Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
RNF213Q63HN8 RNU1-109P-201ENST00000383960 147 ntBASIC0.3□□□□□ -2.36
RNF213Q63HN8 AL512604.1-201ENST00000404812 257 ntBASIC0.3□□□□□ -2.36
RNF213Q63HN8 RPS3AP1-201ENST00000413190 320 ntBASIC0.3□□□□□ -2.36
RNF213Q63HN8 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.3□□□□□ -2.36
RNF213Q63HN8 AL500527.1-201ENST00000448532 255 ntBASIC0.3□□□□□ -2.36
RNF213Q63HN8 AC093023.1-201ENST00000547375 507 ntBASIC0.3□□□□□ -2.36
RNF213Q63HN8 AC084033.1-201ENST00000550830 633 ntBASIC0.3□□□□□ -2.36
RNF213Q63HN8 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.3□□□□□ -2.36
RNF213Q63HN8 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
RNF213Q63HN8 SNORA16B-201ENST00000364674 135 ntBASIC0.3□□□□□ -2.36
RNF213Q63HN8 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC0.3□□□□□ -2.36
RNF213Q63HN8 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC0.3□□□□□ -2.36
RNF213Q63HN8 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC0.3□□□□□ -2.36
RNF213Q63HN8 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.3□□□□□ -2.36
RNF213Q63HN8 AC109927.2-201ENST00000506416 303 ntBASIC0.3□□□□□ -2.36
RNF213Q63HN8 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC0.3□□□□□ -2.36
RNF213Q63HN8 YWHAQP7-201ENST00000603536 658 ntBASIC0.3□□□□□ -2.36
RNF213Q63HN8 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC0.29□□□□□ -2.36
RNF213Q63HN8 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.29□□□□□ -2.36
RNF213Q63HN8 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC0.29□□□□□ -2.36
RNF213Q63HN8 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC0.29□□□□□ -2.36
RNF213Q63HN8 MIR5194-201ENST00000582634 120 ntBASIC0.29□□□□□ -2.36
RNF213Q63HN8 DUXAP4-201ENST00000603046 613 ntBASIC0.29□□□□□ -2.36
RNF213Q63HN8 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC0.29□□□□□ -2.36
RNF213Q63HN8 AC013470.4-201ENST00000619978 986 ntBASIC0.29□□□□□ -2.36
RNF213Q63HN8 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.29□□□□□ -2.36
RNF213Q63HN8 MIR587-201ENST00000384845 96 ntBASIC0.29□□□□□ -2.36
RNF213Q63HN8 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC0.29□□□□□ -2.36
RNF213Q63HN8 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC0.29□□□□□ -2.36
RNF213Q63HN8 ELOCP32-201ENST00000548625 324 ntBASIC0.29□□□□□ -2.36
RNF213Q63HN8 AC112503.2-201ENST00000609005 552 ntBASIC0.29□□□□□ -2.36
RNF213Q63HN8 AL138726.1-201ENST00000614873 333 ntBASIC0.29□□□□□ -2.36
RNF213Q63HN8 RNU6-1097P-201ENST00000363586 107 ntBASIC0.29□□□□□ -2.36
RNF213Q63HN8 SNORD56-201ENST00000413522 71 ntBASIC0.29□□□□□ -2.36
RNF213Q63HN8 RPL30P14-201ENST00000482744 348 ntBASIC0.29□□□□□ -2.36
RNF213Q63HN8 TPT1P8-201ENST00000510120 555 ntBASIC0.29□□□□□ -2.36
RNF213Q63HN8 RNU6-56P-201ENST00000516986 93 ntBASIC0.29□□□□□ -2.36
RNF213Q63HN8 AL157871.3-201ENST00000557231 293 ntBASIC0.29□□□□□ -2.36
RNF213Q63HN8 AL355297.3-201ENST00000604082 446 ntBASIC0.29□□□□□ -2.36
RNF213Q63HN8 AC106052.1-201ENST00000608029 497 ntBASIC0.29□□□□□ -2.36
RNF213Q63HN8 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.29□□□□□ -2.36
RNF213Q63HN8 MIR144-201ENST00000384886 86 ntBASIC0.29□□□□□ -2.36
RNF213Q63HN8 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC0.29□□□□□ -2.36
RNF213Q63HN8 USP9YP24-201ENST00000434374 697 ntBASIC0.29□□□□□ -2.36
RNF213Q63HN8 TRAPPC2P9-201ENST00000434556 343 ntBASIC0.29□□□□□ -2.36
RNF213Q63HN8 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.29□□□□□ -2.36
RNF213Q63HN8 AP000926.1-201ENST00000479573 241 ntBASIC0.29□□□□□ -2.36
RNF213Q63HN8 AC245128.3-201ENST00000594721 748 ntBASIC0.29□□□□□ -2.36
RNF213Q63HN8 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC0.29□□□□□ -2.36
RNF213Q63HN8 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
RNF213Q63HN8 MRPL35P1-201ENST00000404272 572 ntBASIC0.28□□□□□ -2.36
RNF213Q63HN8 RPL31P60-201ENST00000478450 367 ntBASIC0.28□□□□□ -2.36
RNF213Q63HN8 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.28□□□□□ -2.36
RNF213Q63HN8 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.28□□□□□ -2.36
RNF213Q63HN8 AL357075.2-201ENST00000614906 189 ntBASIC0.28□□□□□ -2.36
RNF213Q63HN8 AC009090.3-201ENST00000616553 565 ntBASIC0.28□□□□□ -2.36
RNF213Q63HN8 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
RNF213Q63HN8 Y_RNA.498-201ENST00000384460 102 ntBASIC0.28□□□□□ -2.36
RNF213Q63HN8 RNU6-160P-201ENST00000384591 107 ntBASIC0.28□□□□□ -2.36
RNF213Q63HN8 MIR635-201ENST00000384830 98 ntBASIC0.28□□□□□ -2.36
RNF213Q63HN8 MIR224-201ENST00000384889 81 ntBASIC0.28□□□□□ -2.36
RNF213Q63HN8 AC244453.4-201ENST00000419150 388 ntBASIC0.28□□□□□ -2.36
RNF213Q63HN8 AC246680.2-201ENST00000422106 389 ntBASIC0.28□□□□□ -2.36
RNF213Q63HN8 AC005410.1-202ENST00000460347 485 ntBASIC0.28□□□□□ -2.36
RNF213Q63HN8 MRPL42P6-201ENST00000486397 371 ntBASIC0.28□□□□□ -2.36
RNF213Q63HN8 RPS27P26-201ENST00000494583 239 ntBASIC0.28□□□□□ -2.36
RNF213Q63HN8 CYCTP-201ENST00000504253 315 ntBASIC0.28□□□□□ -2.36
RNF213Q63HN8 AL591926.4-201ENST00000616895 298 ntBASIC0.28□□□□□ -2.36
RNF213Q63HN8 XIST_intron.1-201ENST00000619444 68 ntBASIC0.28□□□□□ -2.36
RNF213Q63HN8 ZNF663P-202ENST00000641770 1131 ntBASIC0.28□□□□□ -2.36
RNF213Q63HN8 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.28□□□□□ -2.36
RNF213Q63HN8 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC0.28□□□□□ -2.36
RNF213Q63HN8 SNORD114-31-201ENST00000363219 75 ntBASIC0.28□□□□□ -2.36
RNF213Q63HN8 AL445213.1-201ENST00000412589 747 ntBASIC0.28□□□□□ -2.36
RNF213Q63HN8 U8.21-201ENST00000459536 136 ntBASIC0.28□□□□□ -2.36
RNF213Q63HN8 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC0.28□□□□□ -2.36
RNF213Q63HN8 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.28□□□□□ -2.36
RNF213Q63HN8 RNA5SP291-201ENST00000517222 105 ntBASIC0.28□□□□□ -2.36
RNF213Q63HN8 AC034114.1-201ENST00000520293 285 ntBASIC0.28□□□□□ -2.36
RNF213Q63HN8 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
RNF213Q63HN8 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.28□□□□□ -2.36
RNF213Q63HN8 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC0.28□□□□□ -2.36
RNF213Q63HN8 MIR4305-201ENST00000583252 102 ntBASIC0.28□□□□□ -2.36
RNF213Q63HN8 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC0.28□□□□□ -2.36
RNF213Q63HN8 MTND5P17-201ENST00000418405 1603 ntBASIC0.28□□□□□ -2.36
RNF213Q63HN8 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.37
RNF213Q63HN8 XKRY2-202ENST00000623874 1581 ntBASIC0.28□□□□□ -2.37
RNF213Q63HN8 XKRY-202ENST00000624960 1581 ntBASIC0.28□□□□□ -2.37
RNF213Q63HN8 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC0.28□□□□□ -2.37
RNF213Q63HN8 SNORA63.3-201ENST00000362682 132 ntBASIC0.28□□□□□ -2.37
RNF213Q63HN8 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC0.28□□□□□ -2.37
RNF213Q63HN8 U3.8-201ENST00000363675 217 ntBASIC0.27□□□□□ -2.37
RNF213Q63HN8 U8.7-201ENST00000364940 136 ntBASIC0.27□□□□□ -2.37
RNF213Q63HN8 RNU2-40P-201ENST00000410833 196 ntBASIC0.27□□□□□ -2.37
RNF213Q63HN8 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC0.27□□□□□ -2.37
RNF213Q63HN8 ZNF90P2-204ENST00000419323 1075 ntBASIC0.27□□□□□ -2.37
RNF213Q63HN8 SDAD1P3-201ENST00000427380 333 ntBASIC0.27□□□□□ -2.37
RNF213Q63HN8 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.27□□□□□ -2.37
RNF213Q63HN8 KLRA1P-201ENST00000503499 986 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms