Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 Z82210.1-201ENST00000440037 231 ntBASIC2.8□□□□□ -1.96
GABPAQ06546 COX6CP12-201ENST00000446748 202 ntBASIC2.8□□□□□ -1.96
GABPAQ06546 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.8□□□□□ -1.96
GABPAQ06546 SETP11-201ENST00000473027 690 ntBASIC2.8□□□□□ -1.96
GABPAQ06546 RPS20P22-201ENST00000473700 357 ntBASIC2.8□□□□□ -1.96
GABPAQ06546 ANXA2P1-201ENST00000505539 926 ntBASIC2.8□□□□□ -1.96
GABPAQ06546 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.8□□□□□ -1.96
GABPAQ06546 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.8□□□□□ -1.96
GABPAQ06546 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.8□□□□□ -1.96
GABPAQ06546 AC009063.1-201ENST00000563342 702 ntBASIC2.8□□□□□ -1.96
GABPAQ06546 AMZ2P1-203ENST00000565833 850 ntBASIC2.8□□□□□ -1.96
GABPAQ06546 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.8□□□□□ -1.96
GABPAQ06546 MTCO3P13-201ENST00000577757 781 ntBASIC2.8□□□□□ -1.96
GABPAQ06546 AC092354.1-201ENST00000606057 376 ntBASIC2.8□□□□□ -1.96
GABPAQ06546 AL031775.1-201ENST00000607014 887 ntBASIC2.8□□□□□ -1.96
GABPAQ06546 AC104010.1-201ENST00000616889 150 ntBASIC2.8□□□□□ -1.96
GABPAQ06546 AC073308.1-201ENST00000623696 305 ntBASIC2.8□□□□□ -1.96
GABPAQ06546 AP003122.6-201ENST00000623831 495 ntBASIC2.8□□□□□ -1.96
GABPAQ06546 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
GABPAQ06546 MTND1P37-201ENST00000636562 264 ntBASIC2.8□□□□□ -1.96
GABPAQ06546 SNORD114-30-201ENST00000364448 72 ntBASIC2.79□□□□□ -1.96
GABPAQ06546 RNU6-198P-201ENST00000384258 104 ntBASIC2.79□□□□□ -1.96
GABPAQ06546 FCF1P10-201ENST00000407590 479 ntBASIC2.79□□□□□ -1.96
GABPAQ06546 RN7SKP223-201ENST00000410582 62 ntBASIC2.79□□□□□ -1.96
GABPAQ06546 ATG3P1-201ENST00000419507 911 ntBASIC2.79□□□□□ -1.96
GABPAQ06546 SAR1AP4-201ENST00000429225 591 ntBASIC2.79□□□□□ -1.96
GABPAQ06546 RPL21P2-201ENST00000440049 481 ntBASIC2.79□□□□□ -1.96
GABPAQ06546 BNIP3P2-201ENST00000441221 577 ntBASIC2.79□□□□□ -1.96
GABPAQ06546 AC020550.1-201ENST00000447385 163 ntBASIC2.79□□□□□ -1.96
GABPAQ06546 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.79□□□□□ -1.96
GABPAQ06546 USP9YP12-201ENST00000450481 570 ntBASIC2.79□□□□□ -1.96
GABPAQ06546 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.79□□□□□ -1.96
GABPAQ06546 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.79□□□□□ -1.96
GABPAQ06546 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.79□□□□□ -1.96
GABPAQ06546 RPS27AP9-201ENST00000477681 438 ntBASIC2.79□□□□□ -1.96
GABPAQ06546 BET1P1-201ENST00000482276 359 ntBASIC2.79□□□□□ -1.96
GABPAQ06546 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.79□□□□□ -1.96
GABPAQ06546 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.79□□□□□ -1.96
GABPAQ06546 RNA5SP281-201ENST00000516504 135 ntBASIC2.79□□□□□ -1.96
GABPAQ06546 RNU6-56P-201ENST00000516986 93 ntBASIC2.79□□□□□ -1.96
GABPAQ06546 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.79□□□□□ -1.96
GABPAQ06546 ATP5F1P5-201ENST00000526403 760 ntBASIC2.79□□□□□ -1.96
GABPAQ06546 OR5BN1P-201ENST00000532955 829 ntBASIC2.79□□□□□ -1.96
GABPAQ06546 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.79□□□□□ -1.96
GABPAQ06546 DNAJC8P1-201ENST00000554535 372 ntBASIC2.79□□□□□ -1.96
GABPAQ06546 AC068135.2-201ENST00000569293 1028 ntBASIC2.79□□□□□ -1.96
GABPAQ06546 MIR3118-1-201ENST00000581787 76 ntBASIC2.79□□□□□ -1.96
GABPAQ06546 MIR5007-201ENST00000583098 95 ntBASIC2.79□□□□□ -1.96
GABPAQ06546 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.79□□□□□ -1.96
GABPAQ06546 NUTF2P8-201ENST00000604593 363 ntBASIC2.79□□□□□ -1.96
GABPAQ06546 AC078883.4-201ENST00000623218 367 ntBASIC2.79□□□□□ -1.96
GABPAQ06546 AC019226.2-201ENST00000625973 424 ntBASIC2.79□□□□□ -1.96
GABPAQ06546 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
GABPAQ06546 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
GABPAQ06546 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
GABPAQ06546 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
GABPAQ06546 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.78□□□□□ -1.96
GABPAQ06546 RNU6-140P-201ENST00000384566 108 ntBASIC2.78□□□□□ -1.96
GABPAQ06546 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
GABPAQ06546 MIR1261-201ENST00000408659 82 ntBASIC2.78□□□□□ -1.96
GABPAQ06546 AC099548.1-201ENST00000421443 426 ntBASIC2.78□□□□□ -1.96
GABPAQ06546 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.78□□□□□ -1.96
GABPAQ06546 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.78□□□□□ -1.96
GABPAQ06546 AL356583.2-201ENST00000426536 280 ntBASIC2.78□□□□□ -1.96
GABPAQ06546 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.78□□□□□ -1.96
GABPAQ06546 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.78□□□□□ -1.96
GABPAQ06546 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.78□□□□□ -1.96
GABPAQ06546 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
GABPAQ06546 SSXP1-201ENST00000453640 473 ntBASIC2.78□□□□□ -1.96
GABPAQ06546 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.78□□□□□ -1.96
GABPAQ06546 MTND4LP3-201ENST00000468320 276 ntBASIC2.78□□□□□ -1.96
GABPAQ06546 RN7SL499P-201ENST00000481141 276 ntBASIC2.78□□□□□ -1.96
GABPAQ06546 AL160314.1-201ENST00000490836 438 ntBASIC2.78□□□□□ -1.96
GABPAQ06546 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.78□□□□□ -1.96
GABPAQ06546 AC107934.1-201ENST00000522215 217 ntBASIC2.78□□□□□ -1.96
GABPAQ06546 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.78□□□□□ -1.96
GABPAQ06546 MRPS36P5-201ENST00000551909 298 ntBASIC2.78□□□□□ -1.96
GABPAQ06546 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.78□□□□□ -1.96
GABPAQ06546 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.78□□□□□ -1.96
GABPAQ06546 AL359999.1-201ENST00000604513 294 ntBASIC2.78□□□□□ -1.96
GABPAQ06546 AL161729.4-201ENST00000604650 476 ntBASIC2.78□□□□□ -1.96
GABPAQ06546 AP000860.1-201ENST00000605250 559 ntBASIC2.78□□□□□ -1.96
GABPAQ06546 AC012360.2-201ENST00000609349 391 ntBASIC2.78□□□□□ -1.96
GABPAQ06546 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.78□□□□□ -1.96
GABPAQ06546 AC006338.1-201ENST00000618453 749 ntBASIC2.78□□□□□ -1.96
GABPAQ06546 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
GABPAQ06546 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.78□□□□□ -1.96
GABPAQ06546 RNU6-799P-201ENST00000363567 107 ntBASIC2.77□□□□□ -1.97
GABPAQ06546 RNU6-1284P-201ENST00000363701 100 ntBASIC2.77□□□□□ -1.97
GABPAQ06546 MT-TH-201ENST00000387441 69 ntBASIC2.77□□□□□ -1.97
GABPAQ06546 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
GABPAQ06546 SNORD115.1-201ENST00000391109 76 ntBASIC2.77□□□□□ -1.97
GABPAQ06546 SNORA26.7-201ENST00000391288 122 ntBASIC2.77□□□□□ -1.97
GABPAQ06546 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.77□□□□□ -1.97
GABPAQ06546 BTF3P7-201ENST00000407097 488 ntBASIC2.77□□□□□ -1.97
GABPAQ06546 RNU2-33P-201ENST00000410344 192 ntBASIC2.77□□□□□ -1.97
GABPAQ06546 Y_RNA.608-201ENST00000410647 95 ntBASIC2.77□□□□□ -1.97
GABPAQ06546 RN7SKP192-201ENST00000411291 327 ntBASIC2.77□□□□□ -1.97
GABPAQ06546 RPL17P12-201ENST00000413391 526 ntBASIC2.77□□□□□ -1.97
GABPAQ06546 RPS15AP12-201ENST00000419498 388 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms