Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 AL356010.1-201ENST00000456364 102 ntBASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 AC087588.1-201ENST00000462203 316 ntBASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 RPS26P21-201ENST00000475397 348 ntBASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 RN7SL20P-201ENST00000488827 297 ntBASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 Y_RNA.693-201ENST00000516641 110 ntBASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 RN7SKP282-201ENST00000516824 299 ntBASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 AC008962.1-201ENST00000605729 304 ntBASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 AL365204.3-201ENST00000612448 685 ntBASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 AC068831.7-201ENST00000616954 363 ntBASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 AC139792.3-201ENST00000623525 224 ntBASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 AC093648.1-201ENST00000623546 606 ntBASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 AL049781.1-201ENST00000623195 3585 ntBASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 MTND5P1-201ENST00000445440 1375 ntBASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 ZNF680P1-201ENST00000436625 1469 ntBASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 Y_RNA.9-201ENST00000362354 101 ntBASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 RNU6-1322P-201ENST00000364309 107 ntBASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 RNU4-48P-201ENST00000365559 182 ntBASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 RNU6-946P-201ENST00000383878 107 ntBASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 RNU6-14P-201ENST00000384630 106 ntBASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 Y_RNA.554-201ENST00000384672 102 ntBASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 MIR548F1-201ENST00000408667 84 ntBASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 OR51A5P-201ENST00000415429 942 ntBASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 Z85995.1-201ENST00000415547 335 ntBASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 TAAR7P-201ENST00000436141 242 ntBASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 MTATP6P13-201ENST00000438531 667 ntBASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 NEFMP1-201ENST00000443423 1006 ntBASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 MRPS17P3-201ENST00000465453 385 ntBASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 AC026427.2-201ENST00000506228 536 ntBASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 RNU6-1256P-201ENST00000516539 103 ntBASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 AC022690.1-201ENST00000526681 550 ntBASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 AC104383.1-201ENST00000530297 370 ntBASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 AC011611.1-201ENST00000552179 197 ntBASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 AL157687.1-201ENST00000554853 619 ntBASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 AC024619.4-201ENST00000580924 316 ntBASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 MTATP6P3-201ENST00000581686 676 ntBASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 Z84480.1-201ENST00000605131 311 ntBASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 AC007619.2-201ENST00000605743 379 ntBASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 AL589994.2-201ENST00000621124 579 ntBASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SLC44A1Q8WWI5 ZNF807-201ENST00000328088 1707 ntBASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 RNU1-33P-201ENST00000364249 162 ntBASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 MIR493-201ENST00000385254 89 ntBASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 RNA5SP274-201ENST00000410484 108 ntBASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 RNU6-387P-201ENST00000411331 105 ntBASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 AL158156.1-201ENST00000422509 473 ntBASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 CBWD4P-201ENST00000445695 655 ntBASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 FGF7P6-202ENST00000451282 293 ntBASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 AC027673.1-201ENST00000456245 405 ntBASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 BX510359.1-201ENST00000456973 237 ntBASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 RNA5SP310-201ENST00000459084 116 ntBASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 RPL31P60-201ENST00000478450 367 ntBASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 AP004217.1-201ENST00000480579 346 ntBASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.1□□□□□ -1.91
SLC44A1Q8WWI5 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms