Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RNU6-923P-201ENST00000364753 107 ntBASIC5.72□□□□□ -1.49
RC3H1Q5TC82 SNORD116-18-201ENST00000383961 92 ntBASIC5.72□□□□□ -1.49
RC3H1Q5TC82 SNORD63-201ENST00000384262 68 ntBASIC5.72□□□□□ -1.49
RC3H1Q5TC82 RNU6-658P-201ENST00000384606 106 ntBASIC5.72□□□□□ -1.49
RC3H1Q5TC82 MIR3065-201ENST00000390137 79 ntBASIC5.72□□□□□ -1.49
RC3H1Q5TC82 Y_RNA.586-201ENST00000391146 98 ntBASIC5.72□□□□□ -1.49
RC3H1Q5TC82 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC5.72□□□□□ -1.49
RC3H1Q5TC82 AC008267.6-201ENST00000441664 139 ntBASIC5.72□□□□□ -1.49
RC3H1Q5TC82 AC034236.1-201ENST00000469891 373 ntBASIC5.72□□□□□ -1.49
RC3H1Q5TC82 RNU6-1012P-201ENST00000516606 109 ntBASIC5.72□□□□□ -1.49
RC3H1Q5TC82 RNU6-919P-201ENST00000516731 104 ntBASIC5.72□□□□□ -1.49
RC3H1Q5TC82 RNU2-31P-201ENST00000516954 155 ntBASIC5.72□□□□□ -1.49
RC3H1Q5TC82 AC103783.1-201ENST00000520506 373 ntBASIC5.72□□□□□ -1.49
RC3H1Q5TC82 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.72□□□□□ -1.49
RC3H1Q5TC82 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.72□□□□□ -1.49
RC3H1Q5TC82 AL034351.1-201ENST00000605288 668 ntBASIC5.72□□□□□ -1.49
RC3H1Q5TC82 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.72□□□□□ -1.49
RC3H1Q5TC82 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.72□□□□□ -1.49
RC3H1Q5TC82 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RC3H1Q5TC82 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
RC3H1Q5TC82 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
RC3H1Q5TC82 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RC3H1Q5TC82 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RC3H1Q5TC82 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.72□□□□□ -1.49
RC3H1Q5TC82 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
RC3H1Q5TC82 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
RC3H1Q5TC82 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.71□□□□□ -1.49
RC3H1Q5TC82 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.71□□□□□ -1.5
RC3H1Q5TC82 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RC3H1Q5TC82 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.71□□□□□ -1.5
RC3H1Q5TC82 AC005332.5-201ENST00000591222 2919 ntBASIC5.71□□□□□ -1.5
RC3H1Q5TC82 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RC3H1Q5TC82 RNU6-1130P-201ENST00000365434 107 ntBASIC5.71□□□□□ -1.5
RC3H1Q5TC82 UBBP2-201ENST00000376781 231 ntBASIC5.71□□□□□ -1.5
RC3H1Q5TC82 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RC3H1Q5TC82 RNA5SP171-201ENST00000391071 115 ntBASIC5.71□□□□□ -1.5
RC3H1Q5TC82 RNU2-21P-201ENST00000410368 188 ntBASIC5.71□□□□□ -1.5
RC3H1Q5TC82 EIF4A1P3-201ENST00000411521 244 ntBASIC5.71□□□□□ -1.5
RC3H1Q5TC82 AL353621.1-201ENST00000418219 243 ntBASIC5.71□□□□□ -1.5
RC3H1Q5TC82 AC099677.1-201ENST00000420575 175 ntBASIC5.71□□□□□ -1.5
RC3H1Q5TC82 RPL26P6-201ENST00000440913 438 ntBASIC5.71□□□□□ -1.5
RC3H1Q5TC82 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC5.71□□□□□ -1.5
RC3H1Q5TC82 RN7SKP210-201ENST00000459176 261 ntBASIC5.71□□□□□ -1.5
RC3H1Q5TC82 RNU7-87P-201ENST00000459343 62 ntBASIC5.71□□□□□ -1.5
RC3H1Q5TC82 RPS27P26-201ENST00000494583 239 ntBASIC5.71□□□□□ -1.5
RC3H1Q5TC82 RPL30P11-201ENST00000495304 339 ntBASIC5.71□□□□□ -1.5
RC3H1Q5TC82 H3F3AP1-201ENST00000559984 334 ntBASIC5.71□□□□□ -1.5
RC3H1Q5TC82 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.71□□□□□ -1.5
RC3H1Q5TC82 AC024614.2-201ENST00000577584 372 ntBASIC5.71□□□□□ -1.5
RC3H1Q5TC82 MIR3158-1-201ENST00000583596 81 ntBASIC5.71□□□□□ -1.5
RC3H1Q5TC82 AC009318.2-201ENST00000610917 651 ntBASIC5.71□□□□□ -1.5
RC3H1Q5TC82 MIR8076-201ENST00000611401 83 ntBASIC5.71□□□□□ -1.5
RC3H1Q5TC82 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RC3H1Q5TC82 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RC3H1Q5TC82 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RC3H1Q5TC82 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RC3H1Q5TC82 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RC3H1Q5TC82 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RC3H1Q5TC82 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RC3H1Q5TC82 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RC3H1Q5TC82 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.71□□□□□ -1.5
RC3H1Q5TC82 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
RC3H1Q5TC82 AL022311.1-201ENST00000623726 19416 ntBASIC5.7□□□□□ -1.5
RC3H1Q5TC82 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RC3H1Q5TC82 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RC3H1Q5TC82 Y_RNA.488-201ENST00000384403 102 ntBASIC5.7□□□□□ -1.5
RC3H1Q5TC82 AL356095.1-201ENST00000417217 199 ntBASIC5.7□□□□□ -1.5
RC3H1Q5TC82 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC5.7□□□□□ -1.5
RC3H1Q5TC82 EIF4HP2-201ENST00000424380 563 ntBASIC5.7□□□□□ -1.5
RC3H1Q5TC82 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.7□□□□□ -1.5
RC3H1Q5TC82 TDGF1P1-201ENST00000445734 527 ntBASIC5.7□□□□□ -1.5
RC3H1Q5TC82 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.7□□□□□ -1.5
RC3H1Q5TC82 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.7□□□□□ -1.5
RC3H1Q5TC82 RPL37P6-202ENST00000464216 403 ntBASIC5.7□□□□□ -1.5
RC3H1Q5TC82 RPL23AP65-201ENST00000475608 468 ntBASIC5.7□□□□□ -1.5
RC3H1Q5TC82 RN7SL691P-201ENST00000494487 301 ntBASIC5.7□□□□□ -1.5
RC3H1Q5TC82 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.7□□□□□ -1.5
RC3H1Q5TC82 CASP1P1-201ENST00000526345 212 ntBASIC5.7□□□□□ -1.5
RC3H1Q5TC82 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RC3H1Q5TC82 SNRPGP16-201ENST00000533275 226 ntBASIC5.7□□□□□ -1.5
RC3H1Q5TC82 MIR4659A-201ENST00000580269 81 ntBASIC5.7□□□□□ -1.5
RC3H1Q5TC82 MIR548AC-201ENST00000585049 88 ntBASIC5.7□□□□□ -1.5
RC3H1Q5TC82 AC079587.1-201ENST00000603846 277 ntBASIC5.7□□□□□ -1.5
RC3H1Q5TC82 AC123912.5-201ENST00000605470 343 ntBASIC5.7□□□□□ -1.5
RC3H1Q5TC82 AC037487.3-201ENST00000606668 112 ntBASIC5.7□□□□□ -1.5
RC3H1Q5TC82 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC5.7□□□□□ -1.5
RC3H1Q5TC82 AL445487.1-201ENST00000415694 1580 ntBASIC5.7□□□□□ -1.5
RC3H1Q5TC82 AC000374.1-201ENST00000434698 1745 ntBASIC5.7□□□□□ -1.5
RC3H1Q5TC82 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.7□□□□□ -1.5
RC3H1Q5TC82 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.7□□□□□ -1.5
RC3H1Q5TC82 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
RC3H1Q5TC82 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.69□□□□□ -1.5
RC3H1Q5TC82 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RC3H1Q5TC82 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RC3H1Q5TC82 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RC3H1Q5TC82 AP001029.2-203ENST00000589795 4910 ntBASIC5.69□□□□□ -1.5
RC3H1Q5TC82 AC006971.1-201ENST00000407916 4486 ntBASIC5.69□□□□□ -1.5
RC3H1Q5TC82 MUC2-202ENST00000613187 4845 ntBASIC5.69□□□□□ -1.5
RC3H1Q5TC82 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
RC3H1Q5TC82 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms