Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 HMGB1P24-202ENST00000615653 685 ntBASIC2.05□□□□□ -2.08
SNAPC4Q5SXM2 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.05□□□□□ -2.08
SNAPC4Q5SXM2 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.05□□□□□ -2.08
SNAPC4Q5SXM2 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SNAPC4Q5SXM2 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SNAPC4Q5SXM2 SNORA6-201ENST00000384033 151 ntBASIC2.04□□□□□ -2.08
SNAPC4Q5SXM2 RNU6-1005P-201ENST00000384519 107 ntBASIC2.04□□□□□ -2.08
SNAPC4Q5SXM2 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.04□□□□□ -2.08
SNAPC4Q5SXM2 FO393415.2-201ENST00000480085 343 ntBASIC2.04□□□□□ -2.08
SNAPC4Q5SXM2 RNU6-405P-201ENST00000516637 110 ntBASIC2.04□□□□□ -2.08
SNAPC4Q5SXM2 RNU6-467P-201ENST00000517027 110 ntBASIC2.04□□□□□ -2.08
SNAPC4Q5SXM2 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.04□□□□□ -2.08
SNAPC4Q5SXM2 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.04□□□□□ -2.08
SNAPC4Q5SXM2 AC245884.12-201ENST00000615364 59 ntBASIC2.04□□□□□ -2.08
SNAPC4Q5SXM2 AC073308.1-201ENST00000623696 305 ntBASIC2.04□□□□□ -2.08
SNAPC4Q5SXM2 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.04□□□□□ -2.08
SNAPC4Q5SXM2 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SNAPC4Q5SXM2 AC009902.3-201ENST00000606235 2172 ntBASIC2.04□□□□□ -2.08
SNAPC4Q5SXM2 AL137003.2-201ENST00000606924 2538 ntBASIC2.03□□□□□ -2.08
SNAPC4Q5SXM2 RNU6-251P-201ENST00000363235 104 ntBASIC2.03□□□□□ -2.08
SNAPC4Q5SXM2 RNU6-234P-201ENST00000365229 104 ntBASIC2.03□□□□□ -2.08
SNAPC4Q5SXM2 RNU4-72P-201ENST00000410754 173 ntBASIC2.03□□□□□ -2.08
SNAPC4Q5SXM2 AL512637.2-201ENST00000431287 1256 ntBASIC2.03□□□□□ -2.08
SNAPC4Q5SXM2 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.03□□□□□ -2.08
SNAPC4Q5SXM2 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.03□□□□□ -2.08
SNAPC4Q5SXM2 NDUFB4P2-201ENST00000509515 391 ntBASIC2.03□□□□□ -2.08
SNAPC4Q5SXM2 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC2.03□□□□□ -2.08
SNAPC4Q5SXM2 AC103710.4-201ENST00000609301 899 ntBASIC2.03□□□□□ -2.08
SNAPC4Q5SXM2 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.03□□□□□ -2.08
SNAPC4Q5SXM2 AL138955.1-201ENST00000622881 1040 ntBASIC2.03□□□□□ -2.08
SNAPC4Q5SXM2 OR5H6-203ENST00000642105 978 ntBASIC2.03□□□□□ -2.08
SNAPC4Q5SXM2 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.03□□□□□ -2.09
SNAPC4Q5SXM2 TMSB4XP8-201ENST00000402089 135 ntBASIC2.02□□□□□ -2.09
SNAPC4Q5SXM2 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.02□□□□□ -2.09
SNAPC4Q5SXM2 TMSB4XP6-201ENST00000415187 135 ntBASIC2.02□□□□□ -2.09
SNAPC4Q5SXM2 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.02□□□□□ -2.09
SNAPC4Q5SXM2 TMSB4XP1-201ENST00000424567 135 ntBASIC2.02□□□□□ -2.09
SNAPC4Q5SXM2 AC005345.1-201ENST00000431868 217 ntBASIC2.02□□□□□ -2.09
SNAPC4Q5SXM2 AC002542.1-201ENST00000440683 193 ntBASIC2.02□□□□□ -2.09
SNAPC4Q5SXM2 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.02□□□□□ -2.09
SNAPC4Q5SXM2 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.02□□□□□ -2.09
SNAPC4Q5SXM2 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.02□□□□□ -2.09
SNAPC4Q5SXM2 AC009127.3-201ENST00000570531 403 ntBASIC2.02□□□□□ -2.09
SNAPC4Q5SXM2 MIR6840-201ENST00000611937 71 ntBASIC2.02□□□□□ -2.09
SNAPC4Q5SXM2 AL163051.2-201ENST00000618976 735 ntBASIC2.02□□□□□ -2.09
SNAPC4Q5SXM2 AC080100.1-201ENST00000624239 5356 ntBASIC2.02□□□□□ -2.09
SNAPC4Q5SXM2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SNAPC4Q5SXM2 SGO1P1-201ENST00000603525 1447 ntBASIC2.02□□□□□ -2.09
SNAPC4Q5SXM2 HMGB1P5-201ENST00000255320 642 ntBASIC2.01□□□□□ -2.09
SNAPC4Q5SXM2 RNA5SP257-201ENST00000363023 116 ntBASIC2.01□□□□□ -2.09
SNAPC4Q5SXM2 SEPT2P1-201ENST00000419651 180 ntBASIC2.01□□□□□ -2.09
SNAPC4Q5SXM2 AC099548.1-201ENST00000421443 426 ntBASIC2.01□□□□□ -2.09
SNAPC4Q5SXM2 FGF7P5-201ENST00000441829 291 ntBASIC2.01□□□□□ -2.09
SNAPC4Q5SXM2 AL136380.1-201ENST00000447970 162 ntBASIC2.01□□□□□ -2.09
SNAPC4Q5SXM2 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
SNAPC4Q5SXM2 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.01□□□□□ -2.09
SNAPC4Q5SXM2 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.01□□□□□ -2.09
SNAPC4Q5SXM2 BZW1P2-201ENST00000473537 826 ntBASIC2.01□□□□□ -2.09
SNAPC4Q5SXM2 SETP7-201ENST00000552169 453 ntBASIC2.01□□□□□ -2.09
SNAPC4Q5SXM2 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.01□□□□□ -2.09
SNAPC4Q5SXM2 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SNAPC4Q5SXM2 Y_RNA.115-201ENST00000363272 98 ntBASIC2.01□□□□□ -2.09
SNAPC4Q5SXM2 ARF4P4-201ENST00000439608 520 ntBASIC2.01□□□□□ -2.09
SNAPC4Q5SXM2 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SNAPC4Q5SXM2 MTND2P6-201ENST00000455337 1030 ntBASIC2.01□□□□□ -2.09
SNAPC4Q5SXM2 AC078857.1-201ENST00000469870 667 ntBASIC2.01□□□□□ -2.09
SNAPC4Q5SXM2 RPL23AP41-201ENST00000484754 458 ntBASIC2.01□□□□□ -2.09
SNAPC4Q5SXM2 AC103833.1-201ENST00000517442 172 ntBASIC2.01□□□□□ -2.09
SNAPC4Q5SXM2 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.01□□□□□ -2.09
SNAPC4Q5SXM2 MTND4P27-201ENST00000450813 1354 ntBASIC2□□□□□ -2.09
SNAPC4Q5SXM2 MIR325-201ENST00000385260 98 ntBASIC2□□□□□ -2.09
SNAPC4Q5SXM2 U3.40-201ENST00000408706 208 ntBASIC2□□□□□ -2.09
SNAPC4Q5SXM2 TRIM60P5Y-201ENST00000413946 574 ntBASIC2□□□□□ -2.09
SNAPC4Q5SXM2 Z75741.2-201ENST00000417272 1167 ntBASIC2□□□□□ -2.09
SNAPC4Q5SXM2 RPS3AP44-201ENST00000425466 790 ntBASIC2□□□□□ -2.09
SNAPC4Q5SXM2 AL590383.1-201ENST00000428602 75 ntBASIC2□□□□□ -2.09
SNAPC4Q5SXM2 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2□□□□□ -2.09
SNAPC4Q5SXM2 MTND5P25-201ENST00000430499 799 ntBASIC2□□□□□ -2.09
SNAPC4Q5SXM2 Z80107.1-201ENST00000436830 412 ntBASIC2□□□□□ -2.09
SNAPC4Q5SXM2 THAP5P1-201ENST00000439089 262 ntBASIC2□□□□□ -2.09
SNAPC4Q5SXM2 PGBD4P3-201ENST00000440731 581 ntBASIC2□□□□□ -2.09
SNAPC4Q5SXM2 IPO7P1-201ENST00000442031 636 ntBASIC2□□□□□ -2.09
SNAPC4Q5SXM2 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2□□□□□ -2.09
SNAPC4Q5SXM2 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2□□□□□ -2.09
SNAPC4Q5SXM2 RPL32P14-201ENST00000463196 378 ntBASIC2□□□□□ -2.09
SNAPC4Q5SXM2 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2□□□□□ -2.09
SNAPC4Q5SXM2 COX7A2P2-201ENST00000505291 250 ntBASIC2□□□□□ -2.09
SNAPC4Q5SXM2 RNU5A-7P-201ENST00000515979 116 ntBASIC2□□□□□ -2.09
SNAPC4Q5SXM2 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2□□□□□ -2.09
SNAPC4Q5SXM2 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2□□□□□ -2.09
SNAPC4Q5SXM2 AC025594.3-201ENST00000613068 790 ntBASIC2□□□□□ -2.09
SNAPC4Q5SXM2 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2□□□□□ -2.09
SNAPC4Q5SXM2 AC006213.4-201ENST00000616184 634 ntBASIC2□□□□□ -2.09
SNAPC4Q5SXM2 AC022513.1-201ENST00000624512 117 ntBASIC2□□□□□ -2.09
SNAPC4Q5SXM2 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2□□□□□ -2.09
SNAPC4Q5SXM2 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
SNAPC4Q5SXM2 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
SNAPC4Q5SXM2 MIR373-201ENST00000362273 69 ntBASIC1.99□□□□□ -2.09
SNAPC4Q5SXM2 SNORA18.2-201ENST00000383865 132 ntBASIC1.99□□□□□ -2.09
SNAPC4Q5SXM2 MIR135A2-201ENST00000384854 100 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms