Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC018618.2-201ENST00000604770 446 ntBASIC0.11□□□□□ -2.39
RPL39P62891 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.11□□□□□ -2.39
RPL39P62891 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.1□□□□□ -2.39
RPL39P62891 U3.13-201ENST00000364804 214 ntBASIC0.1□□□□□ -2.39
RPL39P62891 Y_RNA.338-201ENST00000365320 114 ntBASIC0.1□□□□□ -2.39
RPL39P62891 VTRNA1-3-201ENST00000365645 89 ntBASIC0.1□□□□□ -2.39
RPL39P62891 RPL23AP32-201ENST00000395315 459 ntBASIC0.1□□□□□ -2.39
RPL39P62891 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.1□□□□□ -2.39
RPL39P62891 EDDM3CP-201ENST00000415977 425 ntBASIC0.1□□□□□ -2.39
RPL39P62891 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.1□□□□□ -2.39
RPL39P62891 AC234064.1-201ENST00000436312 247 ntBASIC0.1□□□□□ -2.39
RPL39P62891 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC0.1□□□□□ -2.39
RPL39P62891 AL358794.1-201ENST00000445689 381 ntBASIC0.1□□□□□ -2.39
RPL39P62891 AL589880.1-201ENST00000448271 287 ntBASIC0.1□□□□□ -2.39
RPL39P62891 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.1□□□□□ -2.39
RPL39P62891 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC0.1□□□□□ -2.39
RPL39P62891 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.1□□□□□ -2.39
RPL39P62891 RNU6-1053P-201ENST00000515930 101 ntBASIC0.1□□□□□ -2.39
RPL39P62891 SNORD116-28-201ENST00000516123 91 ntBASIC0.1□□□□□ -2.39
RPL39P62891 RNU6-496P-201ENST00000516145 99 ntBASIC0.1□□□□□ -2.39
RPL39P62891 RNU4-54P-201ENST00000516428 129 ntBASIC0.1□□□□□ -2.39
RPL39P62891 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.1□□□□□ -2.39
RPL39P62891 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
RPL39P62891 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.1□□□□□ -2.39
RPL39P62891 MIR4496-201ENST00000635896 61 ntBASIC0.1□□□□□ -2.39
RPL39P62891 AC134026.1-201ENST00000623249 2239 ntBASIC0.09□□□□□ -2.39
RPL39P62891 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.09□□□□□ -2.4
RPL39P62891 RNA5SP327-201ENST00000362494 101 ntBASIC0.09□□□□□ -2.4
RPL39P62891 RNU4-7P-201ENST00000364758 141 ntBASIC0.09□□□□□ -2.4
RPL39P62891 RNU6-16P-201ENST00000384385 107 ntBASIC0.09□□□□□ -2.4
RPL39P62891 U3.29-201ENST00000391296 212 ntBASIC0.09□□□□□ -2.4
RPL39P62891 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
RPL39P62891 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.09□□□□□ -2.4
RPL39P62891 AL513321.1-201ENST00000441175 761 ntBASIC0.09□□□□□ -2.4
RPL39P62891 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.09□□□□□ -2.4
RPL39P62891 AC096992.1-201ENST00000459808 709 ntBASIC0.09□□□□□ -2.4
RPL39P62891 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC0.09□□□□□ -2.4
RPL39P62891 ATP5EP1-201ENST00000510257 156 ntBASIC0.09□□□□□ -2.4
RPL39P62891 RAB11AP2-201ENST00000545905 639 ntBASIC0.09□□□□□ -2.4
RPL39P62891 LINC00557-201ENST00000563184 1279 ntBASIC0.09□□□□□ -2.4
RPL39P62891 MIR5000-201ENST00000577717 103 ntBASIC0.09□□□□□ -2.4
RPL39P62891 AC007620.3-201ENST00000608131 497 ntBASIC0.09□□□□□ -2.4
RPL39P62891 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.09□□□□□ -2.4
RPL39P62891 MTND4P14-201ENST00000435799 1354 ntBASIC0.08□□□□□ -2.4
RPL39P62891 HMGB3P31-201ENST00000413333 595 ntBASIC0.08□□□□□ -2.4
RPL39P62891 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.08□□□□□ -2.4
RPL39P62891 TRIM60P3Y-201ENST00000432201 673 ntBASIC0.08□□□□□ -2.4
RPL39P62891 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
RPL39P62891 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.08□□□□□ -2.4
RPL39P62891 RNA5SP134-201ENST00000516492 96 ntBASIC0.08□□□□□ -2.4
RPL39P62891 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0.08□□□□□ -2.4
RPL39P62891 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.08□□□□□ -2.4
RPL39P62891 AC104984.5-201ENST00000586878 94 ntBASIC0.08□□□□□ -2.4
RPL39P62891 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC0.08□□□□□ -2.4
RPL39P62891 MIR6788-201ENST00000618842 66 ntBASIC0.08□□□□□ -2.4
RPL39P62891 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.08□□□□□ -2.4
RPL39P62891 AC095031.1-201ENST00000623685 672 ntBASIC0.08□□□□□ -2.4
RPL39P62891 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.08□□□□□ -2.4
RPL39P62891 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.07□□□□□ -2.4
RPL39P62891 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.07□□□□□ -2.4
RPL39P62891 MIR767-201ENST00000390228 109 ntBASIC0.07□□□□□ -2.4
RPL39P62891 FTH1P15-201ENST00000406984 280 ntBASIC0.07□□□□□ -2.4
RPL39P62891 MIR1276-201ENST00000408707 83 ntBASIC0.07□□□□□ -2.4
RPL39P62891 USP9YP33-201ENST00000412220 421 ntBASIC0.07□□□□□ -2.4
RPL39P62891 EIF4EP2-201ENST00000422816 654 ntBASIC0.07□□□□□ -2.4
RPL39P62891 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0.07□□□□□ -2.4
RPL39P62891 RPL36AP53-201ENST00000432891 316 ntBASIC0.07□□□□□ -2.4
RPL39P62891 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC0.07□□□□□ -2.4
RPL39P62891 BX248409.1-201ENST00000455497 255 ntBASIC0.07□□□□□ -2.4
RPL39P62891 AC114982.1-201ENST00000469402 321 ntBASIC0.07□□□□□ -2.4
RPL39P62891 RPL21P47-201ENST00000483696 477 ntBASIC0.07□□□□□ -2.4
RPL39P62891 LTV1P1-201ENST00000510683 1237 ntBASIC0.07□□□□□ -2.4
RPL39P62891 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC0.07□□□□□ -2.4
RPL39P62891 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.07□□□□□ -2.4
RPL39P62891 APOOP3-201ENST00000536787 586 ntBASIC0.07□□□□□ -2.4
RPL39P62891 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.07□□□□□ -2.4
RPL39P62891 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.07□□□□□ -2.4
RPL39P62891 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC0.07□□□□□ -2.4
RPL39P62891 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC0.07□□□□□ -2.4
RPL39P62891 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.07□□□□□ -2.4
RPL39P62891 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC0.07□□□□□ -2.4
RPL39P62891 AC016727.2-201ENST00000603988 621 ntBASIC0.07□□□□□ -2.4
RPL39P62891 AC110792.4-201ENST00000609843 298 ntBASIC0.07□□□□□ -2.4
RPL39P62891 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.07□□□□□ -2.4
RPL39P62891 MIR6513-201ENST00000621188 64 ntBASIC0.07□□□□□ -2.4
RPL39P62891 RNU6-707P-201ENST00000364647 95 ntBASIC0.06□□□□□ -2.4
RPL39P62891 MIR608-201ENST00000384820 100 ntBASIC0.06□□□□□ -2.4
RPL39P62891 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
RPL39P62891 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.06□□□□□ -2.4
RPL39P62891 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.06□□□□□ -2.4
RPL39P62891 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC0.06□□□□□ -2.4
RPL39P62891 ARL5AP3-201ENST00000439327 386 ntBASIC0.06□□□□□ -2.4
RPL39P62891 MTCYBP12-201ENST00000440559 1134 ntBASIC0.06□□□□□ -2.4
RPL39P62891 AC080013.2-201ENST00000460866 323 ntBASIC0.06□□□□□ -2.4
RPL39P62891 OR52A4P-202ENST00000481634 799 ntBASIC0.06□□□□□ -2.4
RPL39P62891 RNU6-197P-201ENST00000516680 100 ntBASIC0.06□□□□□ -2.4
RPL39P62891 RNA5SP137-201ENST00000516833 135 ntBASIC0.06□□□□□ -2.4
RPL39P62891 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.06□□□□□ -2.4
RPL39P62891 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
RPL39P62891 AP003034.1-201ENST00000534621 422 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms