Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 AC019176.2-201ENST00000611579 315 ntBASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 AC084757.4-201ENST00000616350 526 ntBASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
USPL1Q5W0Q7 Z82217.1-201ENST00000625157 8149 ntBASIC5.11□□□□□ -1.59
USPL1Q5W0Q7 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
USPL1Q5W0Q7 Y_RNA.188-201ENST00000363952 111 ntBASIC5.11□□□□□ -1.59
USPL1Q5W0Q7 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
USPL1Q5W0Q7 HSPE1P8-201ENST00000406997 288 ntBASIC5.11□□□□□ -1.59
USPL1Q5W0Q7 CBX3P6-201ENST00000430257 527 ntBASIC5.11□□□□□ -1.59
USPL1Q5W0Q7 HMGB1P12-201ENST00000438594 598 ntBASIC5.11□□□□□ -1.59
USPL1Q5W0Q7 AP000942.1-201ENST00000463969 747 ntBASIC5.11□□□□□ -1.59
USPL1Q5W0Q7 VN1R104P-201ENST00000505115 1009 ntBASIC5.11□□□□□ -1.59
USPL1Q5W0Q7 RNU6-927P-201ENST00000516199 100 ntBASIC5.11□□□□□ -1.59
USPL1Q5W0Q7 RNU6-914P-201ENST00000516749 109 ntBASIC5.11□□□□□ -1.59
USPL1Q5W0Q7 RNU4-60P-201ENST00000517239 135 ntBASIC5.11□□□□□ -1.59
USPL1Q5W0Q7 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
USPL1Q5W0Q7 CYCSP30-201ENST00000546447 172 ntBASIC5.11□□□□□ -1.59
USPL1Q5W0Q7 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.11□□□□□ -1.59
USPL1Q5W0Q7 AC025627.2-201ENST00000576220 160 ntBASIC5.11□□□□□ -1.59
USPL1Q5W0Q7 AC073539.2-201ENST00000597113 165 ntBASIC5.11□□□□□ -1.59
USPL1Q5W0Q7 AC034102.8-201ENST00000615146 484 ntBASIC5.11□□□□□ -1.59
USPL1Q5W0Q7 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.11□□□□□ -1.59
USPL1Q5W0Q7 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
USPL1Q5W0Q7 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.11□□□□□ -1.59
USPL1Q5W0Q7 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
USPL1Q5W0Q7 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.11□□□□□ -1.59
USPL1Q5W0Q7 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
USPL1Q5W0Q7 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 RNU6-596P-201ENST00000365395 98 ntBASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 Y_RNA.473-201ENST00000384333 102 ntBASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 RPL21P90-201ENST00000415692 466 ntBASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 MTATP6P4-201ENST00000427725 675 ntBASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 CEP57L1P1-201ENST00000430943 1201 ntBASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 AL365440.1-201ENST00000436135 2167 ntBASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 AC011816.1-201ENST00000441346 546 ntBASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 AC087588.1-201ENST00000462203 316 ntBASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 RPS15AP34-201ENST00000487776 387 ntBASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 AC110768.1-201ENST00000509222 400 ntBASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 PPBPP1-201ENST00000510807 373 ntBASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 AC009812.2-201ENST00000517657 457 ntBASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 AC007991.1-201ENST00000522680 631 ntBASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 SUB1P3-201ENST00000564581 315 ntBASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 MIR548AC-201ENST00000585049 88 ntBASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 AL355598.1-201ENST00000604169 202 ntBASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 RNA5SP108-201ENST00000605921 117 ntBASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 MIR432-201ENST00000606207 94 ntBASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 AC090425.1-201ENST00000610007 140 ntBASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 AL391261.4-201ENST00000616012 481 ntBASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 AL353748.2-201ENST00000622148 471 ntBASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
USPL1Q5W0Q7 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 Y_RNA.39-201ENST00000362620 98 ntBASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 SNORA36C-201ENST00000384289 132 ntBASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 RNU6-505P-201ENST00000384427 107 ntBASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 Y_RNA.534-201ENST00000384599 112 ntBASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 RNU6-306P-201ENST00000384617 107 ntBASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 SYF2P2-201ENST00000417620 583 ntBASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 NUP35P1-201ENST00000422734 947 ntBASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 RPL23AP50-201ENST00000434149 455 ntBASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 U8.20-201ENST00000459445 131 ntBASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 RPL29P14-201ENST00000495837 428 ntBASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 AC110794.1-201ENST00000505816 425 ntBASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 RNA5SP384-201ENST00000516615 116 ntBASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 RNA5SP179-201ENST00000517284 121 ntBASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 SNRPGP16-201ENST00000533275 226 ntBASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms