Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 AC083899.1-201ENST00000454465 3819 ntBASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 AL360270.2-201ENST00000562952 5985 ntBASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 RNA5SP123-201ENST00000363244 119 ntBASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 RNU6-1155P-201ENST00000363554 107 ntBASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 MIR10B-201ENST00000385011 110 ntBASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 EIF4A1P3-201ENST00000411521 244 ntBASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 BPY2DP-201ENST00000422208 265 ntBASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 IGKV2D-36-201ENST00000518643 226 ntBASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 AC084851.1-201ENST00000529105 249 ntBASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 HMGB1P14-201ENST00000557424 591 ntBASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 MIR3646-201ENST00000578301 84 ntBASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 AC069294.1-201ENST00000608397 350 ntBASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 AL360181.4-201ENST00000621752 134 ntBASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 AC004076.2-201ENST00000620532 3323 ntBASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.76□□□□□ -1.65
RNFT1Q5M7Z0 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 AC007390.2-201ENST00000606229 3803 ntBASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 ADAM24P-201ENST00000398655 2101 ntBASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 MAPK10-304ENST00000641341 3984 ntBASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 RNA5SP453-201ENST00000362503 119 ntBASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 RNU6-137P-201ENST00000363680 108 ntBASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 RNU6-336P-201ENST00000364891 107 ntBASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 RNU6-1286P-201ENST00000383871 107 ntBASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 MT-TC-201ENST00000387405 66 ntBASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 U3.22-201ENST00000391120 215 ntBASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 RPL21P67-201ENST00000402896 478 ntBASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 RNY4P30-201ENST00000410216 95 ntBASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 RNU2-43P-201ENST00000410306 190 ntBASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 RAB9AP3-201ENST00000412737 573 ntBASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 AL627311.1-201ENST00000431514 115 ntBASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 NDUFB4P8-201ENST00000435351 367 ntBASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 KNOP1P3-201ENST00000446933 426 ntBASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 RAB9AP1-201ENST00000449393 573 ntBASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 Y_RNA.651-201ENST00000459380 103 ntBASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 AC010265.1-201ENST00000513509 211 ntBASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 HIGD1AP3-201ENST00000515857 278 ntBASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 AC002545.1-201ENST00000592511 181 ntBASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 AC024153.1-201ENST00000603103 365 ntBASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 AC100827.5-201ENST00000615883 426 ntBASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 AL353743.1-202ENST00000431724 1695 ntBASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 AL034549.2-201ENST00000618285 3373 ntBASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC4.75□□□□□ -1.65
RNFT1Q5M7Z0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 SNORA51.8-201ENST00000384234 132 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms