Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 MIR3167-201ENST00000579623 85 ntBASIC1.08□□□□□ -2.24
LSM3P62310 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.08□□□□□ -2.24
LSM3P62310 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.08□□□□□ -2.24
LSM3P62310 AC106730.3-201ENST00000624568 641 ntBASIC1.08□□□□□ -2.24
LSM3P62310 AC080188.3-201ENST00000624842 748 ntBASIC1.08□□□□□ -2.24
LSM3P62310 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
LSM3P62310 AL161722.3-201ENST00000605789 2983 ntBASIC1.08□□□□□ -2.24
LSM3P62310 RNU1-23P-201ENST00000363361 144 ntBASIC1.07□□□□□ -2.24
LSM3P62310 SNORD115-48-201ENST00000364764 76 ntBASIC1.07□□□□□ -2.24
LSM3P62310 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.07□□□□□ -2.24
LSM3P62310 RNU4-26P-201ENST00000410270 107 ntBASIC1.07□□□□□ -2.24
LSM3P62310 RNU2-28P-201ENST00000410457 189 ntBASIC1.07□□□□□ -2.24
LSM3P62310 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.07□□□□□ -2.24
LSM3P62310 BTF3P8-201ENST00000414577 526 ntBASIC1.07□□□□□ -2.24
LSM3P62310 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.07□□□□□ -2.24
LSM3P62310 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.07□□□□□ -2.24
LSM3P62310 AL590233.1-201ENST00000430017 456 ntBASIC1.07□□□□□ -2.24
LSM3P62310 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.07□□□□□ -2.24
LSM3P62310 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.07□□□□□ -2.24
LSM3P62310 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.07□□□□□ -2.24
LSM3P62310 AC005908.1-201ENST00000468701 347 ntBASIC1.07□□□□□ -2.24
LSM3P62310 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.07□□□□□ -2.24
LSM3P62310 AC004223.1-201ENST00000479840 271 ntBASIC1.07□□□□□ -2.24
LSM3P62310 AL049873.1-201ENST00000480540 376 ntBASIC1.07□□□□□ -2.24
LSM3P62310 CKS1BP2-201ENST00000497342 240 ntBASIC1.07□□□□□ -2.24
LSM3P62310 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.07□□□□□ -2.24
LSM3P62310 MTND4P2-201ENST00000507767 1203 ntBASIC1.07□□□□□ -2.24
LSM3P62310 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.07□□□□□ -2.24
LSM3P62310 RNU6-362P-201ENST00000516736 90 ntBASIC1.07□□□□□ -2.24
LSM3P62310 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.07□□□□□ -2.24
LSM3P62310 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.07□□□□□ -2.24
LSM3P62310 MTCO2P15-201ENST00000532655 656 ntBASIC1.07□□□□□ -2.24
LSM3P62310 AC006199.1-201ENST00000548728 219 ntBASIC1.07□□□□□ -2.24
LSM3P62310 IMMP1LP2-201ENST00000552954 492 ntBASIC1.07□□□□□ -2.24
LSM3P62310 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.07□□□□□ -2.24
LSM3P62310 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.07□□□□□ -2.24
LSM3P62310 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.07□□□□□ -2.24
LSM3P62310 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.07□□□□□ -2.24
LSM3P62310 ROCK1P1-201ENST00000573767 549 ntBASIC1.07□□□□□ -2.24
LSM3P62310 MIR4672-201ENST00000583126 81 ntBASIC1.07□□□□□ -2.24
LSM3P62310 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.07□□□□□ -2.24
LSM3P62310 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.07□□□□□ -2.24
LSM3P62310 AL035411.2-201ENST00000604022 421 ntBASIC1.07□□□□□ -2.24
LSM3P62310 AC069304.2-201ENST00000605154 435 ntBASIC1.07□□□□□ -2.24
LSM3P62310 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC1.07□□□□□ -2.24
LSM3P62310 RMST_6.1-201ENST00000611980 203 ntBASIC1.07□□□□□ -2.24
LSM3P62310 AL118556.2-201ENST00000614375 824 ntBASIC1.07□□□□□ -2.24
LSM3P62310 AL109620.1-201ENST00000618738 1197 ntBASIC1.07□□□□□ -2.24
LSM3P62310 U2.21-201ENST00000637295 81 ntBASIC1.07□□□□□ -2.24
LSM3P62310 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
LSM3P62310 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
LSM3P62310 AP005901.5-201ENST00000545779 1796 ntBASIC1.06□□□□□ -2.24
LSM3P62310 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
LSM3P62310 ZNF849P-201ENST00000594711 1566 ntBASIC1.06□□□□□ -2.24
LSM3P62310 MIR26B-201ENST00000362251 77 ntBASIC1.06□□□□□ -2.24
LSM3P62310 RNU6-778P-201ENST00000363269 103 ntBASIC1.06□□□□□ -2.24
LSM3P62310 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.06□□□□□ -2.24
LSM3P62310 RNA5SP212-201ENST00000391223 107 ntBASIC1.06□□□□□ -2.24
LSM3P62310 AC078974.1-201ENST00000411597 223 ntBASIC1.06□□□□□ -2.24
LSM3P62310 OR6C66P-201ENST00000414917 930 ntBASIC1.06□□□□□ -2.24
LSM3P62310 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.06□□□□□ -2.24
LSM3P62310 RPS24P7-201ENST00000416921 246 ntBASIC1.06□□□□□ -2.24
LSM3P62310 RPL30P13-201ENST00000418873 348 ntBASIC1.06□□□□□ -2.24
LSM3P62310 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.06□□□□□ -2.24
LSM3P62310 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.06□□□□□ -2.24
LSM3P62310 HMGB1P31-201ENST00000437242 427 ntBASIC1.06□□□□□ -2.24
LSM3P62310 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.06□□□□□ -2.24
LSM3P62310 RPS20P20-201ENST00000460498 340 ntBASIC1.06□□□□□ -2.24
LSM3P62310 RPL32P14-201ENST00000463196 378 ntBASIC1.06□□□□□ -2.24
LSM3P62310 FAM92A1P2-202ENST00000504766 877 ntBASIC1.06□□□□□ -2.24
LSM3P62310 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.06□□□□□ -2.24
LSM3P62310 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.06□□□□□ -2.24
LSM3P62310 YWHAZP1-201ENST00000556286 722 ntBASIC1.06□□□□□ -2.24
LSM3P62310 SUB1P3-201ENST00000564581 315 ntBASIC1.06□□□□□ -2.24
LSM3P62310 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.06□□□□□ -2.24
LSM3P62310 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.06□□□□□ -2.24
LSM3P62310 BNIP3P24-201ENST00000593398 557 ntBASIC1.06□□□□□ -2.24
LSM3P62310 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.06□□□□□ -2.24
LSM3P62310 AP001485.1-201ENST00000604799 199 ntBASIC1.06□□□□□ -2.24
LSM3P62310 AC004009.2-201ENST00000623016 728 ntBASIC1.06□□□□□ -2.24
LSM3P62310 AC087821.2-201ENST00000637086 450 ntBASIC1.06□□□□□ -2.24
LSM3P62310 U6.101-201ENST00000637707 76 ntBASIC1.06□□□□□ -2.24
LSM3P62310 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.06□□□□□ -2.24
LSM3P62310 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.06□□□□□ -2.24
LSM3P62310 Z75746.1-201ENST00000440243 2080 ntBASIC1.06□□□□□ -2.24
LSM3P62310 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
LSM3P62310 AC002543.1-201ENST00000299783 1954 ntBASIC1.05□□□□□ -2.24
LSM3P62310 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.05□□□□□ -2.24
LSM3P62310 U8.2-201ENST00000363156 134 ntBASIC1.05□□□□□ -2.24
LSM3P62310 SNORA62.1-201ENST00000364287 154 ntBASIC1.05□□□□□ -2.24
LSM3P62310 RN7SKP192-201ENST00000411291 327 ntBASIC1.05□□□□□ -2.24
LSM3P62310 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.05□□□□□ -2.24
LSM3P62310 BOLA3P4-201ENST00000418151 400 ntBASIC1.05□□□□□ -2.24
LSM3P62310 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC1.05□□□□□ -2.24
LSM3P62310 FAM204CP-201ENST00000424489 642 ntBASIC1.05□□□□□ -2.24
LSM3P62310 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.05□□□□□ -2.24
LSM3P62310 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.05□□□□□ -2.24
LSM3P62310 MTND2P5-201ENST00000432656 1006 ntBASIC1.05□□□□□ -2.24
LSM3P62310 AL161651.1-201ENST00000440882 223 ntBASIC1.05□□□□□ -2.24
LSM3P62310 VN1R10P-201ENST00000447106 875 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms