Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC008571.1-201ENST00000467232 300 ntBASIC2.73□□□□□ -1.97
SCN1BQ07699 AC090096.1-201ENST00000489168 390 ntBASIC2.73□□□□□ -1.97
SCN1BQ07699 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.73□□□□□ -1.97
SCN1BQ07699 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.73□□□□□ -1.97
SCN1BQ07699 RPPH1-2P-201ENST00000516688 293 ntBASIC2.73□□□□□ -1.97
SCN1BQ07699 RNU6-826P-201ENST00000516827 104 ntBASIC2.73□□□□□ -1.97
SCN1BQ07699 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.73□□□□□ -1.97
SCN1BQ07699 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.73□□□□□ -1.97
SCN1BQ07699 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.73□□□□□ -1.97
SCN1BQ07699 AC007458.1-201ENST00000542812 373 ntBASIC2.73□□□□□ -1.97
SCN1BQ07699 MIR1273C-201ENST00000578669 77 ntBASIC2.73□□□□□ -1.97
SCN1BQ07699 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.73□□□□□ -1.97
SCN1BQ07699 MIR3199-1-201ENST00000582434 88 ntBASIC2.73□□□□□ -1.97
SCN1BQ07699 AL645944.1-201ENST00000603857 493 ntBASIC2.73□□□□□ -1.97
SCN1BQ07699 AC068276.1-201ENST00000605793 379 ntBASIC2.73□□□□□ -1.97
SCN1BQ07699 MIR6798-201ENST00000612887 67 ntBASIC2.73□□□□□ -1.97
SCN1BQ07699 AC012409.4-201ENST00000612923 249 ntBASIC2.73□□□□□ -1.97
SCN1BQ07699 AL359547.2-201ENST00000615810 418 ntBASIC2.73□□□□□ -1.97
SCN1BQ07699 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.73□□□□□ -1.97
SCN1BQ07699 Z99129.2-201ENST00000619967 314 ntBASIC2.73□□□□□ -1.97
SCN1BQ07699 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
SCN1BQ07699 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
SCN1BQ07699 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SCN1BQ07699 ASNSP3-201ENST00000451989 1306 ntBASIC2.72□□□□□ -1.97
SCN1BQ07699 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
SCN1BQ07699 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.72□□□□□ -1.97
SCN1BQ07699 FGF7P2-201ENST00000332473 296 ntBASIC2.72□□□□□ -1.97
SCN1BQ07699 Y_RNA.22-201ENST00000362492 102 ntBASIC2.72□□□□□ -1.97
SCN1BQ07699 RNU6-898P-201ENST00000365627 104 ntBASIC2.72□□□□□ -1.97
SCN1BQ07699 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SCN1BQ07699 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SCN1BQ07699 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
SCN1BQ07699 SNORA40C-201ENST00000391285 128 ntBASIC2.72□□□□□ -1.97
SCN1BQ07699 AL357075.1-201ENST00000404107 726 ntBASIC2.72□□□□□ -1.97
SCN1BQ07699 AL451074.5-201ENST00000415894 435 ntBASIC2.72□□□□□ -1.97
SCN1BQ07699 PTGES3P4-201ENST00000426243 356 ntBASIC2.72□□□□□ -1.97
SCN1BQ07699 ISCA1P6-201ENST00000427740 390 ntBASIC2.72□□□□□ -1.97
SCN1BQ07699 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.72□□□□□ -1.97
SCN1BQ07699 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.72□□□□□ -1.97
SCN1BQ07699 RPL21P133-201ENST00000443666 476 ntBASIC2.72□□□□□ -1.97
SCN1BQ07699 AC104389.3-201ENST00000445629 235 ntBASIC2.72□□□□□ -1.97
SCN1BQ07699 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.72□□□□□ -1.97
SCN1BQ07699 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.72□□□□□ -1.97
SCN1BQ07699 Vault.3-201ENST00000516676 95 ntBASIC2.72□□□□□ -1.97
SCN1BQ07699 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.72□□□□□ -1.97
SCN1BQ07699 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.72□□□□□ -1.97
SCN1BQ07699 AC012414.6-201ENST00000568241 401 ntBASIC2.72□□□□□ -1.97
SCN1BQ07699 AC008121.1-201ENST00000603244 268 ntBASIC2.72□□□□□ -1.97
SCN1BQ07699 AL109618.2-201ENST00000605527 211 ntBASIC2.72□□□□□ -1.97
SCN1BQ07699 AC126118.1-201ENST00000607744 628 ntBASIC2.72□□□□□ -1.97
SCN1BQ07699 MIR6134-201ENST00000617606 109 ntBASIC2.72□□□□□ -1.97
SCN1BQ07699 AC024940.5-201ENST00000622889 474 ntBASIC2.72□□□□□ -1.97
SCN1BQ07699 AC019226.2-201ENST00000625973 424 ntBASIC2.72□□□□□ -1.97
SCN1BQ07699 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SCN1BQ07699 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SCN1BQ07699 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SCN1BQ07699 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
SCN1BQ07699 TEX21P-201ENST00000447107 1476 ntBASIC2.71□□□□□ -1.97
SCN1BQ07699 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
SCN1BQ07699 RNU6-395P-201ENST00000365662 106 ntBASIC2.71□□□□□ -1.98
SCN1BQ07699 SNORA75B-201ENST00000384053 137 ntBASIC2.71□□□□□ -1.98
SCN1BQ07699 SNORA24.1-201ENST00000384401 135 ntBASIC2.71□□□□□ -1.98
SCN1BQ07699 CISD1P1-201ENST00000393907 327 ntBASIC2.71□□□□□ -1.98
SCN1BQ07699 AL590004.2-201ENST00000404787 371 ntBASIC2.71□□□□□ -1.98
SCN1BQ07699 AC063979.1-201ENST00000415539 377 ntBASIC2.71□□□□□ -1.98
SCN1BQ07699 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.71□□□□□ -1.98
SCN1BQ07699 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.71□□□□□ -1.98
SCN1BQ07699 MYL8P-204ENST00000431574 518 ntBASIC2.71□□□□□ -1.98
SCN1BQ07699 CETN4P-201ENST00000432407 469 ntBASIC2.71□□□□□ -1.98
SCN1BQ07699 AL033528.1-201ENST00000453780 140 ntBASIC2.71□□□□□ -1.98
SCN1BQ07699 snoU109.1-201ENST00000459339 135 ntBASIC2.71□□□□□ -1.98
SCN1BQ07699 RPL21P41-201ENST00000459863 264 ntBASIC2.71□□□□□ -1.98
SCN1BQ07699 AP001324.2-201ENST00000461163 319 ntBASIC2.71□□□□□ -1.98
SCN1BQ07699 FAM92A1P2-202ENST00000504766 877 ntBASIC2.71□□□□□ -1.98
SCN1BQ07699 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.71□□□□□ -1.98
SCN1BQ07699 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.71□□□□□ -1.98
SCN1BQ07699 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.71□□□□□ -1.98
SCN1BQ07699 AC023141.11-201ENST00000508864 202 ntBASIC2.71□□□□□ -1.98
SCN1BQ07699 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.71□□□□□ -1.98
SCN1BQ07699 AC117522.1-201ENST00000509821 380 ntBASIC2.71□□□□□ -1.98
SCN1BQ07699 AC091826.1-201ENST00000514065 313 ntBASIC2.71□□□□□ -1.98
SCN1BQ07699 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.71□□□□□ -1.98
SCN1BQ07699 RNU6-123P-201ENST00000516163 102 ntBASIC2.71□□□□□ -1.98
SCN1BQ07699 SCARNA24.1-201ENST00000516465 137 ntBASIC2.71□□□□□ -1.98
SCN1BQ07699 ADI1P3-201ENST00000549509 470 ntBASIC2.71□□□□□ -1.98
SCN1BQ07699 AC106782.4-201ENST00000568264 210 ntBASIC2.71□□□□□ -1.98
SCN1BQ07699 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.71□□□□□ -1.98
SCN1BQ07699 MIR3682-201ENST00000581338 84 ntBASIC2.71□□□□□ -1.98
SCN1BQ07699 CLIC4P2-201ENST00000601934 717 ntBASIC2.71□□□□□ -1.98
SCN1BQ07699 ATP1B3P1-201ENST00000605365 821 ntBASIC2.71□□□□□ -1.98
SCN1BQ07699 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.71□□□□□ -1.98
SCN1BQ07699 CDC27P3-201ENST00000635418 1910 ntBASIC2.71□□□□□ -1.98
SCN1BQ07699 MTCO1P12-201ENST00000414273 1543 ntBASIC2.71□□□□□ -1.98
SCN1BQ07699 AC010329.5-201ENST00000623497 2174 ntBASIC2.71□□□□□ -1.98
SCN1BQ07699 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SCN1BQ07699 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
SCN1BQ07699 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SCN1BQ07699 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SCN1BQ07699 U3.4-201ENST00000363352 213 ntBASIC2.7□□□□□ -1.98
SCN1BQ07699 RNU6-1280P-201ENST00000365211 107 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms