Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RNU6-378P-201ENST00000384324 107 ntBASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 RNU6-843P-201ENST00000384454 104 ntBASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 RNU6-658P-201ENST00000384606 106 ntBASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 MIR325-201ENST00000385260 98 ntBASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 HMGN2P30-201ENST00000423237 256 ntBASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 AL031659.1-201ENST00000447075 539 ntBASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 HSPE1P25-201ENST00000455484 251 ntBASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 Y_RNA.644-201ENST00000459006 113 ntBASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 RN7SL51P-201ENST00000468230 285 ntBASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 AC083982.1-201ENST00000485679 344 ntBASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 RPL30P1-201ENST00000488676 339 ntBASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 Y_RNA.674-201ENST00000516362 113 ntBASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 SCARNA24.2-201ENST00000516968 130 ntBASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 RN7SKP272-201ENST00000516988 232 ntBASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 H3F3AP1-201ENST00000559984 334 ntBASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 AC025574.2-201ENST00000615621 514 ntBASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 MIR6134-201ENST00000617606 109 ntBASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 OR56B2P-202ENST00000641377 2453 ntBASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 RNA5SP319-201ENST00000362768 119 ntBASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 RNA5SP132-201ENST00000364725 118 ntBASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 UBBP2-201ENST00000376781 231 ntBASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 RNU1-73P-201ENST00000383971 164 ntBASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 RNU6-746P-201ENST00000384112 109 ntBASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 RNU6-318P-201ENST00000384283 103 ntBASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 MIR32-201ENST00000384965 70 ntBASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 RPS4XP3-201ENST00000398541 413 ntBASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 RNA5SP44-201ENST00000410446 133 ntBASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 Y_RNA.793-201ENST00000411222 111 ntBASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 AC011742.1-201ENST00000431448 434 ntBASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 GSTM5P1-201ENST00000434751 660 ntBASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 RNA5SP103-201ENST00000459503 118 ntBASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 RPS23P6-201ENST00000466136 431 ntBASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 OR2AO1P-201ENST00000476497 403 ntBASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 AF186996.7-201ENST00000492781 209 ntBASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 SEPT14P8-201ENST00000508026 178 ntBASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 AC005921.1-201ENST00000510589 286 ntBASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 RNA5SP34-201ENST00000516887 130 ntBASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 CBX3P4-201ENST00000538909 354 ntBASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 HSPE1P5-201ENST00000561489 272 ntBASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 SNORD113-5-201ENST00000607261 78 ntBASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 AC011476.5-201ENST00000615594 130 ntBASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 AC018445.2-201ENST00000622987 260 ntBASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 CU639417.4-201ENST00000623928 207 ntBASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 AL450345.1-202ENST00000605741 3881 ntBASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.93□□□□□ -1.62
DEPDC4Q8N2C3 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 AC018529.3-201ENST00000624212 2254 ntBASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 RN7SKP124-201ENST00000364730 341 ntBASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 SNORD32A-201ENST00000364805 84 ntBASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 RNU6-326P-201ENST00000365480 107 ntBASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 RNU6-898P-201ENST00000365627 104 ntBASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 Y_RNA.504-201ENST00000384481 104 ntBASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 MIR551A-201ENST00000385042 96 ntBASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 MIR493-201ENST00000385254 89 ntBASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 SNORA53-201ENST00000391141 249 ntBASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 MIR888-201ENST00000401186 77 ntBASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 RNU2-20P-201ENST00000410425 191 ntBASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 OR4C10P-201ENST00000434991 931 ntBASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 AC087477.1-201ENST00000465747 340 ntBASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 COX6CP14-201ENST00000469580 174 ntBASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 AC097462.2-201ENST00000504623 481 ntBASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 AC093840.1-201ENST00000511599 336 ntBASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 BNIP3P1-201ENST00000547295 580 ntBASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 AK6P2-201ENST00000549020 471 ntBASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 CR383656.8-201ENST00000549046 145 ntBASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 AL390726.5-202ENST00000564800 256 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms