Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 AC022164.1-201ENST00000568767 2673 ntBASIC5.13□□□□□ -1.59
SNIP1Q8TAD8 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.13□□□□□ -1.59
SNIP1Q8TAD8 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SNIP1Q8TAD8 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC5.13□□□□□ -1.59
SNIP1Q8TAD8 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
SNIP1Q8TAD8 AF127577.6-201ENST00000623352 2191 ntBASIC5.12□□□□□ -1.59
SNIP1Q8TAD8 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNIP1Q8TAD8 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNIP1Q8TAD8 snoU2_19.4-201ENST00000364329 80 ntBASIC5.12□□□□□ -1.59
SNIP1Q8TAD8 RNU6-1180P-201ENST00000364935 107 ntBASIC5.12□□□□□ -1.59
SNIP1Q8TAD8 RNU6-882P-201ENST00000391025 103 ntBASIC5.12□□□□□ -1.59
SNIP1Q8TAD8 RNU6-1248P-201ENST00000391096 64 ntBASIC5.12□□□□□ -1.59
SNIP1Q8TAD8 RNU6-712P-201ENST00000410558 100 ntBASIC5.12□□□□□ -1.59
SNIP1Q8TAD8 COX6B1P1-201ENST00000415962 213 ntBASIC5.12□□□□□ -1.59
SNIP1Q8TAD8 AL158823.1-201ENST00000418441 478 ntBASIC5.12□□□□□ -1.59
SNIP1Q8TAD8 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.12□□□□□ -1.59
SNIP1Q8TAD8 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC5.12□□□□□ -1.59
SNIP1Q8TAD8 AC020593.1-201ENST00000507399 299 ntBASIC5.12□□□□□ -1.59
SNIP1Q8TAD8 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.12□□□□□ -1.59
SNIP1Q8TAD8 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.12□□□□□ -1.59
SNIP1Q8TAD8 NDUFA5P6-201ENST00000542110 379 ntBASIC5.12□□□□□ -1.59
SNIP1Q8TAD8 NACAP3-201ENST00000552100 481 ntBASIC5.12□□□□□ -1.59
SNIP1Q8TAD8 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.12□□□□□ -1.59
SNIP1Q8TAD8 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.12□□□□□ -1.59
SNIP1Q8TAD8 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC5.12□□□□□ -1.59
SNIP1Q8TAD8 snoZ196.1-201ENST00000625269 89 ntBASIC5.12□□□□□ -1.59
SNIP1Q8TAD8 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.12□□□□□ -1.59
SNIP1Q8TAD8 MIR3914-2-201ENST00000637339 95 ntBASIC5.12□□□□□ -1.59
SNIP1Q8TAD8 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SNIP1Q8TAD8 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SNIP1Q8TAD8 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.12□□□□□ -1.59
SNIP1Q8TAD8 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.12□□□□□ -1.59
SNIP1Q8TAD8 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.12□□□□□ -1.59
SNIP1Q8TAD8 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.12□□□□□ -1.59
SNIP1Q8TAD8 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 MFSD8-239ENST00000641590 2479 ntBASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 RNU6-78P-201ENST00000362897 107 ntBASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 RNU1-32P-201ENST00000363937 159 ntBASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 SNORA62-201ENST00000365493 153 ntBASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 RNA5SP187-201ENST00000384400 119 ntBASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 Y_RNA.495-201ENST00000384435 112 ntBASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 MIR487A-201ENST00000385009 80 ntBASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 RNU6-763P-201ENST00000390865 106 ntBASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 EIF1AXP1-201ENST00000419267 435 ntBASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 BPY2DP-201ENST00000422208 265 ntBASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 IGHV5-78-201ENST00000450948 295 ntBASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 AC087385.3-201ENST00000620477 187 ntBASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SNIP1Q8TAD8 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 SNURFL-201ENST00000309296 343 ntBASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 SNORA29-201ENST00000384183 140 ntBASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 U8.10-201ENST00000384260 133 ntBASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 SNORA16A-201ENST00000384342 137 ntBASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 AC010095.1-201ENST00000443543 144 ntBASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 AC124916.1-201ENST00000444020 547 ntBASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 snoU109.2-201ENST00000459316 135 ntBASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 AC009127.1-201ENST00000467090 155 ntBASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 RPL36AP41-201ENST00000493820 306 ntBASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 RNU6-58P-201ENST00000517143 103 ntBASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 AC002545.1-201ENST00000592511 181 ntBASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 AC006115.2-201ENST00000596823 202 ntBASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 AC241585.2-209ENST00000638217 143 ntBASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNIP1Q8TAD8 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms