Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.31□□□□□ -1.88
PDS5AQ29RF7 AL391646.1-201ENST00000603860 190 ntBASIC3.31□□□□□ -1.88
PDS5AQ29RF7 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
PDS5AQ29RF7 AC006338.1-201ENST00000618453 749 ntBASIC3.31□□□□□ -1.88
PDS5AQ29RF7 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
PDS5AQ29RF7 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
PDS5AQ29RF7 AL157700.1-201ENST00000561973 1432 ntBASIC3.31□□□□□ -1.88
PDS5AQ29RF7 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PDS5AQ29RF7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PDS5AQ29RF7 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PDS5AQ29RF7 Y_RNA.159-201ENST00000363674 87 ntBASIC3.3□□□□□ -1.88
PDS5AQ29RF7 RNU6-108P-201ENST00000365558 107 ntBASIC3.3□□□□□ -1.88
PDS5AQ29RF7 Y_RNA.372-201ENST00000365599 102 ntBASIC3.3□□□□□ -1.88
PDS5AQ29RF7 MIR591-201ENST00000385290 95 ntBASIC3.3□□□□□ -1.88
PDS5AQ29RF7 AL109755.1-201ENST00000401791 649 ntBASIC3.3□□□□□ -1.88
PDS5AQ29RF7 CIR1P3-201ENST00000405137 479 ntBASIC3.3□□□□□ -1.88
PDS5AQ29RF7 AL590002.1-201ENST00000406554 418 ntBASIC3.3□□□□□ -1.88
PDS5AQ29RF7 RNU4-65P-201ENST00000410473 140 ntBASIC3.3□□□□□ -1.88
PDS5AQ29RF7 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.3□□□□□ -1.88
PDS5AQ29RF7 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PDS5AQ29RF7 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.3□□□□□ -1.88
PDS5AQ29RF7 AC112220.1-201ENST00000434628 355 ntBASIC3.3□□□□□ -1.88
PDS5AQ29RF7 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.3□□□□□ -1.88
PDS5AQ29RF7 AL121871.1-201ENST00000443413 436 ntBASIC3.3□□□□□ -1.88
PDS5AQ29RF7 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PDS5AQ29RF7 RPL31P13-201ENST00000484151 370 ntBASIC3.3□□□□□ -1.88
PDS5AQ29RF7 ARL4AP2-201ENST00000507378 601 ntBASIC3.3□□□□□ -1.88
PDS5AQ29RF7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.3□□□□□ -1.88
PDS5AQ29RF7 RPL23AP94-201ENST00000512518 302 ntBASIC3.3□□□□□ -1.88
PDS5AQ29RF7 AC011979.2-201ENST00000527568 352 ntBASIC3.3□□□□□ -1.88
PDS5AQ29RF7 MTCYBP41-201ENST00000528913 1123 ntBASIC3.3□□□□□ -1.88
PDS5AQ29RF7 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.3□□□□□ -1.88
PDS5AQ29RF7 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.3□□□□□ -1.88
PDS5AQ29RF7 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.3□□□□□ -1.88
PDS5AQ29RF7 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.3□□□□□ -1.88
PDS5AQ29RF7 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.3□□□□□ -1.88
PDS5AQ29RF7 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.3□□□□□ -1.88
PDS5AQ29RF7 AL450472.3-201ENST00000615578 367 ntBASIC3.3□□□□□ -1.88
PDS5AQ29RF7 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.3□□□□□ -1.88
PDS5AQ29RF7 AL353748.2-201ENST00000622148 471 ntBASIC3.3□□□□□ -1.88
PDS5AQ29RF7 AC009161.2-201ENST00000624626 138 ntBASIC3.3□□□□□ -1.88
PDS5AQ29RF7 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
PDS5AQ29RF7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PDS5AQ29RF7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PDS5AQ29RF7 AC004925.1-201ENST00000624256 2706 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDS5AQ29RF7 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PDS5AQ29RF7 Y_RNA.9-201ENST00000362354 101 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 RNU6-511P-201ENST00000363496 107 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 RNU5E-8P-201ENST00000363502 116 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 SNORA51.4-201ENST00000364993 124 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PDS5AQ29RF7 BTF3P7-201ENST00000407097 488 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 RNU2-43P-201ENST00000410306 190 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 MTCO3P12-201ENST00000416718 547 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.29□□□□□ -1.88
PDS5AQ29RF7 AC090774.1-201ENST00000435925 246 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 AC005094.1-201ENST00000440420 368 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 RPL23AP20-201ENST00000447965 421 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 RPL23AP31-201ENST00000456160 467 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 RPS3P1-201ENST00000456781 192 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.29□□□□□ -1.88
PDS5AQ29RF7 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.29□□□□□ -1.88
PDS5AQ29RF7 RPS15AP36-201ENST00000492022 382 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 HMGB1P22-201ENST00000505315 124 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 AC114797.1-201ENST00000514003 728 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 RNU2-10P-201ENST00000516375 211 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 RNU2-58P-201ENST00000516403 183 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 RNU6-64P-201ENST00000517119 105 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 RNU6-1220P-201ENST00000517126 108 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.29□□□□□ -1.88
PDS5AQ29RF7 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.29□□□□□ -1.88
PDS5AQ29RF7 AC100870.1-201ENST00000522035 505 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 AP004371.1-201ENST00000525240 214 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.29□□□□□ -1.88
PDS5AQ29RF7 AC128657.1-201ENST00000549459 145 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.29□□□□□ -1.88
PDS5AQ29RF7 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.29□□□□□ -1.88
PDS5AQ29RF7 MIR4293-201ENST00000584305 78 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.29□□□□□ -1.88
PDS5AQ29RF7 AC012507.3-201ENST00000603556 477 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 AL035413.2-201ENST00000604801 525 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 AL136363.1-201ENST00000605349 337 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 AL136313.1-201ENST00000624804 202 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 ELF2P3-201ENST00000445099 1506 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 CR848007.1-201ENST00000442354 1699 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 DDX10P1-201ENST00000448545 1933 ntBASIC3.29□□□□□ -1.88
PDS5AQ29RF7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
PDS5AQ29RF7 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PDS5AQ29RF7 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
PDS5AQ29RF7 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PDS5AQ29RF7 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.28□□□□□ -1.88
PDS5AQ29RF7 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.28□□□□□ -1.88
PDS5AQ29RF7 SNORD56.2-201ENST00000363242 71 ntBASIC3.28□□□□□ -1.88
PDS5AQ29RF7 RNY4P14-201ENST00000363656 96 ntBASIC3.28□□□□□ -1.88
PDS5AQ29RF7 RNU6-1074P-201ENST00000383995 104 ntBASIC3.28□□□□□ -1.88
PDS5AQ29RF7 RNU6-882P-201ENST00000391025 103 ntBASIC3.28□□□□□ -1.88
PDS5AQ29RF7 SNORA11.2-201ENST00000408318 127 ntBASIC3.28□□□□□ -1.88
PDS5AQ29RF7 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PDS5AQ29RF7 RNU2-52P-201ENST00000410680 190 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms