Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 AC138393.1-203ENST00000327086 343 ntBASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 RNU6-254P-201ENST00000363377 107 ntBASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 SNORD113-7-201ENST00000363762 77 ntBASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 RNU6-658P-201ENST00000384606 106 ntBASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 SNORA1.3-201ENST00000384676 136 ntBASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 MIR129-1-201ENST00000384972 72 ntBASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 MIR450B-201ENST00000401182 78 ntBASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 AL356057.2-201ENST00000403318 432 ntBASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 AL356432.1-201ENST00000405809 419 ntBASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 RN7SKP32-201ENST00000410167 303 ntBASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 RPL31P12-201ENST00000422587 358 ntBASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 RPEP3-201ENST00000425462 676 ntBASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 RPL23AP1-201ENST00000428990 471 ntBASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 AL365400.1-201ENST00000431854 640 ntBASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 NDUFA5P4-201ENST00000436704 385 ntBASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 MRPS31P2-201ENST00000451581 518 ntBASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 AC104472.2-201ENST00000469035 601 ntBASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 MIR892C-201ENST00000516410 77 ntBASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 MIR3941-201ENST00000582572 103 ntBASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 MIR3609-201ENST00000582661 80 ntBASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 AC243960.4-201ENST00000600532 288 ntBASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 NUTF2P8-201ENST00000604593 363 ntBASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 MIR378J-201ENST00000611988 109 ntBASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 AC104985.2-201ENST00000620598 500 ntBASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 RMST_7.1-201ENST00000621935 268 ntBASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.21□□□□□ -1.89
TMEM88Q6PEY1 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.21□□□□□ -1.89
TMEM88Q6PEY1 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 MIR412-201ENST00000362142 91 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 RNA5SP447-201ENST00000363749 119 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 Y_RNA.184-201ENST00000363884 108 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 RNU6-384P-201ENST00000364900 104 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 Y_RNA.529-201ENST00000384586 119 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 SNORA40C-201ENST00000391285 128 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 AL391417.1-201ENST00000404100 426 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 RNA5SP38-201ENST00000410750 119 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 Y_RNA.623-201ENST00000411128 95 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 RNU6-607P-201ENST00000411283 108 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 AL353729.1-201ENST00000425044 720 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 SKA2P1-201ENST00000425592 390 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 C4BPAP2-201ENST00000428434 478 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 RPL23AP93-201ENST00000440847 484 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 AC092798.1-201ENST00000458542 409 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 RPL35AP15-201ENST00000468042 339 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 HMGN2P13-201ENST00000476476 274 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 HMGB1P30-201ENST00000492455 606 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 RNU6-1069P-201ENST00000516612 133 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 SNORA25.17-201ENST00000517184 124 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 IGLVIV-65-201ENST00000517313 360 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 AC009643.1-201ENST00000532030 391 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 AC006064.5-201ENST00000541782 248 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 AC011602.1-201ENST00000546484 331 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 AMZ2P1-203ENST00000565833 850 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 MIR4277-201ENST00000578298 84 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 MIR4284-201ENST00000578924 81 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 LRRC37A5P-203ENST00000580181 585 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 SNORA51-201ENST00000606420 132 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 AC025253.1-201ENST00000613623 543 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 MIR7153-201ENST00000637758 57 ntBASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TMEM88Q6PEY1 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms