Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.78□□□□□ -2.12
TOPBP1Q92547 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
TOPBP1Q92547 RNU6-234P-201ENST00000365229 104 ntBASIC1.77□□□□□ -2.13
TOPBP1Q92547 MIR532-201ENST00000385025 91 ntBASIC1.77□□□□□ -2.13
TOPBP1Q92547 AL355497.1-201ENST00000406262 551 ntBASIC1.77□□□□□ -2.13
TOPBP1Q92547 AL591212.2-201ENST00000433923 257 ntBASIC1.77□□□□□ -2.13
TOPBP1Q92547 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.77□□□□□ -2.13
TOPBP1Q92547 RPS15AP27-201ENST00000449183 343 ntBASIC1.77□□□□□ -2.13
TOPBP1Q92547 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.77□□□□□ -2.13
TOPBP1Q92547 RNA5SP233-201ENST00000459153 113 ntBASIC1.77□□□□□ -2.13
TOPBP1Q92547 RNU6-1132P-201ENST00000459214 107 ntBASIC1.77□□□□□ -2.13
TOPBP1Q92547 RPL7P18-201ENST00000478965 734 ntBASIC1.77□□□□□ -2.13
TOPBP1Q92547 RPS27P21-201ENST00000486977 252 ntBASIC1.77□□□□□ -2.13
TOPBP1Q92547 IGJP1-201ENST00000522682 475 ntBASIC1.77□□□□□ -2.13
TOPBP1Q92547 OR5AK1P-201ENST00000524837 922 ntBASIC1.77□□□□□ -2.13
TOPBP1Q92547 AL138976.2-201ENST00000563989 694 ntBASIC1.77□□□□□ -2.13
TOPBP1Q92547 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
TOPBP1Q92547 AC245884.12-201ENST00000615364 59 ntBASIC1.77□□□□□ -2.13
TOPBP1Q92547 CR848007.1-201ENST00000442354 1699 ntBASIC1.77□□□□□ -2.13
TOPBP1Q92547 RNU6-251P-201ENST00000363235 104 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 RNA5SP62-201ENST00000363457 110 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 RNU6-1072P-201ENST00000384703 107 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 RNU6-443P-201ENST00000384780 107 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 RNU2-15P-201ENST00000410692 191 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 MTND4LP7-201ENST00000431728 294 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 AC005345.1-201ENST00000431868 217 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 AL714022.1-201ENST00000439897 151 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.76□□□□□ -2.13
TOPBP1Q92547 AC116337.2-201ENST00000477662 156 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.76□□□□□ -2.13
TOPBP1Q92547 AC147055.4-201ENST00000504399 745 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 MIR514B-201ENST00000516774 80 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.76□□□□□ -2.13
TOPBP1Q92547 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.76□□□□□ -2.13
TOPBP1Q92547 SULT1C2P1-202ENST00000562418 459 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TOPBP1Q92547 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
TOPBP1Q92547 SNORD51-201ENST00000384320 80 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 U3.20-201ENST00000390909 217 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 CYCSP48-201ENST00000417124 323 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 COX6CP18-201ENST00000448769 222 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 MTND5P8-201ENST00000449817 1083 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
TOPBP1Q92547 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.76□□□□□ -2.13
TOPBP1Q92547 AC021382.1-201ENST00000483523 359 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 RPS23P4-201ENST00000487908 423 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.76□□□□□ -2.13
TOPBP1Q92547 AC108078.1-201ENST00000508073 725 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 RNU2-44P-201ENST00000516795 194 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 SNORA31.23-201ENST00000517219 133 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.76□□□□□ -2.13
TOPBP1Q92547 HMGB1P14-201ENST00000557424 591 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.76□□□□□ -2.13
TOPBP1Q92547 ADAM3B-201ENST00000569937 840 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 MIR3921-201ENST00000577308 85 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 MIR4714-201ENST00000580728 77 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
TOPBP1Q92547 AC004852.3-201ENST00000614131 326 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 AC079395.3-201ENST00000615161 484 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 AL356585.4-201ENST00000623078 1229 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 AC097655.1-201ENST00000635075 318 ntBASIC1.76□□□□□ -2.13
TOPBP1Q92547 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
TOPBP1Q92547 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TOPBP1Q92547 SNORA68.1-201ENST00000364537 132 ntBASIC1.75□□□□□ -2.13
TOPBP1Q92547 RPL7P27-201ENST00000403775 720 ntBASIC1.75□□□□□ -2.13
TOPBP1Q92547 AL355615.1-201ENST00000406187 641 ntBASIC1.75□□□□□ -2.13
TOPBP1Q92547 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.75□□□□□ -2.13
TOPBP1Q92547 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.75□□□□□ -2.13
TOPBP1Q92547 MTND4LP14-201ENST00000429447 288 ntBASIC1.75□□□□□ -2.13
TOPBP1Q92547 AC024082.2-201ENST00000434771 238 ntBASIC1.75□□□□□ -2.13
TOPBP1Q92547 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.75□□□□□ -2.13
TOPBP1Q92547 THAP5P1-201ENST00000439089 262 ntBASIC1.75□□□□□ -2.13
TOPBP1Q92547 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.75□□□□□ -2.13
TOPBP1Q92547 AL592447.1-201ENST00000447592 540 ntBASIC1.75□□□□□ -2.13
TOPBP1Q92547 AC079776.3-201ENST00000450665 370 ntBASIC1.75□□□□□ -2.13
TOPBP1Q92547 NDUFA5P7-201ENST00000452914 242 ntBASIC1.75□□□□□ -2.13
TOPBP1Q92547 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.75□□□□□ -2.13
TOPBP1Q92547 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.75□□□□□ -2.13
TOPBP1Q92547 AL135752.1-201ENST00000479477 471 ntBASIC1.75□□□□□ -2.13
TOPBP1Q92547 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.75□□□□□ -2.13
TOPBP1Q92547 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.75□□□□□ -2.13
TOPBP1Q92547 RNU6-928P-201ENST00000516876 104 ntBASIC1.75□□□□□ -2.13
TOPBP1Q92547 RNU6-798P-201ENST00000516912 103 ntBASIC1.75□□□□□ -2.13
TOPBP1Q92547 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.75□□□□□ -2.13
TOPBP1Q92547 CYCSP26-201ENST00000534107 320 ntBASIC1.75□□□□□ -2.13
TOPBP1Q92547 AC090888.1-201ENST00000561335 1141 ntBASIC1.75□□□□□ -2.13
TOPBP1Q92547 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.75□□□□□ -2.13
TOPBP1Q92547 AC015688.2-201ENST00000584523 262 ntBASIC1.75□□□□□ -2.13
TOPBP1Q92547 AC005498.1-201ENST00000592125 465 ntBASIC1.75□□□□□ -2.13
TOPBP1Q92547 AP000254.1-201ENST00000609934 520 ntBASIC1.75□□□□□ -2.13
TOPBP1Q92547 RMST_10.1-201ENST00000616309 154 ntBASIC1.75□□□□□ -2.13
TOPBP1Q92547 GDI2P1-201ENST00000429312 1336 ntBASIC1.75□□□□□ -2.13
TOPBP1Q92547 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
TOPBP1Q92547 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
TOPBP1Q92547 RNU6-1155P-201ENST00000363554 107 ntBASIC1.74□□□□□ -2.13
TOPBP1Q92547 RNU6-270P-201ENST00000364131 105 ntBASIC1.74□□□□□ -2.13
TOPBP1Q92547 RNU6-115P-201ENST00000364310 107 ntBASIC1.74□□□□□ -2.13
TOPBP1Q92547 RNU4-72P-201ENST00000410754 173 ntBASIC1.74□□□□□ -2.13
TOPBP1Q92547 BEND7P1-201ENST00000422058 457 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms