Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 U2.2-201ENST00000616535 191 ntBASIC2.29□□□□□ -2.04
CCDC148Q8NFR7 U2.3-201ENST00000617785 191 ntBASIC2.29□□□□□ -2.04
CCDC148Q8NFR7 U2.19-201ENST00000618602 191 ntBASIC2.29□□□□□ -2.04
CCDC148Q8NFR7 RNU2-1-201ENST00000618664 191 ntBASIC2.29□□□□□ -2.04
CCDC148Q8NFR7 U2.6-201ENST00000619225 191 ntBASIC2.29□□□□□ -2.04
CCDC148Q8NFR7 U2.5-201ENST00000619465 191 ntBASIC2.29□□□□□ -2.04
CCDC148Q8NFR7 U2.10-201ENST00000620268 191 ntBASIC2.29□□□□□ -2.04
CCDC148Q8NFR7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC148Q8NFR7 AC104985.3-201ENST00000623479 597 ntBASIC2.29□□□□□ -2.04
CCDC148Q8NFR7 AC099063.3-201ENST00000642066 185 ntBASIC2.29□□□□□ -2.04
CCDC148Q8NFR7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CCDC148Q8NFR7 RNU6-744P-201ENST00000365557 107 ntBASIC2.28□□□□□ -2.04
CCDC148Q8NFR7 RNU6-1316P-201ENST00000384242 108 ntBASIC2.28□□□□□ -2.04
CCDC148Q8NFR7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CCDC148Q8NFR7 UBE2FP1-201ENST00000416536 447 ntBASIC2.28□□□□□ -2.04
CCDC148Q8NFR7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC148Q8NFR7 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC148Q8NFR7 USP9YP26-201ENST00000421008 661 ntBASIC2.28□□□□□ -2.04
CCDC148Q8NFR7 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC148Q8NFR7 SKA2P1-201ENST00000425592 390 ntBASIC2.28□□□□□ -2.04
CCDC148Q8NFR7 AC093106.2-201ENST00000428212 385 ntBASIC2.28□□□□□ -2.04
CCDC148Q8NFR7 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC148Q8NFR7 MTND1P28-201ENST00000435623 950 ntBASIC2.28□□□□□ -2.04
CCDC148Q8NFR7 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC148Q8NFR7 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC148Q8NFR7 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC148Q8NFR7 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC148Q8NFR7 AC093752.1-206ENST00000511823 336 ntBASIC2.28□□□□□ -2.04
CCDC148Q8NFR7 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
CCDC148Q8NFR7 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC148Q8NFR7 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC148Q8NFR7 AC090186.1-201ENST00000605991 572 ntBASIC2.28□□□□□ -2.04
CCDC148Q8NFR7 SDR42E1P4-201ENST00000620894 481 ntBASIC2.28□□□□□ -2.04
CCDC148Q8NFR7 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC148Q8NFR7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CCDC148Q8NFR7 AL359851.1-201ENST00000569460 4997 ntBASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 RNU6-621P-201ENST00000364752 109 ntBASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 SNORA46.1-201ENST00000391069 153 ntBASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 AL079342.1-201ENST00000401460 267 ntBASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 RNU4-26P-201ENST00000410270 107 ntBASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 AC003685.2-201ENST00000422795 395 ntBASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 USP9YP11-201ENST00000427537 717 ntBASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 NANOGP2-201ENST00000435391 727 ntBASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 AC020550.1-201ENST00000447385 163 ntBASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 AC090515.1-201ENST00000465295 476 ntBASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 RPS15AP36-201ENST00000492022 382 ntBASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 RPL38P4-201ENST00000502376 214 ntBASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 AC092436.1-201ENST00000506450 503 ntBASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 RNU6-467P-201ENST00000517027 110 ntBASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 AC118273.2-201ENST00000532092 465 ntBASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 MTND3P13-201ENST00000574391 343 ntBASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 MIR3945-201ENST00000581853 98 ntBASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 AC105245.1-201ENST00000581934 244 ntBASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 AL158163.2-201ENST00000619110 700 ntBASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 AC244517.12-201ENST00000623581 663 ntBASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 AC079416.3-201ENST00000624479 549 ntBASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 AP003400.5-201ENST00000624827 617 ntBASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.27□□□□□ -2.05
CCDC148Q8NFR7 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.26□□□□□ -2.05
CCDC148Q8NFR7 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC148Q8NFR7 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC148Q8NFR7 RNU6-560P-201ENST00000364007 108 ntBASIC2.26□□□□□ -2.05
CCDC148Q8NFR7 RNU6-298P-201ENST00000390888 96 ntBASIC2.26□□□□□ -2.05
CCDC148Q8NFR7 U6atac.2-201ENST00000408644 118 ntBASIC2.26□□□□□ -2.05
CCDC148Q8NFR7 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.26□□□□□ -2.05
CCDC148Q8NFR7 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC148Q8NFR7 BX276092.3-201ENST00000424182 230 ntBASIC2.26□□□□□ -2.05
CCDC148Q8NFR7 RPS3AP44-201ENST00000425466 790 ntBASIC2.26□□□□□ -2.05
CCDC148Q8NFR7 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC148Q8NFR7 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC148Q8NFR7 RNA5SP233-201ENST00000459153 113 ntBASIC2.26□□□□□ -2.05
CCDC148Q8NFR7 RN7SL429P-201ENST00000479090 223 ntBASIC2.26□□□□□ -2.05
CCDC148Q8NFR7 RN7SL489P-201ENST00000486185 223 ntBASIC2.26□□□□□ -2.05
CCDC148Q8NFR7 RN7SL327P-201ENST00000488659 223 ntBASIC2.26□□□□□ -2.05
CCDC148Q8NFR7 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.26□□□□□ -2.05
CCDC148Q8NFR7 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC148Q8NFR7 AC008837.2-201ENST00000513076 418 ntBASIC2.26□□□□□ -2.05
CCDC148Q8NFR7 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.26□□□□□ -2.05
CCDC148Q8NFR7 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.26□□□□□ -2.05
CCDC148Q8NFR7 AC023538.1-201ENST00000534576 736 ntBASIC2.26□□□□□ -2.05
CCDC148Q8NFR7 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC148Q8NFR7 MIR5089-201ENST00000580047 84 ntBASIC2.26□□□□□ -2.05
CCDC148Q8NFR7 MIR4765-201ENST00000585007 77 ntBASIC2.26□□□□□ -2.05
CCDC148Q8NFR7 AL355598.1-201ENST00000604169 202 ntBASIC2.26□□□□□ -2.05
CCDC148Q8NFR7 uc_338.14-201ENST00000613162 166 ntBASIC2.26□□□□□ -2.05
CCDC148Q8NFR7 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
CCDC148Q8NFR7 RN7SL853P-201ENST00000617250 223 ntBASIC2.26□□□□□ -2.05
CCDC148Q8NFR7 U4atac.1-201ENST00000618345 95 ntBASIC2.26□□□□□ -2.05
CCDC148Q8NFR7 AL162373.1-201ENST00000620433 407 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms