Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSRP1Q08945 RNU6-395P-201ENST00000365662 106 ntBASIC4.41□□□□□ -1.7
SSRP1Q08945 RPL23AP48-201ENST00000406913 488 ntBASIC4.41□□□□□ -1.7
SSRP1Q08945 RNA5SP129-201ENST00000410276 118 ntBASIC4.41□□□□□ -1.7
SSRP1Q08945 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.41□□□□□ -1.7
SSRP1Q08945 AC074085.1-201ENST00000413598 418 ntBASIC4.41□□□□□ -1.7
SSRP1Q08945 SAR1AP4-201ENST00000429225 591 ntBASIC4.41□□□□□ -1.7
SSRP1Q08945 PIGFP3-201ENST00000441918 722 ntBASIC4.41□□□□□ -1.7
SSRP1Q08945 RPL21P104-201ENST00000464143 478 ntBASIC4.41□□□□□ -1.7
SSRP1Q08945 AC087884.1-201ENST00000469738 328 ntBASIC4.41□□□□□ -1.7
SSRP1Q08945 BTF3L4P4-201ENST00000506381 449 ntBASIC4.41□□□□□ -1.7
SSRP1Q08945 VWA8P1-201ENST00000510889 176 ntBASIC4.41□□□□□ -1.7
SSRP1Q08945 RNA5SP208-201ENST00000516156 78 ntBASIC4.41□□□□□ -1.7
SSRP1Q08945 RNU2-58P-201ENST00000516403 183 ntBASIC4.41□□□□□ -1.7
SSRP1Q08945 Y_RNA.701-201ENST00000516812 110 ntBASIC4.41□□□□□ -1.7
SSRP1Q08945 AP003122.3-201ENST00000526316 255 ntBASIC4.41□□□□□ -1.7
SSRP1Q08945 AC084851.1-201ENST00000529105 249 ntBASIC4.41□□□□□ -1.7
SSRP1Q08945 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.41□□□□□ -1.7
SSRP1Q08945 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.41□□□□□ -1.7
SSRP1Q08945 CYCSP30-201ENST00000546447 172 ntBASIC4.41□□□□□ -1.7
SSRP1Q08945 MIR4790-201ENST00000577799 79 ntBASIC4.41□□□□□ -1.7
SSRP1Q08945 AC245389.1-201ENST00000605141 529 ntBASIC4.41□□□□□ -1.7
SSRP1Q08945 MIR486-1-201ENST00000612171 68 ntBASIC4.41□□□□□ -1.7
SSRP1Q08945 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.41□□□□□ -1.7
SSRP1Q08945 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSRP1Q08945 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.41□□□□□ -1.7
SSRP1Q08945 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSRP1Q08945 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.41□□□□□ -1.7
SSRP1Q08945 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.7
SSRP1Q08945 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
SSRP1Q08945 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.4□□□□□ -1.7
SSRP1Q08945 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
SSRP1Q08945 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.4□□□□□ -1.7
SSRP1Q08945 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.4□□□□□ -1.7
SSRP1Q08945 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
SSRP1Q08945 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SSRP1Q08945 FRG1CP-201ENST00000358464 769 ntBASIC4.4□□□□□ -1.71
SSRP1Q08945 Y_RNA.135-201ENST00000363439 95 ntBASIC4.4□□□□□ -1.71
SSRP1Q08945 RNU6-266P-201ENST00000364225 107 ntBASIC4.4□□□□□ -1.71
SSRP1Q08945 RNU6-1303P-201ENST00000364841 107 ntBASIC4.4□□□□□ -1.71
SSRP1Q08945 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.4□□□□□ -1.71
SSRP1Q08945 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.4□□□□□ -1.71
SSRP1Q08945 MIR30B-201ENST00000384850 88 ntBASIC4.4□□□□□ -1.71
SSRP1Q08945 MIR493-201ENST00000385254 89 ntBASIC4.4□□□□□ -1.71
SSRP1Q08945 SNORA57.1-201ENST00000391227 145 ntBASIC4.4□□□□□ -1.71
SSRP1Q08945 RN7SKP263-201ENST00000411194 309 ntBASIC4.4□□□□□ -1.71
SSRP1Q08945 CRYBB2P1-203ENST00000415709 538 ntBASIC4.4□□□□□ -1.71
SSRP1Q08945 KC877373.1-201ENST00000479066 408 ntBASIC4.4□□□□□ -1.71
SSRP1Q08945 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.4□□□□□ -1.71
SSRP1Q08945 AC008716.1-201ENST00000511084 513 ntBASIC4.4□□□□□ -1.71
SSRP1Q08945 SCARNA14-201ENST00000516903 136 ntBASIC4.4□□□□□ -1.71
SSRP1Q08945 RN7SKP289-201ENST00000517244 295 ntBASIC4.4□□□□□ -1.71
SSRP1Q08945 COPS8P3-201ENST00000526024 482 ntBASIC4.4□□□□□ -1.71
SSRP1Q08945 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SSRP1Q08945 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.4□□□□□ -1.71
SSRP1Q08945 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.4□□□□□ -1.71
SSRP1Q08945 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.4□□□□□ -1.71
SSRP1Q08945 TRAV28-201ENST00000557548 323 ntBASIC4.4□□□□□ -1.71
SSRP1Q08945 AL360157.1-201ENST00000565962 87 ntBASIC4.4□□□□□ -1.71
SSRP1Q08945 RN7SL703P-201ENST00000578485 302 ntBASIC4.4□□□□□ -1.71
SSRP1Q08945 AC138761.3-201ENST00000579993 334 ntBASIC4.4□□□□□ -1.71
SSRP1Q08945 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.4□□□□□ -1.71
SSRP1Q08945 SNORA62.6-201ENST00000606322 83 ntBASIC4.4□□□□□ -1.71
SSRP1Q08945 AC002044.1-201ENST00000606707 158 ntBASIC4.4□□□□□ -1.71
SSRP1Q08945 AL138726.1-201ENST00000614873 333 ntBASIC4.4□□□□□ -1.71
SSRP1Q08945 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.4□□□□□ -1.71
SSRP1Q08945 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.4□□□□□ -1.71
SSRP1Q08945 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.4□□□□□ -1.71
SSRP1Q08945 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.4□□□□□ -1.71
SSRP1Q08945 PNPT1P2-201ENST00000456768 2050 ntBASIC4.4□□□□□ -1.71
SSRP1Q08945 AC007785.2-201ENST00000598627 1916 ntBASIC4.4□□□□□ -1.71
SSRP1Q08945 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SSRP1Q08945 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.4□□□□□ -1.71
SSRP1Q08945 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SSRP1Q08945 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SSRP1Q08945 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SSRP1Q08945 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSRP1Q08945 Y_RNA.33-201ENST00000362591 102 ntBASIC4.39□□□□□ -1.71
SSRP1Q08945 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.39□□□□□ -1.71
SSRP1Q08945 DEFB109C-201ENST00000382575 264 ntBASIC4.39□□□□□ -1.71
SSRP1Q08945 DEFB109B-201ENST00000382656 264 ntBASIC4.39□□□□□ -1.71
SSRP1Q08945 SNORD116-11-201ENST00000383882 92 ntBASIC4.39□□□□□ -1.71
SSRP1Q08945 RNU6-128P-201ENST00000383976 107 ntBASIC4.39□□□□□ -1.71
SSRP1Q08945 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SSRP1Q08945 AL158156.1-201ENST00000422509 473 ntBASIC4.39□□□□□ -1.71
SSRP1Q08945 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.39□□□□□ -1.71
SSRP1Q08945 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.39□□□□□ -1.71
SSRP1Q08945 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.39□□□□□ -1.71
SSRP1Q08945 AC008526.1-201ENST00000509149 338 ntBASIC4.39□□□□□ -1.71
SSRP1Q08945 MTND3P25-201ENST00000509243 135 ntBASIC4.39□□□□□ -1.71
SSRP1Q08945 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.39□□□□□ -1.71
SSRP1Q08945 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.39□□□□□ -1.71
SSRP1Q08945 RNU6-559P-201ENST00000516151 98 ntBASIC4.39□□□□□ -1.71
SSRP1Q08945 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.39□□□□□ -1.71
SSRP1Q08945 RNU6-323P-201ENST00000521915 107 ntBASIC4.39□□□□□ -1.71
SSRP1Q08945 AP005639.2-201ENST00000527592 928 ntBASIC4.39□□□□□ -1.71
SSRP1Q08945 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.39□□□□□ -1.71
SSRP1Q08945 HSPE1P5-201ENST00000561489 272 ntBASIC4.39□□□□□ -1.71
SSRP1Q08945 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.39□□□□□ -1.71
SSRP1Q08945 AC007151.1-201ENST00000572774 483 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms