Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 BNIP3P4-201ENST00000604946 565 ntBASIC0.99□□□□□ -2.25
UBA52P62987 AC069294.1-201ENST00000608397 350 ntBASIC0.99□□□□□ -2.25
UBA52P62987 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.99□□□□□ -2.25
UBA52P62987 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC0.99□□□□□ -2.25
UBA52P62987 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
UBA52P62987 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
UBA52P62987 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.98□□□□□ -2.25
UBA52P62987 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.98□□□□□ -2.25
UBA52P62987 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
UBA52P62987 SNORA22-201ENST00000383907 134 ntBASIC0.98□□□□□ -2.25
UBA52P62987 RNU6-98P-201ENST00000384173 107 ntBASIC0.98□□□□□ -2.25
UBA52P62987 SNORA22C-201ENST00000384614 134 ntBASIC0.98□□□□□ -2.25
UBA52P62987 MIR520E-201ENST00000384867 87 ntBASIC0.98□□□□□ -2.25
UBA52P62987 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.98□□□□□ -2.25
UBA52P62987 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.98□□□□□ -2.25
UBA52P62987 MTCO1P48-201ENST00000448024 1096 ntBASIC0.98□□□□□ -2.25
UBA52P62987 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.98□□□□□ -2.25
UBA52P62987 AL049714.1-201ENST00000466686 347 ntBASIC0.98□□□□□ -2.25
UBA52P62987 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.98□□□□□ -2.25
UBA52P62987 AC092436.3-201ENST00000511788 257 ntBASIC0.98□□□□□ -2.25
UBA52P62987 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC0.98□□□□□ -2.25
UBA52P62987 AC067904.2-201ENST00000517322 1283 ntBASIC0.98□□□□□ -2.25
UBA52P62987 AC016957.1-201ENST00000534895 309 ntBASIC0.98□□□□□ -2.25
UBA52P62987 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.98□□□□□ -2.25
UBA52P62987 RRN3P3-201ENST00000549207 578 ntBASIC0.98□□□□□ -2.25
UBA52P62987 PSMA3P-201ENST00000555485 635 ntBASIC0.98□□□□□ -2.25
UBA52P62987 AL137100.2-201ENST00000555786 315 ntBASIC0.98□□□□□ -2.25
UBA52P62987 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.98□□□□□ -2.25
UBA52P62987 FAM106DP-201ENST00000586416 501 ntBASIC0.98□□□□□ -2.25
UBA52P62987 AP001269.3-201ENST00000588718 329 ntBASIC0.98□□□□□ -2.25
UBA52P62987 AC022709.1-201ENST00000615967 87 ntBASIC0.98□□□□□ -2.25
UBA52P62987 AL590410.1-201ENST00000617925 333 ntBASIC0.98□□□□□ -2.25
UBA52P62987 AC073968.1-201ENST00000618594 637 ntBASIC0.98□□□□□ -2.25
UBA52P62987 AL445493.3-201ENST00000619568 477 ntBASIC0.98□□□□□ -2.25
UBA52P62987 LINC00216-201ENST00000623548 1126 ntBASIC0.98□□□□□ -2.25
UBA52P62987 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.98□□□□□ -2.25
UBA52P62987 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
UBA52P62987 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.98□□□□□ -2.25
UBA52P62987 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC0.98□□□□□ -2.25
UBA52P62987 SNORD14B-201ENST00000364533 90 ntBASIC0.97□□□□□ -2.25
UBA52P62987 Y_RNA.540-201ENST00000384638 111 ntBASIC0.97□□□□□ -2.25
UBA52P62987 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC0.97□□□□□ -2.25
UBA52P62987 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.97□□□□□ -2.25
UBA52P62987 OFD1P12Y-201ENST00000427963 1207 ntBASIC0.97□□□□□ -2.25
UBA52P62987 TOMM22P2-201ENST00000430735 237 ntBASIC0.97□□□□□ -2.25
UBA52P62987 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.97□□□□□ -2.25
UBA52P62987 CALM1P1-201ENST00000442082 433 ntBASIC0.97□□□□□ -2.25
UBA52P62987 PTENP1-201ENST00000447117 1215 ntBASIC0.97□□□□□ -2.25
UBA52P62987 RPS29P1-201ENST00000465274 159 ntBASIC0.97□□□□□ -2.25
UBA52P62987 AC104164.3-201ENST00000467363 1258 ntBASIC0.97□□□□□ -2.25
UBA52P62987 HMGB1P36-201ENST00000487709 576 ntBASIC0.97□□□□□ -2.25
UBA52P62987 HMGB1P35-201ENST00000503360 598 ntBASIC0.97□□□□□ -2.25
UBA52P62987 AC093852.1-201ENST00000503587 266 ntBASIC0.97□□□□□ -2.25
UBA52P62987 AC034244.1-201ENST00000507687 207 ntBASIC0.97□□□□□ -2.25
UBA52P62987 AC114786.4-201ENST00000508771 728 ntBASIC0.97□□□□□ -2.25
UBA52P62987 AC114797.1-201ENST00000514003 728 ntBASIC0.97□□□□□ -2.25
UBA52P62987 Y_RNA.670-201ENST00000516255 105 ntBASIC0.97□□□□□ -2.25
UBA52P62987 RNA5SP480-201ENST00000516840 109 ntBASIC0.97□□□□□ -2.25
UBA52P62987 AC012435.1-202ENST00000568772 240 ntBASIC0.97□□□□□ -2.25
UBA52P62987 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC0.97□□□□□ -2.25
UBA52P62987 AC103810.9-201ENST00000606688 112 ntBASIC0.97□□□□□ -2.25
UBA52P62987 FRG1HP-204ENST00000617940 757 ntBASIC0.97□□□□□ -2.25
UBA52P62987 AC092192.1-201ENST00000633154 1018 ntBASIC0.97□□□□□ -2.25
UBA52P62987 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.97□□□□□ -2.25
UBA52P62987 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.96□□□□□ -2.25
UBA52P62987 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
UBA52P62987 RNU6-582P-201ENST00000362989 107 ntBASIC0.96□□□□□ -2.26
UBA52P62987 RNU6-1080P-201ENST00000383982 107 ntBASIC0.96□□□□□ -2.26
UBA52P62987 MIR513A1-201ENST00000385138 129 ntBASIC0.96□□□□□ -2.26
UBA52P62987 TAF9BP2-201ENST00000400856 499 ntBASIC0.96□□□□□ -2.26
UBA52P62987 AC023141.4-201ENST00000412031 328 ntBASIC0.96□□□□□ -2.26
UBA52P62987 SRIP3-201ENST00000413200 219 ntBASIC0.96□□□□□ -2.26
UBA52P62987 AC241584.1-201ENST00000438469 1241 ntBASIC0.96□□□□□ -2.26
UBA52P62987 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.96□□□□□ -2.26
UBA52P62987 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.96□□□□□ -2.26
UBA52P62987 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.96□□□□□ -2.26
UBA52P62987 AC079448.1-201ENST00000449377 373 ntBASIC0.96□□□□□ -2.26
UBA52P62987 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.96□□□□□ -2.26
UBA52P62987 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.96□□□□□ -2.26
UBA52P62987 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.96□□□□□ -2.26
UBA52P62987 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC0.96□□□□□ -2.26
UBA52P62987 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC0.96□□□□□ -2.26
UBA52P62987 AC074051.3-201ENST00000570238 358 ntBASIC0.96□□□□□ -2.26
UBA52P62987 MIR3921-201ENST00000577308 85 ntBASIC0.96□□□□□ -2.26
UBA52P62987 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.96□□□□□ -2.26
UBA52P62987 AC018638.7-201ENST00000605836 1114 ntBASIC0.96□□□□□ -2.26
UBA52P62987 AL138478.1-201ENST00000612252 832 ntBASIC0.96□□□□□ -2.26
UBA52P62987 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC0.96□□□□□ -2.26
UBA52P62987 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.96□□□□□ -2.26
UBA52P62987 MIR6515-201ENST00000619843 57 ntBASIC0.96□□□□□ -2.26
UBA52P62987 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.96□□□□□ -2.26
UBA52P62987 AC097655.1-201ENST00000635075 318 ntBASIC0.96□□□□□ -2.26
UBA52P62987 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC0.96□□□□□ -2.26
UBA52P62987 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
UBA52P62987 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
UBA52P62987 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
UBA52P62987 MIR30A-201ENST00000385092 71 ntBASIC0.95□□□□□ -2.26
UBA52P62987 TXNP7-201ENST00000406296 293 ntBASIC0.95□□□□□ -2.26
UBA52P62987 MIR1290-201ENST00000408735 78 ntBASIC0.95□□□□□ -2.26
UBA52P62987 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 153.3 ms