Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 RNU2-41P-201ENST00000410991 178 ntBASIC0.41□□□□□ -2.34
UBR4Q5T4S7 RPS20P20-201ENST00000460498 340 ntBASIC0.41□□□□□ -2.34
UBR4Q5T4S7 RNU6-1247P-201ENST00000516622 98 ntBASIC0.41□□□□□ -2.34
UBR4Q5T4S7 SNORA48.11-201ENST00000517015 89 ntBASIC0.41□□□□□ -2.34
UBR4Q5T4S7 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC0.41□□□□□ -2.34
UBR4Q5T4S7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
UBR4Q5T4S7 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC0.41□□□□□ -2.34
UBR4Q5T4S7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
UBR4Q5T4S7 AC013268.2-201ENST00000420753 337 ntBASIC0.41□□□□□ -2.34
UBR4Q5T4S7 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC0.41□□□□□ -2.34
UBR4Q5T4S7 FAM60CP-201ENST00000591086 664 ntBASIC0.41□□□□□ -2.34
UBR4Q5T4S7 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC0.41□□□□□ -2.34
UBR4Q5T4S7 AL390862.1-201ENST00000635467 1469 ntBASIC0.4□□□□□ -2.34
UBR4Q5T4S7 Y_RNA.190-201ENST00000363964 101 ntBASIC0.4□□□□□ -2.34
UBR4Q5T4S7 AC019155.1-201ENST00000382242 574 ntBASIC0.4□□□□□ -2.34
UBR4Q5T4S7 RNU6-603P-201ENST00000411403 107 ntBASIC0.4□□□□□ -2.34
UBR4Q5T4S7 MTND4P27-201ENST00000450813 1354 ntBASIC0.4□□□□□ -2.35
UBR4Q5T4S7 Y_RNA.180-201ENST00000363867 113 ntBASIC0.4□□□□□ -2.35
UBR4Q5T4S7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.4□□□□□ -2.35
UBR4Q5T4S7 AL136380.1-201ENST00000447970 162 ntBASIC0.4□□□□□ -2.35
UBR4Q5T4S7 AC074198.2-201ENST00000508153 258 ntBASIC0.4□□□□□ -2.35
UBR4Q5T4S7 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.4□□□□□ -2.35
UBR4Q5T4S7 RNA5SP180-201ENST00000516181 101 ntBASIC0.4□□□□□ -2.35
UBR4Q5T4S7 PART1_2.1-201ENST00000612397 250 ntBASIC0.4□□□□□ -2.35
UBR4Q5T4S7 AL357075.2-201ENST00000614906 189 ntBASIC0.4□□□□□ -2.35
UBR4Q5T4S7 AC007785.2-201ENST00000598627 1916 ntBASIC0.4□□□□□ -2.35
UBR4Q5T4S7 Y_RNA.582-201ENST00000391023 95 ntBASIC0.4□□□□□ -2.35
UBR4Q5T4S7 AL136372.1-201ENST00000403060 228 ntBASIC0.4□□□□□ -2.35
UBR4Q5T4S7 MTND4LP22-201ENST00000508209 276 ntBASIC0.4□□□□□ -2.35
UBR4Q5T4S7 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.4□□□□□ -2.35
UBR4Q5T4S7 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.4□□□□□ -2.35
UBR4Q5T4S7 RPL23AP88-201ENST00000605759 454 ntBASIC0.4□□□□□ -2.35
UBR4Q5T4S7 AP003485.1-201ENST00000625093 753 ntBASIC0.4□□□□□ -2.35
UBR4Q5T4S7 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC0.4□□□□□ -2.35
UBR4Q5T4S7 MIR5087-201ENST00000635826 76 ntBASIC0.4□□□□□ -2.35
UBR4Q5T4S7 RNU6-46P-201ENST00000383860 107 ntBASIC0.4□□□□□ -2.35
UBR4Q5T4S7 RNU4-63P-201ENST00000411313 118 ntBASIC0.4□□□□□ -2.35
UBR4Q5T4S7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC0.4□□□□□ -2.35
UBR4Q5T4S7 RPL31P60-201ENST00000478450 367 ntBASIC0.4□□□□□ -2.35
UBR4Q5T4S7 OR8X1P-201ENST00000534542 869 ntBASIC0.4□□□□□ -2.35
UBR4Q5T4S7 AC009220.3-201ENST00000604318 586 ntBASIC0.4□□□□□ -2.35
UBR4Q5T4S7 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.4□□□□□ -2.35
UBR4Q5T4S7 AL512844.2-201ENST00000433990 593 ntBASIC0.39□□□□□ -2.35
UBR4Q5T4S7 PTGES3P5-201ENST00000455109 434 ntBASIC0.39□□□□□ -2.35
UBR4Q5T4S7 OR8K2P-201ENST00000524645 927 ntBASIC0.39□□□□□ -2.35
UBR4Q5T4S7 AC067838.1-201ENST00000606064 577 ntBASIC0.39□□□□□ -2.35
UBR4Q5T4S7 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
UBR4Q5T4S7 HSPE1P24-201ENST00000450782 238 ntBASIC0.39□□□□□ -2.35
UBR4Q5T4S7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.39□□□□□ -2.35
UBR4Q5T4S7 AL162730.1-201ENST00000605734 292 ntBASIC0.39□□□□□ -2.35
UBR4Q5T4S7 SNORD114-28-201ENST00000363610 72 ntBASIC0.39□□□□□ -2.35
UBR4Q5T4S7 RNU6-335P-201ENST00000364563 113 ntBASIC0.39□□□□□ -2.35
UBR4Q5T4S7 OR4R1P-201ENST00000529879 463 ntBASIC0.39□□□□□ -2.35
UBR4Q5T4S7 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.39□□□□□ -2.35
UBR4Q5T4S7 AC093023.1-201ENST00000547375 507 ntBASIC0.39□□□□□ -2.35
UBR4Q5T4S7 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC0.39□□□□□ -2.35
UBR4Q5T4S7 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC0.39□□□□□ -2.35
UBR4Q5T4S7 AC010615.1-201ENST00000594254 1764 ntBASIC0.39□□□□□ -2.35
UBR4Q5T4S7 MIR524-201ENST00000385242 87 ntBASIC0.39□□□□□ -2.35
UBR4Q5T4S7 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.39□□□□□ -2.35
UBR4Q5T4S7 RNU2-22P-201ENST00000411266 212 ntBASIC0.39□□□□□ -2.35
UBR4Q5T4S7 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC0.39□□□□□ -2.35
UBR4Q5T4S7 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC0.39□□□□□ -2.35
UBR4Q5T4S7 AL035407.2-201ENST00000454090 378 ntBASIC0.39□□□□□ -2.35
UBR4Q5T4S7 PMCHL2-203ENST00000457791 237 ntBASIC0.39□□□□□ -2.35
UBR4Q5T4S7 RPL23AP62-201ENST00000463396 453 ntBASIC0.39□□□□□ -2.35
UBR4Q5T4S7 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.39□□□□□ -2.35
UBR4Q5T4S7 AC010265.1-201ENST00000513509 211 ntBASIC0.39□□□□□ -2.35
UBR4Q5T4S7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.39□□□□□ -2.35
UBR4Q5T4S7 SNORA62.5-201ENST00000516634 120 ntBASIC0.39□□□□□ -2.35
UBR4Q5T4S7 AC090897.2-201ENST00000581715 130 ntBASIC0.39□□□□□ -2.35
UBR4Q5T4S7 BNIP3P25-201ENST00000596023 559 ntBASIC0.39□□□□□ -2.35
UBR4Q5T4S7 AL445213.1-201ENST00000412589 747 ntBASIC0.38□□□□□ -2.35
UBR4Q5T4S7 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC0.38□□□□□ -2.35
UBR4Q5T4S7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.38□□□□□ -2.35
UBR4Q5T4S7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.38□□□□□ -2.35
UBR4Q5T4S7 AP000797.1-201ENST00000478870 387 ntBASIC0.38□□□□□ -2.35
UBR4Q5T4S7 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.38□□□□□ -2.35
UBR4Q5T4S7 AP003717.3-201ENST00000544832 1180 ntBASIC0.38□□□□□ -2.35
UBR4Q5T4S7 OR5AQ1P-201ENST00000527596 927 ntBASIC0.38□□□□□ -2.35
UBR4Q5T4S7 AC013470.3-201ENST00000420252 1194 ntBASIC0.38□□□□□ -2.35
UBR4Q5T4S7 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC0.38□□□□□ -2.35
UBR4Q5T4S7 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
UBR4Q5T4S7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
UBR4Q5T4S7 MIR365B-201ENST00000362317 111 ntBASIC0.37□□□□□ -2.35
UBR4Q5T4S7 OR9R1P-201ENST00000412200 877 ntBASIC0.37□□□□□ -2.35
UBR4Q5T4S7 AL121601.2-201ENST00000438019 707 ntBASIC0.37□□□□□ -2.35
UBR4Q5T4S7 GPM6BP3-201ENST00000442797 145 ntBASIC0.37□□□□□ -2.35
UBR4Q5T4S7 AL357134.1-201ENST00000445848 426 ntBASIC0.37□□□□□ -2.35
UBR4Q5T4S7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.37□□□□□ -2.35
UBR4Q5T4S7 AP003484.1-201ENST00000530974 250 ntBASIC0.37□□□□□ -2.35
UBR4Q5T4S7 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.37□□□□□ -2.35
UBR4Q5T4S7 AC073592.7-201ENST00000623659 507 ntBASIC0.37□□□□□ -2.35
UBR4Q5T4S7 U3.8-201ENST00000363675 217 ntBASIC0.37□□□□□ -2.35
UBR4Q5T4S7 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
UBR4Q5T4S7 MIR1285-1-201ENST00000408593 84 ntBASIC0.37□□□□□ -2.35
UBR4Q5T4S7 SSXP9-201ENST00000417503 292 ntBASIC0.37□□□□□ -2.35
UBR4Q5T4S7 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.37□□□□□ -2.35
UBR4Q5T4S7 TRAPPC2P9-201ENST00000434556 343 ntBASIC0.37□□□□□ -2.35
UBR4Q5T4S7 RPS29P28-201ENST00000446439 141 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms