Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 RNU6-1320P-201ENST00000390838 107 ntBASIC0.55□□□□□ -2.32
USP9XQ93008 RNU6-1269P-201ENST00000391139 107 ntBASIC0.55□□□□□ -2.32
USP9XQ93008 AC009302.1-201ENST00000417147 390 ntBASIC0.55□□□□□ -2.32
USP9XQ93008 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC0.55□□□□□ -2.32
USP9XQ93008 AL591043.1-201ENST00000432461 424 ntBASIC0.55□□□□□ -2.32
USP9XQ93008 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC0.55□□□□□ -2.32
USP9XQ93008 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
USP9XQ93008 RNU6-599P-201ENST00000459383 107 ntBASIC0.55□□□□□ -2.32
USP9XQ93008 RNU6-1193P-201ENST00000459461 107 ntBASIC0.55□□□□□ -2.32
USP9XQ93008 RNU4-77P-201ENST00000516692 156 ntBASIC0.55□□□□□ -2.32
USP9XQ93008 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC0.55□□□□□ -2.32
USP9XQ93008 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.55□□□□□ -2.32
USP9XQ93008 AC090953.1-201ENST00000604305 1092 ntBASIC0.55□□□□□ -2.32
USP9XQ93008 AL161734.1-201ENST00000609720 557 ntBASIC0.55□□□□□ -2.32
USP9XQ93008 RNU6-368P-201ENST00000620928 107 ntBASIC0.55□□□□□ -2.32
USP9XQ93008 RNU6-538P-201ENST00000622329 107 ntBASIC0.55□□□□□ -2.32
USP9XQ93008 AC073592.7-201ENST00000623659 507 ntBASIC0.55□□□□□ -2.32
USP9XQ93008 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
USP9XQ93008 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.55□□□□□ -2.32
USP9XQ93008 RPL23AP32-201ENST00000395315 459 ntBASIC0.54□□□□□ -2.32
USP9XQ93008 RPL31P52-201ENST00000407532 367 ntBASIC0.54□□□□□ -2.32
USP9XQ93008 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.54□□□□□ -2.32
USP9XQ93008 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.54□□□□□ -2.32
USP9XQ93008 CYCSP26-201ENST00000534107 320 ntBASIC0.54□□□□□ -2.32
USP9XQ93008 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.54□□□□□ -2.32
USP9XQ93008 CYP4A27P-201ENST00000567218 190 ntBASIC0.54□□□□□ -2.32
USP9XQ93008 AC123786.2-201ENST00000603459 275 ntBASIC0.54□□□□□ -2.32
USP9XQ93008 AC021646.1-201ENST00000605469 484 ntBASIC0.54□□□□□ -2.32
USP9XQ93008 RN7SKP61-201ENST00000410642 295 ntBASIC0.54□□□□□ -2.32
USP9XQ93008 XKRYP1-201ENST00000423438 492 ntBASIC0.54□□□□□ -2.32
USP9XQ93008 XKRYP2-201ENST00000432915 492 ntBASIC0.54□□□□□ -2.32
USP9XQ93008 AC005410.1-202ENST00000460347 485 ntBASIC0.54□□□□□ -2.32
USP9XQ93008 AC087045.1-201ENST00000605856 382 ntBASIC0.54□□□□□ -2.32
USP9XQ93008 AP001486.3-201ENST00000615334 372 ntBASIC0.54□□□□□ -2.32
USP9XQ93008 AC009318.3-201ENST00000616916 503 ntBASIC0.54□□□□□ -2.32
USP9XQ93008 AL157700.1-201ENST00000561973 1432 ntBASIC0.54□□□□□ -2.32
USP9XQ93008 MIR601-201ENST00000385256 79 ntBASIC0.53□□□□□ -2.32
USP9XQ93008 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
USP9XQ93008 AC010099.3-201ENST00000423896 409 ntBASIC0.53□□□□□ -2.32
USP9XQ93008 NAP1L4P3-201ENST00000432820 1147 ntBASIC0.53□□□□□ -2.32
USP9XQ93008 RPS25P9-201ENST00000435591 252 ntBASIC0.53□□□□□ -2.32
USP9XQ93008 AL357134.1-201ENST00000445848 426 ntBASIC0.53□□□□□ -2.32
USP9XQ93008 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC0.53□□□□□ -2.32
USP9XQ93008 OR5BM1P-201ENST00000512021 366 ntBASIC0.53□□□□□ -2.32
USP9XQ93008 RNU6-889P-201ENST00000517189 103 ntBASIC0.53□□□□□ -2.32
USP9XQ93008 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC0.53□□□□□ -2.32
USP9XQ93008 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.53□□□□□ -2.32
USP9XQ93008 UBE2L4-201ENST00000587688 464 ntBASIC0.53□□□□□ -2.32
USP9XQ93008 AL162373.1-201ENST00000620433 407 ntBASIC0.53□□□□□ -2.32
USP9XQ93008 CD24P4-201ENST00000382840 243 ntBASIC0.53□□□□□ -2.32
USP9XQ93008 RNU6-1184P-201ENST00000384588 108 ntBASIC0.53□□□□□ -2.32
USP9XQ93008 AL133384.1-201ENST00000412744 351 ntBASIC0.53□□□□□ -2.32
USP9XQ93008 AC241520.1-201ENST00000422654 1099 ntBASIC0.53□□□□□ -2.32
USP9XQ93008 RNU1-98P-201ENST00000458992 160 ntBASIC0.53□□□□□ -2.32
USP9XQ93008 AC098862.1-201ENST00000504991 413 ntBASIC0.53□□□□□ -2.32
USP9XQ93008 AC103851.1-201ENST00000506833 274 ntBASIC0.53□□□□□ -2.32
USP9XQ93008 SUB1P1-201ENST00000524415 382 ntBASIC0.53□□□□□ -2.32
USP9XQ93008 MIR378F-201ENST00000578143 78 ntBASIC0.53□□□□□ -2.32
USP9XQ93008 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC0.53□□□□□ -2.33
USP9XQ93008 AL356432.1-201ENST00000405809 419 ntBASIC0.52□□□□□ -2.33
USP9XQ93008 AL355497.1-201ENST00000406262 551 ntBASIC0.52□□□□□ -2.33
USP9XQ93008 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.52□□□□□ -2.33
USP9XQ93008 AC013268.2-201ENST00000420753 337 ntBASIC0.52□□□□□ -2.33
USP9XQ93008 RPL23AP95-201ENST00000426806 265 ntBASIC0.52□□□□□ -2.33
USP9XQ93008 MTND2P2-201ENST00000434633 945 ntBASIC0.52□□□□□ -2.33
USP9XQ93008 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.52□□□□□ -2.33
USP9XQ93008 AC104997.1-201ENST00000519761 717 ntBASIC0.52□□□□□ -2.33
USP9XQ93008 AC091932.3-201ENST00000624223 323 ntBASIC0.52□□□□□ -2.33
USP9XQ93008 RLIMP2-201ENST00000427891 1563 ntBASIC0.52□□□□□ -2.33
USP9XQ93008 CBX3P1-201ENST00000325243 554 ntBASIC0.52□□□□□ -2.33
USP9XQ93008 MIR101-1-201ENST00000362265 75 ntBASIC0.52□□□□□ -2.33
USP9XQ93008 SNORA14A-201ENST00000364773 135 ntBASIC0.52□□□□□ -2.33
USP9XQ93008 Y_RNA.293-201ENST00000364908 93 ntBASIC0.52□□□□□ -2.33
USP9XQ93008 Y_RNA.495-201ENST00000384435 112 ntBASIC0.52□□□□□ -2.33
USP9XQ93008 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
USP9XQ93008 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.52□□□□□ -2.33
USP9XQ93008 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.52□□□□□ -2.33
USP9XQ93008 AL355812.1-201ENST00000603215 216 ntBASIC0.52□□□□□ -2.33
USP9XQ93008 AC109809.1-201ENST00000619665 545 ntBASIC0.52□□□□□ -2.33
USP9XQ93008 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
USP9XQ93008 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
USP9XQ93008 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC0.51□□□□□ -2.33
USP9XQ93008 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC0.51□□□□□ -2.33
USP9XQ93008 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.51□□□□□ -2.33
USP9XQ93008 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC0.51□□□□□ -2.33
USP9XQ93008 OR6C72P-201ENST00000451403 892 ntBASIC0.51□□□□□ -2.33
USP9XQ93008 EIF4EP3-201ENST00000498782 656 ntBASIC0.51□□□□□ -2.33
USP9XQ93008 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.51□□□□□ -2.33
USP9XQ93008 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC0.51□□□□□ -2.33
USP9XQ93008 AC004987.4-201ENST00000603383 338 ntBASIC0.51□□□□□ -2.33
USP9XQ93008 MIR6130-201ENST00000619419 109 ntBASIC0.51□□□□□ -2.33
USP9XQ93008 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.51□□□□□ -2.33
USP9XQ93008 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
USP9XQ93008 RNA5SP105-201ENST00000391123 113 ntBASIC0.51□□□□□ -2.33
USP9XQ93008 CIR1P3-201ENST00000405137 479 ntBASIC0.51□□□□□ -2.33
USP9XQ93008 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC0.51□□□□□ -2.33
USP9XQ93008 RPL31P60-201ENST00000478450 367 ntBASIC0.51□□□□□ -2.33
USP9XQ93008 AC020699.1-201ENST00000505161 445 ntBASIC0.51□□□□□ -2.33
USP9XQ93008 OR5B19P-201ENST00000531766 928 ntBASIC0.51□□□□□ -2.33
USP9XQ93008 AL160236.1-201ENST00000556317 195 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms