000365559 182 ntBASIC3.61□□□□□ -1.83
ATP2A3Q93084 RNU6-877P-201ENST00000383868 107 ntBASIC3.61□□□□□ -1.83
ATP2A3Q93084 Y_RNA.509-201ENST00000384506 99 ntBASIC3.61□□□□□ -1.83
ATP2A3Q93084 RNU6-606P-201ENST00000384721 111 ntBASIC3.61□□□□□ -1.83
ATP2A3Q93084 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ATP2A3Q93084 RN7SKP111-201ENST00000410349 271 ntBASIC3.61□□□□□ -1.83
ATP2A3Q93084 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ATP2A3Q93084 RPL21P111-201ENST00000418453 477 ntBASIC3.61□□□□□ -1.83
ATP2A3Q93084 RAC1P6-201ENST00000423911 575 ntBASIC3.61□□□□□ -1.83
ATP2A3Q93084 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.61□□□□□ -1.83
ATP2A3Q93084 AL590664.1-201ENST00000448065 339 ntBASIC3.61□□□□□ -1.83
ATP2A3Q93084 HMGB3P8-201ENST00000449709 577 ntBASIC3.61□□□□□ -1.83
ATP2A3Q93084 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.61□□□□□ -1.83
ATP2A3Q93084 FDX1P2-201ENST00000450769 375 ntBASIC3.61□□□□□ -1.83
ATP2A3Q93084 RNU7-63P-201ENST00000459054 62 ntBASIC3.61□□□□□ -1.83
ATP2A3Q93084 AC126389.1-201ENST00000477436 290 ntBASIC3.61□□□□□ -1.83
ATP2A3Q93084 RN7SL432P-201ENST00000484057 298 ntBASIC3.61□□□□□ -1.83
ATP2A3Q93084 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.61□□□□□ -1.83
ATP2A3Q93084 AC018710.1-201ENST00000506509 158 ntBASIC3.61□□□□□ -1.83
ATP2A3Q93084 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.61□□□□□ -1.83
ATP2A3Q93084 SNORD27.1-201ENST00000516319 72 ntBASIC3.61□□□□□ -1.83
ATP2A3Q93084 RNU6-1092P-201ENST00000516955 87 ntBASIC3.61□□□□□ -1.83
ATP2A3Q93084 GLYCAM1-201ENST00000546596 285 ntBASIC3.61□□□□□ -1.83
ATP2A3Q93084 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.61□□□□□ -1.83
ATP2A3Q93084 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.61□□□□□ -1.83
ATP2A3Q93084 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.61□□□□□ -1.83
ATP2A3Q93084 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.61□□□□□ -1.83
ATP2A3Q93084 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms