Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AL358472.1-201ENST00000431295 329 ntBASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 RPS11P1-201ENST00000451072 473 ntBASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 AC114801.2-201ENST00000503825 781 ntBASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 COX7A2P2-201ENST00000505291 250 ntBASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 AC009901.1-201ENST00000506703 541 ntBASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 RNU1-95P-201ENST00000516357 160 ntBASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 RNU1-128P-201ENST00000516704 160 ntBASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 AC008694.2-201ENST00000517591 306 ntBASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 HMGB1P50-201ENST00000605814 607 ntBASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 AC009570.1-201ENST00000609599 745 ntBASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 U2.17-201ENST00000611454 95 ntBASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 AP001273.1-201ENST00000624493 3152 ntBASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 Y_RNA.2-201ENST00000362330 96 ntBASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 Y_RNA.152-201ENST00000363578 100 ntBASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 Y_RNA.424-201ENST00000384063 103 ntBASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 SNORD51-201ENST00000384320 80 ntBASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 MIR548M-201ENST00000408260 86 ntBASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 MIR1252-201ENST00000408861 65 ntBASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 MRPS18BP2-201ENST00000434310 759 ntBASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 SNORD97-201ENST00000459187 142 ntBASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 AC135721.1-201ENST00000497954 479 ntBASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 AC106782.4-201ENST00000568264 210 ntBASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 RPL23AP84-201ENST00000571193 464 ntBASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 SRGNP1-201ENST00000603392 451 ntBASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 AC012468.1-201ENST00000604888 430 ntBASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 AC007179.3-201ENST00000604976 235 ntBASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 AL034408.1-202ENST00000636088 415 ntBASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.39□□□□□ -1.71
CNKSR3Q6P9H4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 AC027287.1-201ENST00000553115 1453 ntBASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 SNORD62.1-201ENST00000362541 86 ntBASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 Y_RNA.117-201ENST00000363294 101 ntBASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 SNORA5A-201ENST00000384111 134 ntBASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 Y_RNA.483-201ENST00000384380 101 ntBASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 U8.11-201ENST00000384699 133 ntBASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 U8.12-201ENST00000384701 133 ntBASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 RNU2-38P-201ENST00000410856 79 ntBASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 RPS17P13-201ENST00000448974 407 ntBASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 snoU109.4-201ENST00000458953 143 ntBASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 snoU13.24-201ENST00000458998 104 ntBASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 RNU7-167P-201ENST00000459160 62 ntBASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 U8.18-201ENST00000459285 133 ntBASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 GZMAP1-201ENST00000503054 631 ntBASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 RANP3-201ENST00000530970 276 ntBASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 HSBP1P1-201ENST00000555205 166 ntBASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 AL451044.1-201ENST00000604867 238 ntBASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 AC007390.2-201ENST00000606229 3803 ntBASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 AL161423.1-201ENST00000613700 262 ntBASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 EXOC5P1-201ENST00000510543 1969 ntBASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 AC000374.1-201ENST00000434698 1745 ntBASIC4.38□□□□□ -1.71
CNKSR3Q6P9H4 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 EOGT-210ENST00000615922 1931 ntBASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 Y_RNA.26-201ENST00000362539 101 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms