Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.63□□□□□ -1.83
RNF220Q5VTB9 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
RNF220Q5VTB9 AL513302.2-201ENST00000562313 1842 ntBASIC3.63□□□□□ -1.83
RNF220Q5VTB9 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.63□□□□□ -1.83
RNF220Q5VTB9 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.63□□□□□ -1.83
RNF220Q5VTB9 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF220Q5VTB9 Y_RNA.160-201ENST00000363677 92 ntBASIC3.63□□□□□ -1.83
RNF220Q5VTB9 RN7SKP280-201ENST00000364196 304 ntBASIC3.63□□□□□ -1.83
RNF220Q5VTB9 RNU6-522P-201ENST00000364497 107 ntBASIC3.63□□□□□ -1.83
RNF220Q5VTB9 Y_RNA.373-201ENST00000365600 103 ntBASIC3.63□□□□□ -1.83
RNF220Q5VTB9 AP002088.1-201ENST00000382740 395 ntBASIC3.63□□□□□ -1.83
RNF220Q5VTB9 Y_RNA.480-201ENST00000384364 102 ntBASIC3.63□□□□□ -1.83
RNF220Q5VTB9 EI24P2-201ENST00000397776 1076 ntBASIC3.63□□□□□ -1.83
RNF220Q5VTB9 NDUFS5P4-201ENST00000412983 318 ntBASIC3.63□□□□□ -1.83
RNF220Q5VTB9 SKA2P1-201ENST00000425592 390 ntBASIC3.63□□□□□ -1.83
RNF220Q5VTB9 AC007560.1-201ENST00000426912 237 ntBASIC3.63□□□□□ -1.83
RNF220Q5VTB9 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.63□□□□□ -1.83
RNF220Q5VTB9 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.63□□□□□ -1.83
RNF220Q5VTB9 MTATP6P23-201ENST00000440153 476 ntBASIC3.63□□□□□ -1.83
RNF220Q5VTB9 RPL37P4-201ENST00000448908 268 ntBASIC3.63□□□□□ -1.83
RNF220Q5VTB9 NDUFB1P2-201ENST00000449477 176 ntBASIC3.63□□□□□ -1.83
RNF220Q5VTB9 AC006539.3-201ENST00000454258 129 ntBASIC3.63□□□□□ -1.83
RNF220Q5VTB9 AC007547.1-201ENST00000462177 490 ntBASIC3.63□□□□□ -1.83
RNF220Q5VTB9 AC010401.1-201ENST00000463867 348 ntBASIC3.63□□□□□ -1.83
RNF220Q5VTB9 DYNLL1P5-201ENST00000467158 270 ntBASIC3.63□□□□□ -1.83
RNF220Q5VTB9 AC026801.1-201ENST00000497178 464 ntBASIC3.63□□□□□ -1.83
RNF220Q5VTB9 AC098799.2-201ENST00000509466 868 ntBASIC3.63□□□□□ -1.83
RNF220Q5VTB9 HIGD1AP13-201ENST00000509878 289 ntBASIC3.63□□□□□ -1.83
RNF220Q5VTB9 AC087369.1-201ENST00000520775 996 ntBASIC3.63□□□□□ -1.83
RNF220Q5VTB9 AC093331.1-201ENST00000521474 169 ntBASIC3.63□□□□□ -1.83
RNF220Q5VTB9 AC134698.4-201ENST00000523451 826 ntBASIC3.63□□□□□ -1.83
RNF220Q5VTB9 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.63□□□□□ -1.83
RNF220Q5VTB9 YPEL5P3-201ENST00000547227 352 ntBASIC3.63□□□□□ -1.83
RNF220Q5VTB9 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
RNF220Q5VTB9 AC090877.1-201ENST00000561418 344 ntBASIC3.63□□□□□ -1.83
RNF220Q5VTB9 AC092747.3-201ENST00000603769 301 ntBASIC3.63□□□□□ -1.83
RNF220Q5VTB9 AC012468.1-201ENST00000604888 430 ntBASIC3.63□□□□□ -1.83
RNF220Q5VTB9 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF220Q5VTB9 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
RNF220Q5VTB9 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.62□□□□□ -1.83
RNF220Q5VTB9 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.62□□□□□ -1.83
RNF220Q5VTB9 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.62□□□□□ -1.83
RNF220Q5VTB9 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.62□□□□□ -1.83
RNF220Q5VTB9 Y_RNA.100-201ENST00000363141 102 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 RNA5SP219-201ENST00000390940 113 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 AL162578.1-201ENST00000406202 378 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 Y_RNA.623-201ENST00000411128 95 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 RNU6-607P-201ENST00000411283 108 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF220Q5VTB9 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF220Q5VTB9 AL353729.1-201ENST00000425044 720 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF220Q5VTB9 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.62□□□□□ -1.83
RNF220Q5VTB9 AL078601.1-201ENST00000444542 271 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 MTND4P18-201ENST00000447010 465 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 AL590639.1-201ENST00000456484 337 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 RPL26P9-201ENST00000457466 433 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 AC092798.1-201ENST00000458542 409 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 AC034236.1-201ENST00000469891 373 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 AC006463.2-201ENST00000473326 348 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 RN7SL442P-201ENST00000473804 320 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 HMGN2P13-201ENST00000476476 274 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.62□□□□□ -1.83
RNF220Q5VTB9 Y_RNA.665-201ENST00000516177 98 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.62□□□□□ -1.83
RNF220Q5VTB9 AC023050.3-201ENST00000541142 333 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 NACAP3-201ENST00000552100 481 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 AC090115.3-201ENST00000553218 849 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 AL391261.3-201ENST00000557194 520 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 H3F3AP1-201ENST00000559984 334 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 MIR4782-201ENST00000577987 79 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 LRRC37A5P-203ENST00000580181 585 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.62□□□□□ -1.83
RNF220Q5VTB9 VN1R80P-201ENST00000597126 338 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 AL645944.1-201ENST00000603857 493 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.62□□□□□ -1.83
RNF220Q5VTB9 RNU4-89P-201ENST00000607443 133 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 AC103705.1-201ENST00000619013 241 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 XIST_intron.1-201ENST00000619444 68 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 AL031601.2-202ENST00000622650 282 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF220Q5VTB9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RNF220Q5VTB9 AC090617.10-201ENST00000624308 134 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 MIR492-201ENST00000638676 116 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RNF220Q5VTB9 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
RNF220Q5VTB9 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.62□□□□□ -1.83
RNF220Q5VTB9 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.62□□□□□ -1.83
RNF220Q5VTB9 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.62□□□□□ -1.83
RNF220Q5VTB9 SRP72P2-201ENST00000344851 1979 ntBASIC3.62□□□□□ -1.83
RNF220Q5VTB9 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.61□□□□□ -1.83
RNF220Q5VTB9 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RNF220Q5VTB9 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.61□□□□□ -1.83
RNF220Q5VTB9 AC121333.1-201ENST00000567488 2709 ntBASIC3.61□□□□□ -1.83
RNF220Q5VTB9 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RNF220Q5VTB9 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
RNF220Q5VTB9 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.61□□□□□ -1.83
RNF220Q5VTB9 Y_RNA.72-201ENST00000362894 103 ntBASIC3.61□□□□□ -1.83
RNF220Q5VTB9 RNA5SP130-201ENST00000364431 114 ntBASIC3.61□□□□□ -1.83
RNF220Q5VTB9 RNU6-198P-201ENST00000384258 104 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms