Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 AC090888.2-201ENST00000559765 1144 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 MIR4782-201ENST00000577987 79 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 MIR3908-201ENST00000579798 126 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 MIR3118-1-201ENST00000581787 76 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 AC015871.2-201ENST00000603605 948 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 AC144521.1-201ENST00000607148 956 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 AC090115.4-201ENST00000609970 188 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 MIR6075-201ENST00000620782 95 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 AL512643.1-201ENST00000635735 524 ntBASIC1.84□□□□□ -2.11
MRPL55Q7Z7F7 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.84□□□□□ -2.12
MRPL55Q7Z7F7 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
MRPL55Q7Z7F7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
MRPL55Q7Z7F7 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 AC092104.1-201ENST00000497346 1441 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 Z75746.1-201ENST00000440243 2080 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 Y_RNA.18-201ENST00000362461 102 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 SNORA75B-201ENST00000384053 137 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 SNORA40C-201ENST00000391285 128 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 AL355497.1-201ENST00000406262 551 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 RNU2-62P-201ENST00000410868 191 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 AC092809.3-201ENST00000415453 231 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 NPM1P11-201ENST00000417106 855 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 AL591212.2-201ENST00000433923 257 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 RPS20P5-201ENST00000434808 360 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 AL831737.1-201ENST00000441288 271 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 RNU6-953P-201ENST00000459154 107 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 RPS3AP22-201ENST00000488297 769 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 AC018437.1-201ENST00000492214 406 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 AC023194.1-201ENST00000493084 308 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 AC083906.5-201ENST00000503722 328 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 AC020699.1-201ENST00000505161 445 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 AC109927.2-201ENST00000506416 303 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 AC008885.1-201ENST00000514930 301 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 SCGB1D5P-201ENST00000515134 247 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 SNORA25.11-201ENST00000515935 105 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 SNORA31.11-201ENST00000516528 139 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 RNU6-914P-201ENST00000516749 109 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 RNU6-1092P-201ENST00000516955 87 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 RNU6-1315P-201ENST00000517187 99 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 AC022616.6-201ENST00000520479 119 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 MTND2P32-201ENST00000521584 1038 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 HPRT1P3-201ENST00000539521 576 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 AC079598.5-201ENST00000547460 117 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 LINC00933-203ENST00000559812 219 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 AC012435.1-202ENST00000568772 240 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 AL354943.1-201ENST00000572103 781 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 AC012213.3-201ENST00000577199 777 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 MTCYBP22-201ENST00000603788 447 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 AL138963.2-201ENST00000605137 226 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 AC022893.3-201ENST00000607665 437 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 AL136370.1-201ENST00000608166 691 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 AC016597.2-201ENST00000613256 341 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 AC130324.3-201ENST00000614165 542 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 AC010378.1-201ENST00000619270 362 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 AC091953.5-201ENST00000622919 233 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 AC091953.2-201ENST00000623979 160 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.83□□□□□ -2.12
MRPL55Q7Z7F7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
MRPL55Q7Z7F7 TEX21P-201ENST00000447107 1476 ntBASIC1.82□□□□□ -2.12
MRPL55Q7Z7F7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.82□□□□□ -2.12
MRPL55Q7Z7F7 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
MRPL55Q7Z7F7 SNORA54-201ENST00000384281 123 ntBASIC1.82□□□□□ -2.12
MRPL55Q7Z7F7 RNU6-166P-201ENST00000384371 107 ntBASIC1.82□□□□□ -2.12
MRPL55Q7Z7F7 CIR1P3-201ENST00000405137 479 ntBASIC1.82□□□□□ -2.12
MRPL55Q7Z7F7 AL138885.1-201ENST00000405921 675 ntBASIC1.82□□□□□ -2.12
MRPL55Q7Z7F7 AC097463.2-201ENST00000421074 142 ntBASIC1.82□□□□□ -2.12
MRPL55Q7Z7F7 AL389915.1-201ENST00000422463 466 ntBASIC1.82□□□□□ -2.12
MRPL55Q7Z7F7 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.82□□□□□ -2.12
MRPL55Q7Z7F7 RPL37P21-201ENST00000435890 276 ntBASIC1.82□□□□□ -2.12
MRPL55Q7Z7F7 AC016691.1-201ENST00000441321 413 ntBASIC1.82□□□□□ -2.12
MRPL55Q7Z7F7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC1.82□□□□□ -2.12
MRPL55Q7Z7F7 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.82□□□□□ -2.12
MRPL55Q7Z7F7 AL672167.3-201ENST00000465951 960 ntBASIC1.82□□□□□ -2.12
MRPL55Q7Z7F7 RPL7P43-201ENST00000478876 753 ntBASIC1.82□□□□□ -2.12
MRPL55Q7Z7F7 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.82□□□□□ -2.12
MRPL55Q7Z7F7 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.82□□□□□ -2.12
MRPL55Q7Z7F7 RNU6-678P-201ENST00000516832 109 ntBASIC1.82□□□□□ -2.12
MRPL55Q7Z7F7 RNU6-143P-201ENST00000516942 93 ntBASIC1.82□□□□□ -2.12
MRPL55Q7Z7F7 MRPS36P3-201ENST00000519284 130 ntBASIC1.82□□□□□ -2.12
MRPL55Q7Z7F7 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.82□□□□□ -2.12
MRPL55Q7Z7F7 AC121758.2-201ENST00000553271 193 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms