Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.88□□□□□ -2.27
RPS28P62857 MIR1267-201ENST00000408723 78 ntBASIC0.88□□□□□ -2.27
RPS28P62857 AC008173.1-201ENST00000418901 264 ntBASIC0.88□□□□□ -2.27
RPS28P62857 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.88□□□□□ -2.27
RPS28P62857 RPL39P6-201ENST00000448289 150 ntBASIC0.88□□□□□ -2.27
RPS28P62857 OR6C5P-201ENST00000452388 923 ntBASIC0.88□□□□□ -2.27
RPS28P62857 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.88□□□□□ -2.27
RPS28P62857 RNU6-775P-201ENST00000459318 96 ntBASIC0.88□□□□□ -2.27
RPS28P62857 RN7SL807P-201ENST00000470923 297 ntBASIC0.88□□□□□ -2.27
RPS28P62857 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC0.88□□□□□ -2.27
RPS28P62857 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC0.88□□□□□ -2.27
RPS28P62857 MTCYBP43-201ENST00000513621 740 ntBASIC0.88□□□□□ -2.27
RPS28P62857 MTND4LP31-201ENST00000514859 294 ntBASIC0.88□□□□□ -2.27
RPS28P62857 IGKV3-31-201ENST00000523109 329 ntBASIC0.88□□□□□ -2.27
RPS28P62857 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.88□□□□□ -2.27
RPS28P62857 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.88□□□□□ -2.27
RPS28P62857 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC0.88□□□□□ -2.27
RPS28P62857 BNIP3P27-201ENST00000599991 412 ntBASIC0.88□□□□□ -2.27
RPS28P62857 AL606834.2-201ENST00000602954 668 ntBASIC0.88□□□□□ -2.27
RPS28P62857 AC245100.7-201ENST00000609678 442 ntBASIC0.88□□□□□ -2.27
RPS28P62857 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC0.88□□□□□ -2.27
RPS28P62857 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.88□□□□□ -2.27
RPS28P62857 WDR75-207ENST00000631047 270 ntTSL 5 BASIC0.88□□□□□ -2.27
RPS28P62857 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
RPS28P62857 AC092125.1-201ENST00000562568 1995 ntBASIC0.87□□□□□ -2.27
RPS28P62857 AC138393.1-203ENST00000327086 343 ntBASIC0.87□□□□□ -2.27
RPS28P62857 RNU6-1167P-201ENST00000363227 94 ntBASIC0.87□□□□□ -2.27
RPS28P62857 RNU6-414P-201ENST00000363705 104 ntBASIC0.87□□□□□ -2.27
RPS28P62857 RNU6-1280P-201ENST00000365211 107 ntBASIC0.87□□□□□ -2.27
RPS28P62857 MIR758-201ENST00000390227 88 ntBASIC0.87□□□□□ -2.27
RPS28P62857 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
RPS28P62857 RN7SKP284-201ENST00000411002 343 ntBASIC0.87□□□□□ -2.27
RPS28P62857 RNU2-32P-201ENST00000411193 191 ntBASIC0.87□□□□□ -2.27
RPS28P62857 AC107081.1-201ENST00000414975 361 ntBASIC0.87□□□□□ -2.27
RPS28P62857 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
RPS28P62857 GPM6BP2-201ENST00000432046 144 ntBASIC0.87□□□□□ -2.27
RPS28P62857 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC0.87□□□□□ -2.27
RPS28P62857 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC0.87□□□□□ -2.27
RPS28P62857 USP9YP22-201ENST00000438971 294 ntBASIC0.87□□□□□ -2.27
RPS28P62857 AC044797.1-201ENST00000445744 679 ntBASIC0.87□□□□□ -2.27
RPS28P62857 GPM6BP1-201ENST00000446387 144 ntBASIC0.87□□□□□ -2.27
RPS28P62857 RPS29P28-201ENST00000446439 141 ntBASIC0.87□□□□□ -2.27
RPS28P62857 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
RPS28P62857 RPL30P7-201ENST00000479312 323 ntBASIC0.87□□□□□ -2.27
RPS28P62857 RNU6-927P-201ENST00000516199 100 ntBASIC0.87□□□□□ -2.27
RPS28P62857 Y_RNA.675-201ENST00000516389 149 ntBASIC0.87□□□□□ -2.27
RPS28P62857 RNA5SP61-201ENST00000516453 100 ntBASIC0.87□□□□□ -2.27
RPS28P62857 RNU6-678P-201ENST00000516832 109 ntBASIC0.87□□□□□ -2.27
RPS28P62857 SNORA31.17-201ENST00000516953 127 ntBASIC0.87□□□□□ -2.27
RPS28P62857 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC0.87□□□□□ -2.27
RPS28P62857 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC0.87□□□□□ -2.27
RPS28P62857 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC0.87□□□□□ -2.27
RPS28P62857 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC0.87□□□□□ -2.27
RPS28P62857 AC068790.3-201ENST00000602988 553 ntBASIC0.87□□□□□ -2.27
RPS28P62857 AC004492.1-201ENST00000607036 742 ntBASIC0.87□□□□□ -2.27
RPS28P62857 AC034229.4-201ENST00000607861 441 ntBASIC0.87□□□□□ -2.27
RPS28P62857 AC009237.15-201ENST00000610252 501 ntBASIC0.87□□□□□ -2.27
RPS28P62857 AC005962.2-201ENST00000611427 652 ntBASIC0.87□□□□□ -2.27
RPS28P62857 AC018445.2-201ENST00000622987 260 ntBASIC0.87□□□□□ -2.27
RPS28P62857 AC092608.2-201ENST00000624427 218 ntBASIC0.87□□□□□ -2.27
RPS28P62857 AP000560.1-201ENST00000624150 1937 ntBASIC0.86□□□□□ -2.27
RPS28P62857 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
RPS28P62857 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC0.86□□□□□ -2.27
RPS28P62857 NACAP2-201ENST00000318548 624 ntBASIC0.86□□□□□ -2.27
RPS28P62857 Y_RNA.234-201ENST00000364409 97 ntBASIC0.86□□□□□ -2.27
RPS28P62857 RNU6-1164P-201ENST00000364428 107 ntBASIC0.86□□□□□ -2.27
RPS28P62857 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC0.86□□□□□ -2.27
RPS28P62857 RNU6-611P-201ENST00000384276 104 ntBASIC0.86□□□□□ -2.27
RPS28P62857 Y_RNA.548-201ENST00000384656 105 ntBASIC0.86□□□□□ -2.27
RPS28P62857 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
RPS28P62857 AL138885.1-201ENST00000405921 675 ntBASIC0.86□□□□□ -2.27
RPS28P62857 EEF1A1P41-201ENST00000414667 207 ntBASIC0.86□□□□□ -2.27
RPS28P62857 AL445669.1-201ENST00000426743 755 ntBASIC0.86□□□□□ -2.27
RPS28P62857 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.86□□□□□ -2.27
RPS28P62857 MTCO1P44-201ENST00000441935 243 ntBASIC0.86□□□□□ -2.27
RPS28P62857 DYNLT3P2-201ENST00000442517 295 ntBASIC0.86□□□□□ -2.27
RPS28P62857 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC0.86□□□□□ -2.27
RPS28P62857 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC0.86□□□□□ -2.27
RPS28P62857 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC0.86□□□□□ -2.27
RPS28P62857 AP001025.1-201ENST00000486139 332 ntBASIC0.86□□□□□ -2.27
RPS28P62857 AL133373.1-201ENST00000497098 94 ntBASIC0.86□□□□□ -2.27
RPS28P62857 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.86□□□□□ -2.27
RPS28P62857 AC008628.1-201ENST00000508663 265 ntBASIC0.86□□□□□ -2.27
RPS28P62857 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.86□□□□□ -2.27
RPS28P62857 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC0.86□□□□□ -2.27
RPS28P62857 RNA5SP320-201ENST00000516263 124 ntBASIC0.86□□□□□ -2.27
RPS28P62857 RNU6-703P-201ENST00000516946 107 ntBASIC0.86□□□□□ -2.27
RPS28P62857 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC0.86□□□□□ -2.27
RPS28P62857 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC0.86□□□□□ -2.27
RPS28P62857 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
RPS28P62857 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC0.86□□□□□ -2.27
RPS28P62857 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC0.86□□□□□ -2.27
RPS28P62857 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.86□□□□□ -2.27
RPS28P62857 AC104229.1-201ENST00000561364 255 ntBASIC0.86□□□□□ -2.27
RPS28P62857 AF038458.1-201ENST00000588406 262 ntBASIC0.86□□□□□ -2.27
RPS28P62857 AF230666.2-201ENST00000602328 725 ntBASIC0.86□□□□□ -2.27
RPS28P62857 AL390208.1-201ENST00000605885 644 ntBASIC0.86□□□□□ -2.27
RPS28P62857 AC004908.3-201ENST00000610248 625 ntBASIC0.86□□□□□ -2.27
RPS28P62857 RMST_6.1-201ENST00000611980 203 ntBASIC0.86□□□□□ -2.27
RPS28P62857 AC021755.4-201ENST00000616620 456 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms