Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 OR5BM1P-201ENST00000512021 366 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 PDCL2P2-201ENST00000533651 189 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 Y_RNA.6-201ENST00000362350 114 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 SNORD3E-201ENST00000362899 217 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 RNU6-141P-201ENST00000410499 105 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 AC025465.4-201ENST00000513422 638 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 RNU6-732P-201ENST00000516033 103 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 RNU6-118P-201ENST00000516552 102 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 AL158801.5-201ENST00000623123 465 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 MIR1246-201ENST00000636535 73 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 RNU6-152P-201ENST00000384037 107 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 Y_RNA.529-201ENST00000384586 119 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 RNU2-25P-201ENST00000411041 191 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 ARL2BPP3-201ENST00000421226 480 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 SETP10-201ENST00000424368 814 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 MTND2P24-201ENST00000453434 806 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 HMGB1P28-201ENST00000507778 552 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 Y_RNA.657-201ENST00000515983 102 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 AP001033.2-201ENST00000609701 1003 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 AC243829.6-201ENST00000612652 106 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 RNA5SP160-201ENST00000364866 120 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 RNU6-46P-201ENST00000383860 107 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 RNU6-756P-201ENST00000383997 107 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 Y_RNA.443-201ENST00000384135 111 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 RNU6-1133P-201ENST00000410963 100 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 RPL23AP95-201ENST00000426806 265 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 HSFY3P-201ENST00000444242 1191 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 SNORD124-201ENST00000459577 104 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 RNA5SP180-201ENST00000516181 101 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 SNORA31.25-201ENST00000517242 134 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 BNIP3P39-201ENST00000601077 554 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 AC012507.3-201ENST00000603556 477 ntBASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC0.44□□□□□ -2.34
SYNE2Q8WXH0 RNU4-67P-201ENST00000364569 141 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 MTND4P13-201ENST00000402078 1023 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 Z85995.1-201ENST00000415547 335 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 RNA5SP484-201ENST00000458857 111 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 AC104435.1-201ENST00000483483 166 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 AP004607.1-201ENST00000524456 203 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 AC004817.2-201ENST00000561794 651 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 AL022578.1-201ENST00000439330 1433 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 OR4G2P-201ENST00000328113 903 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 RNU6-230P-201ENST00000362457 104 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 RNU6-179P-201ENST00000363350 107 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 RNU6-1327P-201ENST00000365302 105 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 MT-TL1-201ENST00000386347 75 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 AL031577.2-201ENST00000404133 280 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 MTCYBP8-201ENST00000422855 651 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 GTF2IP7-202ENST00000436677 309 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 AC007969.2-201ENST00000441891 191 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 Y_RNA.653-201ENST00000459091 95 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 SCARNA21.1-201ENST00000515996 128 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 AL157871.3-201ENST00000557231 293 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 OR4G3P-201ENST00000633500 913 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 Y_RNA.71-201ENST00000362892 104 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 RNU6-1097P-201ENST00000363586 107 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 MOB4-205ENST00000409916 829 ntTSL 3 BASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 NEK4P1-201ENST00000433383 879 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 AC114982.2-201ENST00000461396 358 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 KLRA1P-201ENST00000503499 986 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 AC093852.1-201ENST00000503587 266 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 AC090821.2-201ENST00000523552 176 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 MTCO3P13-201ENST00000577757 781 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 AC245014.2-201ENST00000603689 287 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 AC246785.4-201ENST00000605374 287 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 SNORD49B-201ENST00000365172 72 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 AL031779.1-201ENST00000415663 330 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 AC099336.2-201ENST00000422457 254 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.43□□□□□ -2.34
SYNE2Q8WXH0 SNRPGP13-201ENST00000442212 177 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms