Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC006445.1-201ENST00000491925 405 ntBASIC4.17□□□□□ -1.74
SYNE4Q8N205 COX7A2P2-201ENST00000505291 250 ntBASIC4.17□□□□□ -1.74
SYNE4Q8N205 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.17□□□□□ -1.74
SYNE4Q8N205 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.17□□□□□ -1.74
SYNE4Q8N205 BNIP3P6-201ENST00000549284 499 ntBASIC4.17□□□□□ -1.74
SYNE4Q8N205 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.17□□□□□ -1.74
SYNE4Q8N205 AL121576.1-201ENST00000556055 276 ntBASIC4.17□□□□□ -1.74
SYNE4Q8N205 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.17□□□□□ -1.74
SYNE4Q8N205 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.17□□□□□ -1.74
SYNE4Q8N205 MIR4458-201ENST00000578872 75 ntBASIC4.17□□□□□ -1.74
SYNE4Q8N205 AC006504.6-201ENST00000590142 199 ntBASIC4.17□□□□□ -1.74
SYNE4Q8N205 MIR486-1-201ENST00000612171 68 ntBASIC4.17□□□□□ -1.74
SYNE4Q8N205 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.17□□□□□ -1.74
SYNE4Q8N205 MIR6715B-201ENST00000637172 77 ntBASIC4.17□□□□□ -1.74
SYNE4Q8N205 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.17□□□□□ -1.74
SYNE4Q8N205 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SYNE4Q8N205 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SYNE4Q8N205 AC004972.1-201ENST00000623934 2209 ntBASIC4.17□□□□□ -1.74
SYNE4Q8N205 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SYNE4Q8N205 AL592437.2-201ENST00000421655 2434 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SYNE4Q8N205 AC073343.1-201ENST00000328239 651 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 RNU6-552P-201ENST00000362869 119 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
SYNE4Q8N205 SNORD51-201ENST00000384320 80 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 MIR153-1-201ENST00000384914 90 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 U3.20-201ENST00000390909 217 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 RNA5SP56-201ENST00000410277 118 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.16□□□□□ -1.74
SYNE4Q8N205 AL158071.1-201ENST00000430315 461 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 MRPS18BP2-201ENST00000434310 759 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 RPS29P31-201ENST00000446147 164 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.16□□□□□ -1.74
SYNE4Q8N205 Y_RNA.631-201ENST00000459607 101 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 AL163540.1-201ENST00000485382 386 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 AC097462.2-201ENST00000504623 481 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 AC021146.2-201ENST00000504736 556 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.16□□□□□ -1.74
SYNE4Q8N205 RNU6-1088P-201ENST00000516850 104 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.16□□□□□ -1.74
SYNE4Q8N205 COPS8P3-201ENST00000526024 482 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 AC109635.4-202ENST00000531666 412 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 AL355836.1-201ENST00000555951 870 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 MIR4672-201ENST00000583126 81 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 AL669831.4-202ENST00000590817 238 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 AC020914.4-201ENST00000597690 277 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 AC008737.2-201ENST00000599446 118 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 KC877982.1-201ENST00000602313 470 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 AC006023.1-201ENST00000603944 259 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 AL670379.11-201ENST00000604059 253 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 AL670379.10-201ENST00000604330 253 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 APOOP1-201ENST00000604695 592 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 AL670379.12-201ENST00000605291 253 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 AC080078.3-201ENST00000605407 463 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 AL670379.9-201ENST00000605428 253 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 AL080274.1-201ENST00000605565 220 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 AC245517.5-201ENST00000611529 162 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
SYNE4Q8N205 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.16□□□□□ -1.74
SYNE4Q8N205 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SYNE4Q8N205 AC011460.1-201ENST00000636268 1834 ntBASIC4.16□□□□□ -1.74
SYNE4Q8N205 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SYNE4Q8N205 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
SYNE4Q8N205 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.15□□□□□ -1.74
SYNE4Q8N205 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SYNE4Q8N205 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.15□□□□□ -1.74
SYNE4Q8N205 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SYNE4Q8N205 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
SYNE4Q8N205 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.15□□□□□ -1.74
SYNE4Q8N205 MIR449A-201ENST00000362113 91 ntBASIC4.15□□□□□ -1.75
SYNE4Q8N205 RNA5SP502-201ENST00000362694 119 ntBASIC4.15□□□□□ -1.75
SYNE4Q8N205 RNU4-66P-201ENST00000365199 138 ntBASIC4.15□□□□□ -1.75
SYNE4Q8N205 Y_RNA.339-201ENST00000365325 102 ntBASIC4.15□□□□□ -1.75
SYNE4Q8N205 RNU2-62P-201ENST00000410868 191 ntBASIC4.15□□□□□ -1.75
SYNE4Q8N205 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.15□□□□□ -1.75
SYNE4Q8N205 AC006989.1-201ENST00000427212 131 ntBASIC4.15□□□□□ -1.75
SYNE4Q8N205 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.15□□□□□ -1.75
SYNE4Q8N205 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.15□□□□□ -1.75
SYNE4Q8N205 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.15□□□□□ -1.75
SYNE4Q8N205 AL590399.6-201ENST00000446396 307 ntBASIC4.15□□□□□ -1.75
SYNE4Q8N205 AC020550.1-201ENST00000447385 163 ntBASIC4.15□□□□□ -1.75
SYNE4Q8N205 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.15□□□□□ -1.75
SYNE4Q8N205 AL162395.1-201ENST00000457882 422 ntBASIC4.15□□□□□ -1.75
SYNE4Q8N205 HMGB1P25-201ENST00000468402 607 ntBASIC4.15□□□□□ -1.75
SYNE4Q8N205 KC877373.1-201ENST00000479066 408 ntBASIC4.15□□□□□ -1.75
SYNE4Q8N205 AC012181.1-201ENST00000479895 423 ntBASIC4.15□□□□□ -1.75
SYNE4Q8N205 RPL23AP41-201ENST00000484754 458 ntBASIC4.15□□□□□ -1.75
SYNE4Q8N205 AC083904.1-201ENST00000487828 231 ntBASIC4.15□□□□□ -1.75
SYNE4Q8N205 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.15□□□□□ -1.75
SYNE4Q8N205 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.15□□□□□ -1.75
SYNE4Q8N205 CCDC34P1-201ENST00000507441 517 ntBASIC4.15□□□□□ -1.75
SYNE4Q8N205 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.15□□□□□ -1.75
SYNE4Q8N205 RNU6-273P-201ENST00000516937 96 ntBASIC4.15□□□□□ -1.75
SYNE4Q8N205 SNORA25.17-201ENST00000517184 124 ntBASIC4.15□□□□□ -1.75
SYNE4Q8N205 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.15□□□□□ -1.75
SYNE4Q8N205 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.15□□□□□ -1.75
SYNE4Q8N205 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.15□□□□□ -1.75
SYNE4Q8N205 AC004024.1-201ENST00000549244 247 ntBASIC4.15□□□□□ -1.75
SYNE4Q8N205 AL121603.1-201ENST00000553815 142 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms