Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
CDK3Q00526 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.98□□□□□ -1.93
CDK3Q00526 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.98□□□□□ -1.93
CDK3Q00526 AC108078.2-201ENST00000510750 236 ntBASIC2.98□□□□□ -1.93
CDK3Q00526 AC010493.1-201ENST00000513479 292 ntBASIC2.98□□□□□ -1.93
CDK3Q00526 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.98□□□□□ -1.93
CDK3Q00526 Y_RNA.689-201ENST00000516589 107 ntBASIC2.98□□□□□ -1.93
CDK3Q00526 AP003072.2-201ENST00000527756 676 ntBASIC2.98□□□□□ -1.93
CDK3Q00526 AC068587.5-201ENST00000528506 175 ntBASIC2.98□□□□□ -1.93
CDK3Q00526 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.98□□□□□ -1.93
CDK3Q00526 TRAV37-201ENST00000553906 342 ntBASIC2.98□□□□□ -1.93
CDK3Q00526 SUB1P2-201ENST00000556401 297 ntBASIC2.98□□□□□ -1.93
CDK3Q00526 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.98□□□□□ -1.93
CDK3Q00526 AC068135.2-201ENST00000569293 1028 ntBASIC2.98□□□□□ -1.93
CDK3Q00526 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.98□□□□□ -1.93
CDK3Q00526 AC004805.2-201ENST00000605382 482 ntBASIC2.98□□□□□ -1.93
CDK3Q00526 AC107294.3-201ENST00000609211 526 ntBASIC2.98□□□□□ -1.93
CDK3Q00526 FTX_3.1-201ENST00000610451 147 ntBASIC2.98□□□□□ -1.93
CDK3Q00526 AC138649.3-201ENST00000622154 254 ntBASIC2.98□□□□□ -1.93
CDK3Q00526 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
CDK3Q00526 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CDK3Q00526 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.97□□□□□ -1.93
CDK3Q00526 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CDK3Q00526 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.97□□□□□ -1.93
CDK3Q00526 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.97□□□□□ -1.93
CDK3Q00526 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.97□□□□□ -1.93
CDK3Q00526 SNORA14A-201ENST00000364773 135 ntBASIC2.97□□□□□ -1.93
CDK3Q00526 Y_RNA.367-201ENST00000365544 101 ntBASIC2.97□□□□□ -1.93
CDK3Q00526 RNU6-805P-201ENST00000365643 106 ntBASIC2.97□□□□□ -1.93
CDK3Q00526 Y_RNA.517-201ENST00000384551 106 ntBASIC2.97□□□□□ -1.93
CDK3Q00526 MIR1-2-201ENST00000384961 85 ntBASIC2.97□□□□□ -1.93
CDK3Q00526 GSTA9P-201ENST00000406231 611 ntBASIC2.97□□□□□ -1.93
CDK3Q00526 AL354719.1-201ENST00000406535 843 ntBASIC2.97□□□□□ -1.93
CDK3Q00526 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.97□□□□□ -1.93
CDK3Q00526 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.97□□□□□ -1.93
CDK3Q00526 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.97□□□□□ -1.93
CDK3Q00526 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.97□□□□□ -1.93
CDK3Q00526 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.97□□□□□ -1.93
CDK3Q00526 ISCA1P1-201ENST00000426679 387 ntBASIC2.97□□□□□ -1.93
CDK3Q00526 SNRPEP9-201ENST00000436794 238 ntBASIC2.97□□□□□ -1.93
CDK3Q00526 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.97□□□□□ -1.93
CDK3Q00526 RPS24P13-201ENST00000442520 397 ntBASIC2.97□□□□□ -1.93
CDK3Q00526 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.97□□□□□ -1.93
CDK3Q00526 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.97□□□□□ -1.93
CDK3Q00526 AC126389.1-201ENST00000477436 290 ntBASIC2.97□□□□□ -1.93
CDK3Q00526 RPS3AP14-201ENST00000483907 780 ntBASIC2.97□□□□□ -1.93
CDK3Q00526 AC023194.1-201ENST00000493084 308 ntBASIC2.97□□□□□ -1.93
CDK3Q00526 AC091435.1-201ENST00000505442 584 ntBASIC2.97□□□□□ -1.93
CDK3Q00526 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.97□□□□□ -1.93
CDK3Q00526 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.97□□□□□ -1.93
CDK3Q00526 Y_RNA.655-201ENST00000515919 96 ntBASIC2.97□□□□□ -1.93
CDK3Q00526 RNA5SP165-201ENST00000517142 115 ntBASIC2.97□□□□□ -1.93
CDK3Q00526 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.97□□□□□ -1.93
CDK3Q00526 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.97□□□□□ -1.93
CDK3Q00526 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.97□□□□□ -1.93
CDK3Q00526 AP001646.1-201ENST00000527936 915 ntBASIC2.97□□□□□ -1.93
CDK3Q00526 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.97□□□□□ -1.93
CDK3Q00526 AC174048.1-201ENST00000603389 144 ntBASIC2.97□□□□□ -1.93
CDK3Q00526 BNIP3P9-201ENST00000603714 553 ntBASIC2.97□□□□□ -1.93
CDK3Q00526 AC022893.3-201ENST00000607665 437 ntBASIC2.97□□□□□ -1.93
CDK3Q00526 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CDK3Q00526 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.97□□□□□ -1.93
CDK3Q00526 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.97□□□□□ -1.93
CDK3Q00526 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.97□□□□□ -1.93
CDK3Q00526 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.97□□□□□ -1.93
CDK3Q00526 API5P2-201ENST00000397055 1498 ntBASIC2.96□□□□□ -1.93
CDK3Q00526 MTND5P27-201ENST00000428871 1720 ntBASIC2.96□□□□□ -1.93
CDK3Q00526 AC233263.6-201ENST00000631132 1963 ntBASIC2.96□□□□□ -1.94
CDK3Q00526 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.96□□□□□ -1.94
CDK3Q00526 RNU6-179P-201ENST00000363350 107 ntBASIC2.96□□□□□ -1.94
CDK3Q00526 RNU6-259P-201ENST00000383999 107 ntBASIC2.96□□□□□ -1.94
CDK3Q00526 RNU6-74P-201ENST00000384235 107 ntBASIC2.96□□□□□ -1.94
CDK3Q00526 RNU6-198P-201ENST00000384258 104 ntBASIC2.96□□□□□ -1.94
CDK3Q00526 SNORD116-4-201ENST00000384733 96 ntBASIC2.96□□□□□ -1.94
CDK3Q00526 RPL5P18-201ENST00000406671 891 ntBASIC2.96□□□□□ -1.94
CDK3Q00526 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CDK3Q00526 AC022018.1-201ENST00000430685 241 ntBASIC2.96□□□□□ -1.94
CDK3Q00526 RPL36AP53-201ENST00000432891 316 ntBASIC2.96□□□□□ -1.94
CDK3Q00526 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.96□□□□□ -1.94
CDK3Q00526 AL451074.3-201ENST00000437709 472 ntBASIC2.96□□□□□ -1.94
CDK3Q00526 FABP5P15-201ENST00000453566 214 ntBASIC2.96□□□□□ -1.94
CDK3Q00526 MTND2P33-201ENST00000506452 1031 ntBASIC2.96□□□□□ -1.94
CDK3Q00526 RNU6-143P-201ENST00000516942 93 ntBASIC2.96□□□□□ -1.94
CDK3Q00526 MTCYBP20-201ENST00000524239 1129 ntBASIC2.96□□□□□ -1.94
CDK3Q00526 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.96□□□□□ -1.94
CDK3Q00526 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.96□□□□□ -1.94
CDK3Q00526 AC024619.4-201ENST00000580924 316 ntBASIC2.96□□□□□ -1.94
CDK3Q00526 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.96□□□□□ -1.94
CDK3Q00526 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.96□□□□□ -1.94
CDK3Q00526 AL158032.1-201ENST00000605401 106 ntBASIC2.96□□□□□ -1.94
CDK3Q00526 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CDK3Q00526 AC007318.2-201ENST00000620999 243 ntBASIC2.96□□□□□ -1.94
CDK3Q00526 AC093648.1-201ENST00000623546 606 ntBASIC2.96□□□□□ -1.94
CDK3Q00526 AC009161.2-201ENST00000624626 138 ntBASIC2.96□□□□□ -1.94
CDK3Q00526 MTND5P26-201ENST00000426018 1752 ntBASIC2.96□□□□□ -1.94
CDK3Q00526 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.96□□□□□ -1.94
CDK3Q00526 SRP72P2-201ENST00000344851 1979 ntBASIC2.96□□□□□ -1.94
CDK3Q00526 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CDK3Q00526 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
CDK3Q00526 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms